RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 PDZD9Q8IXQ8 264 aa9.01□□□□□ -0.97
COL5A1-202ENST00000371820 C17orf78Q8N4C9 275 aa9.01□□□□□ -0.97
COL5A1-202ENST00000371820 C12orf45Q8N5I9 185 aaPredicted RBP9.01□□□□□ -0.97
COL5A1-202ENST00000371820 RFLNBQ8N5W9 214 aa9.01□□□□□ -0.97
COL5A1-202ENST00000371820 ZDHHC22Q8N966 263 aa9.01□□□□□ -0.97
COL5A1-202ENST00000371820 OR10H5Q8NGA6 315 aa9.01□□□□□ -0.97
COL5A1-202ENST00000371820 OR9K2Q8NGE7 335 aa9.01□□□□□ -0.97
COL5A1-202ENST00000371820 OR52N5Q8NH56 324 aa9.01□□□□□ -0.97
COL5A1-202ENST00000371820 FBXW5Q969U6 566 aa9.01□□□□□ -0.97
COL5A1-202ENST00000371820 RNF166Q96A37 237 aaPredicted RBP9.01□□□□□ -0.97
COL5A1-202ENST00000371820 PHYHIPLQ96FC7 376 aa9.01□□□□□ -0.97
COL5A1-202ENST00000371820 SYT4Q9H2B2 425 aa9.01□□□□□ -0.97
COL5A1-202ENST00000371820 MOB1AQ9H8S9 216 aa9.01□□□□□ -0.97
COL5A1-202ENST00000371820 TMEM138Q9NPI0 162 aa9.01□□□□□ -0.97
COL5A1-202ENST00000371820 FBLN5Q9UBX5 448 aa9.01□□□□□ -0.97
COL5A1-202ENST00000371820 RAI1Q7Z5J4 1906 aaPredicted RBP9.01□□□□□ -0.97
COL5A1-202ENST00000371820 ARID1AO14497 2285 aa9□□□□□ -0.97
COL5A1-202ENST00000371820 IGLV1-36A0A0B4J1U3 117 aa9□□□□□ -0.97
COL5A1-202ENST00000371820 LOC390937A0A1W2PQ73 354 aa9□□□□□ -0.97
COL5A1-202ENST00000371820 hCG_1807616A0A1W2PRN6 198 aa9□□□□□ -0.97
COL5A1-202ENST00000371820 TVP23AA6NH52 213 aa9□□□□□ -0.97
COL5A1-202ENST00000371820 NUDT19A8MXV4 375 aa9□□□□□ -0.97
COL5A1-202ENST00000371820 OR2F2O95006 317 aa9□□□□□ -0.97
COL5A1-202ENST00000371820 AKR7A3O95154 331 aa9□□□□□ -0.97
COL5A1-202ENST00000371820 BPNT1O95861 308 aa9□□□□□ -0.97
COL5A1-202ENST00000371820 IGHV3-9P01782 118 aa9□□□□□ -0.97
COL5A1-202ENST00000371820 UBBP0CG47 229 aa9□□□□□ -0.97
COL5A1-202ENST00000371820 MGMTP16455 207 aa9□□□□□ -0.97
COL5A1-202ENST00000371820 CBX5P45973 191 aa9□□□□□ -0.97
COL5A1-202ENST00000371820 SELENOPP49908 381 aa9□□□□□ -0.97
COL5A1-202ENST00000371820 MMP16P51512 607 aa9□□□□□ -0.97
COL5A1-202ENST00000371820 TAS2R31P59538 309 aa9□□□□□ -0.97
COL5A1-202ENST00000371820 RPS27AP62979 156 aaKnown RBP9□□□□□ -0.97
COL5A1-202ENST00000371820 UBA52P62987 128 aaKnown RBP9□□□□□ -0.97
COL5A1-202ENST00000371820 OR2F1Q13607 317 aa9□□□□□ -0.97
COL5A1-202ENST00000371820 GK2Q14410 553 aaPredicted RBP9□□□□□ -0.97
COL5A1-202ENST00000371820 PCK2Q16822 640 aa9□□□□□ -0.97
COL5A1-202ENST00000371820 C4orf46Q504U0 113 aa9□□□□□ -0.97
COL5A1-202ENST00000371820 ACTBL2Q562R1 376 aa9□□□□□ -0.97
COL5A1-202ENST00000371820 WDR38Q5JTN6 314 aa9□□□□□ -0.97
COL5A1-202ENST00000371820 TOR2AQ5JU69 321 aa9□□□□□ -0.97
COL5A1-202ENST00000371820 C11orf88Q6PI97 169 aa9□□□□□ -0.97
COL5A1-202ENST00000371820 TMEM108Q6UXF1 575 aa9□□□□□ -0.97
COL5A1-202ENST00000371820 Q6ZTK2 550 aa9□□□□□ -0.97
COL5A1-202ENST00000371820 AAED1Q7RTV5 226 aa9□□□□□ -0.97
COL5A1-202ENST00000371820 ZC3HAV1Q7Z2W4 902 aaKnown RBP9□□□□□ -0.97
COL5A1-202ENST00000371820 HSD17B13Q7Z5P4 300 aaPredicted RBP9□□□□□ -0.97
COL5A1-202ENST00000371820 GPAT4Q86UL3 456 aa9□□□□□ -0.97
COL5A1-202ENST00000371820 PRSS35Q8N3Z0 413 aa9□□□□□ -0.97
COL5A1-202ENST00000371820 SPERTQ8NA61 448 aa9□□□□□ -0.97
COL5A1-202ENST00000371820 ADPRHL1Q8NDY3 354 aa9□□□□□ -0.97
COL5A1-202ENST00000371820 OR51D1Q8NGF3 324 aa9□□□□□ -0.97
COL5A1-202ENST00000371820 OR5D14Q8NGL3 314 aa9□□□□□ -0.97
COL5A1-202ENST00000371820 OR4C16Q8NGL9 310 aa9□□□□□ -0.97
COL5A1-202ENST00000371820 FAM46BQ96A09 425 aa9□□□□□ -0.97
COL5A1-202ENST00000371820 ELMOD3Q96FG2 381 aa9□□□□□ -0.97
COL5A1-202ENST00000371820 SLC25A44Q96H78 314 aaPredicted RBP9□□□□□ -0.97
COL5A1-202ENST00000371820 TTTY10Q9BZA0 68 aa9□□□□□ -0.97
COL5A1-202ENST00000371820 SLC2A8Q9NY64 477 aa9□□□□□ -0.97
COL5A1-202ENST00000371820 MRPL15Q9P015 296 aaKnown RBP9□□□□□ -0.97
COL5A1-202ENST00000371820 PIPOXQ9P0Z9 390 aa9□□□□□ -0.97
COL5A1-202ENST00000371820 OPN4Q9UHM6 478 aa9□□□□□ -0.97
COL5A1-202ENST00000371820 B3GALT5Q9Y2C3 310 aa9□□□□□ -0.97
COL5A1-202ENST00000371820 AMDHD2Q9Y303 409 aa9□□□□□ -0.97
COL5A1-202ENST00000371820 RPS10-NUDT3A0A1W2PQS6 291 aa8.99□□□□□ -0.97
COL5A1-202ENST00000371820 ZSCAN5BA6NJL1 495 aa8.99□□□□□ -0.97
COL5A1-202ENST00000371820 ZNF736B4DX44 427 aaPredicted RBP8.99□□□□□ -0.97
COL5A1-202ENST00000371820 H7C1Q1 480 aa8.99□□□□□ -0.97
COL5A1-202ENST00000371820 RAMP1O60894 148 aa8.99□□□□□ -0.97
COL5A1-202ENST00000371820 LY6G6DO95868 133 aa8.99□□□□□ -0.97
COL5A1-202ENST00000371820 PLAUP00749 431 aa8.99□□□□□ -0.97
COL5A1-202ENST00000371820 CD74P04233 296 aa8.99□□□□□ -0.97
COL5A1-202ENST00000371820 SPARCP09486 303 aa8.99□□□□□ -0.97
COL5A1-202ENST00000371820 H2BFMP0C1H6 154 aa8.99□□□□□ -0.97
COL5A1-202ENST00000371820 SLC25A4P12235 298 aa8.99□□□□□ -0.97
COL5A1-202ENST00000371820 PAX1P15863 534 aa8.99□□□□□ -0.97
COL5A1-202ENST00000371820 ZNF43P17038 809 aa8.99□□□□□ -0.97
COL5A1-202ENST00000371820 ZP3P21754 424 aa8.99□□□□□ -0.97
COL5A1-202ENST00000371820 PTAFRP25105 342 aa8.99□□□□□ -0.97
COL5A1-202ENST00000371820 MPGP29372 298 aa8.99□□□□□ -0.97
COL5A1-202ENST00000371820 GRPRP30550 384 aa8.99□□□□□ -0.97
COL5A1-202ENST00000371820 KIR3DL2P43630 455 aa8.99□□□□□ -0.97
COL5A1-202ENST00000371820 CLDN12P56749 244 aa8.99□□□□□ -0.97
COL5A1-202ENST00000371820 BSPH1Q075Z2 132 aa8.99□□□□□ -0.97
COL5A1-202ENST00000371820 ZNF345Q14585 488 aa8.99□□□□□ -0.97
COL5A1-202ENST00000371820 HLXQ14774 488 aaPredicted RBP8.99□□□□□ -0.97
COL5A1-202ENST00000371820 GABRA6Q16445 453 aa8.99□□□□□ -0.97
COL5A1-202ENST00000371820 THEM4Q5T1C6 240 aa8.99□□□□□ -0.97
COL5A1-202ENST00000371820 GSG1LQ6UXU4 331 aa8.99□□□□□ -0.97
COL5A1-202ENST00000371820 CIARTQ8N365 385 aaPredicted RBP8.99□□□□□ -0.97
COL5A1-202ENST00000371820 STPG2Q8N412 459 aa8.99□□□□□ -0.97
COL5A1-202ENST00000371820 OR13C3Q8NGS6 347 aa8.99□□□□□ -0.97
COL5A1-202ENST00000371820 SLC25A36Q96CQ1 311 aa8.99□□□□□ -0.97
COL5A1-202ENST00000371820 PERPQ96FX8 193 aa8.99□□□□□ -0.97
COL5A1-202ENST00000371820 Q96MF0 132 aa8.99□□□□□ -0.97
COL5A1-202ENST00000371820 TSSK2Q96PF2 358 aa8.99□□□□□ -0.97
COL5A1-202ENST00000371820 SEC22CQ9BRL7 303 aa8.99□□□□□ -0.97
COL5A1-202ENST00000371820 ABHD6Q9BV23 337 aa8.99□□□□□ -0.97
COL5A1-202ENST00000371820 CHIAQ9BZP6 476 aa8.99□□□□□ -0.97
COL5A1-202ENST00000371820 OBP2BQ9NPH6 170 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms