RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 C12orf43Q96C57 262 aaKnown RBP17.48■□□□□ 0.39
MAP1LC3A-202ENST00000374837 CCL13Q99616 98 aa17.48■□□□□ 0.39
MAP1LC3A-202ENST00000374837 SNTG1Q9NSN8 517 aa17.48■□□□□ 0.39
MAP1LC3A-202ENST00000374837 PAK1IP1Q9NWT1 392 aaPredicted RBP17.48■□□□□ 0.39
MAP1LC3A-202ENST00000374837 DNAJB11Q9UBS4 358 aa17.48■□□□□ 0.39
MAP1LC3A-202ENST00000374837 SONP18583 2426 aaKnown RBP17.48■□□□□ 0.39
MAP1LC3A-202ENST00000374837 COL6A5A8TX70 2615 aa17.47■□□□□ 0.39
MAP1LC3A-202ENST00000374837 A0A0G2JMP0 313 aa17.47■□□□□ 0.39
MAP1LC3A-202ENST00000374837 A0A0X1KG70 313 aa17.47■□□□□ 0.39
MAP1LC3A-202ENST00000374837 AMY2BP19961 511 aa17.47■□□□□ 0.39
MAP1LC3A-202ENST00000374837 MPZP25189 248 aa17.47■□□□□ 0.39
MAP1LC3A-202ENST00000374837 DCAF12L2Q5VW00 463 aa17.47■□□□□ 0.39
MAP1LC3A-202ENST00000374837 RNLSQ5VYX0 342 aa17.47■□□□□ 0.39
MAP1LC3A-202ENST00000374837 DMKNQ6E0U4 476 aaPredicted RBP17.47■□□□□ 0.39
MAP1LC3A-202ENST00000374837 OR4M2Q8NGB6 313 aa17.47■□□□□ 0.39
MAP1LC3A-202ENST00000374837 MYDGFQ969H8 173 aa17.47■□□□□ 0.39
MAP1LC3A-202ENST00000374837 BORCS8Q96FH0 119 aa17.47■□□□□ 0.39
MAP1LC3A-202ENST00000374837 CNBD2Q96M20 576 aa17.47■□□□□ 0.39
MAP1LC3A-202ENST00000374837 ZNF488Q96MN9 340 aa17.47■□□□□ 0.39
MAP1LC3A-202ENST00000374837 TMPRSS13Q9BYE2 586 aa17.47■□□□□ 0.39
MAP1LC3A-202ENST00000374837 PKIBQ9C010 78 aa17.47■□□□□ 0.39
MAP1LC3A-202ENST00000374837 RASSF4Q9H2L5 321 aa17.47■□□□□ 0.39
MAP1LC3A-202ENST00000374837 KAAG1Q9UBP8 84 aa17.47■□□□□ 0.39
MAP1LC3A-202ENST00000374837 CLN8Q9UBY8 286 aa17.47■□□□□ 0.39
MAP1LC3A-202ENST00000374837 DHDHQ9UQ10 334 aa17.47■□□□□ 0.39
MAP1LC3A-202ENST00000374837 ERGIC3Q9Y282 383 aa17.47■□□□□ 0.39
MAP1LC3A-202ENST00000374837 TPRKBQ9Y3C4 175 aa17.47■□□□□ 0.39
MAP1LC3A-202ENST00000374837 PCDHGB5Q9Y5G0 923 aa17.47■□□□□ 0.39
MAP1LC3A-202ENST00000374837 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.47■□□□□ 0.39
MAP1LC3A-202ENST00000374837 MYL12BO14950 172 aa17.46■□□□□ 0.39
MAP1LC3A-202ENST00000374837 AVPP01185 164 aa17.46■□□□□ 0.39
MAP1LC3A-202ENST00000374837 HNF1AP20823 631 aa17.46■□□□□ 0.39
MAP1LC3A-202ENST00000374837 SLC35A2P78381 396 aa17.46■□□□□ 0.39
MAP1LC3A-202ENST00000374837 DOC2BQ14184 412 aa17.46■□□□□ 0.39
MAP1LC3A-202ENST00000374837 ATPAF1Q5TC12 328 aaPredicted RBP17.46■□□□□ 0.39
MAP1LC3A-202ENST00000374837 STUMQ69YW2 141 aa17.46■□□□□ 0.39
MAP1LC3A-202ENST00000374837 ZFP41Q8N8Y5 198 aa17.46■□□□□ 0.39
MAP1LC3A-202ENST00000374837 POC1AQ8NBT0 407 aa17.46■□□□□ 0.39
MAP1LC3A-202ENST00000374837 DNAAF1Q8NEP3 725 aa17.46■□□□□ 0.39
MAP1LC3A-202ENST00000374837 SPATA3Q8NHX4 192 aa17.46■□□□□ 0.39
MAP1LC3A-202ENST00000374837 TSEN15Q8WW01 171 aaKnown RBP17.46■□□□□ 0.39
MAP1LC3A-202ENST00000374837 TMIGD2Q96BF3 282 aa17.46■□□□□ 0.39
MAP1LC3A-202ENST00000374837 SMIM19Q96E16 107 aa17.46■□□□□ 0.39
MAP1LC3A-202ENST00000374837 CDCA4Q9BXL8 241 aa17.46■□□□□ 0.39
MAP1LC3A-202ENST00000374837 DUSP21Q9H596 190 aa17.46■□□□□ 0.39
MAP1LC3A-202ENST00000374837 ZCCHC4Q9H5U6 513 aa17.46■□□□□ 0.39
MAP1LC3A-202ENST00000374837 NLKQ9UBE8 527 aa17.46■□□□□ 0.39
MAP1LC3A-202ENST00000374837 OR5V1Q9UGF6 321 aa17.46■□□□□ 0.39
MAP1LC3A-202ENST00000374837 POLDIP2Q9Y2S7 368 aa17.46■□□□□ 0.39
MAP1LC3A-202ENST00000374837 ZNF281Q9Y2X9 895 aa17.46■□□□□ 0.39
MAP1LC3A-202ENST00000374837 A0A1B0GW55 424 aa17.45■□□□□ 0.38
MAP1LC3A-202ENST00000374837 J3QLI3 93 aa17.45■□□□□ 0.38
MAP1LC3A-202ENST00000374837 TMPRSS2O15393 492 aa17.45■□□□□ 0.38
MAP1LC3A-202ENST00000374837 NOS1APO75052 506 aaPredicted RBP17.45■□□□□ 0.38
MAP1LC3A-202ENST00000374837 FCN3O75636 299 aa17.45■□□□□ 0.38
MAP1LC3A-202ENST00000374837 DUX4L2P0CJ85 424 aa17.45■□□□□ 0.38
MAP1LC3A-202ENST00000374837 DUX4L3P0CJ86 424 aa17.45■□□□□ 0.38
MAP1LC3A-202ENST00000374837 DUX4L4P0CJ87 422 aa17.45■□□□□ 0.38
MAP1LC3A-202ENST00000374837 DUX4L5P0CJ88 424 aa17.45■□□□□ 0.38
MAP1LC3A-202ENST00000374837 DUX4L6P0CJ89 424 aa17.45■□□□□ 0.38
MAP1LC3A-202ENST00000374837 DUX4L7P0CJ90 424 aa17.45■□□□□ 0.38
MAP1LC3A-202ENST00000374837 PGA5P0DJD9 388 aa17.45■□□□□ 0.38
MAP1LC3A-202ENST00000374837 PRKACBP22694 351 aa17.45■□□□□ 0.38
MAP1LC3A-202ENST00000374837 GATA3P23771 443 aa17.45■□□□□ 0.38
MAP1LC3A-202ENST00000374837 AZGP1P25311 298 aaKnown RBP17.45■□□□□ 0.38
MAP1LC3A-202ENST00000374837 SOX2P48431 317 aa17.45■□□□□ 0.38
MAP1LC3A-202ENST00000374837 NPY4RP50391 375 aa17.45■□□□□ 0.38
MAP1LC3A-202ENST00000374837 ATP1B3P54709 279 aa17.45■□□□□ 0.38
MAP1LC3A-202ENST00000374837 WNT4P56705 351 aa17.45■□□□□ 0.38
MAP1LC3A-202ENST00000374837 PAX2Q02962 417 aa17.45■□□□□ 0.38
MAP1LC3A-202ENST00000374837 DUX4L9Q6RFH8 374 aaPredicted RBP17.45■□□□□ 0.38
MAP1LC3A-202ENST00000374837 C1orf229Q6ZS94 237 aaPredicted RBP17.45■□□□□ 0.38
MAP1LC3A-202ENST00000374837 SERPINA12Q8IW75 414 aa17.45■□□□□ 0.38
MAP1LC3A-202ENST00000374837 PARP16Q8N5Y8 322 aa17.45■□□□□ 0.38
MAP1LC3A-202ENST00000374837 OR13C9Q8NGT0 318 aa17.45■□□□□ 0.38
MAP1LC3A-202ENST00000374837 ANGPTL6Q8NI99 470 aa17.45■□□□□ 0.38
MAP1LC3A-202ENST00000374837 GPR148Q8TDV2 347 aa17.45■□□□□ 0.38
MAP1LC3A-202ENST00000374837 GHSRQ92847 366 aa17.45■□□□□ 0.38
MAP1LC3A-202ENST00000374837 SMURF1Q9HCE7 757 aa17.45■□□□□ 0.38
MAP1LC3A-202ENST00000374837 RASL12Q9NYN1 266 aa17.45■□□□□ 0.38
MAP1LC3A-202ENST00000374837 DUX4Q9UBX2 424 aa17.45■□□□□ 0.38
MAP1LC3A-202ENST00000374837 INSIG2Q9Y5U4 225 aa17.45■□□□□ 0.38
MAP1LC3A-202ENST00000374837 FBN1P35555 2871 aaKnown RBP17.45■□□□□ 0.38
MAP1LC3A-202ENST00000374837 TFF1P04155 84 aa17.44■□□□□ 0.38
MAP1LC3A-202ENST00000374837 ACAA1P09110 424 aaPredicted RBP17.44■□□□□ 0.38
MAP1LC3A-202ENST00000374837 CRHBPP24387 322 aa17.44■□□□□ 0.38
MAP1LC3A-202ENST00000374837 RBP2P50120 134 aa17.44■□□□□ 0.38
MAP1LC3A-202ENST00000374837 TAS2R43P59537 309 aa17.44■□□□□ 0.38
MAP1LC3A-202ENST00000374837 IL24Q13007 206 aa17.44■□□□□ 0.38
MAP1LC3A-202ENST00000374837 ACP7Q6ZNF0 438 aa17.44■□□□□ 0.38
MAP1LC3A-202ENST00000374837 SLC36A1Q7Z2H8 476 aa17.44■□□□□ 0.38
MAP1LC3A-202ENST00000374837 OR5D14Q8NGL3 314 aa17.44■□□□□ 0.38
MAP1LC3A-202ENST00000374837 RAB40AQ8WXH6 277 aa17.44■□□□□ 0.38
MAP1LC3A-202ENST00000374837 SPSB1Q96BD6 273 aa17.44■□□□□ 0.38
MAP1LC3A-202ENST00000374837 ZNF184Q99676 751 aaPredicted RBP17.44■□□□□ 0.38
MAP1LC3A-202ENST00000374837 NRIP2Q9BQI9 281 aa17.44■□□□□ 0.38
MAP1LC3A-202ENST00000374837 C7orf69Q9H7B7 122 aa17.44■□□□□ 0.38
MAP1LC3A-202ENST00000374837 LOC105371242A0A075B767 164 aa17.43■□□□□ 0.38
MAP1LC3A-202ENST00000374837 OR2AT4A6NND4 320 aa17.43■□□□□ 0.38
MAP1LC3A-202ENST00000374837 DVL1O14640 695 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms