RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 VASH2Q86V25 355 aa11.72□□□□□ -0.53
TNFRSF21-201ENST00000296861 HOGA1Q86XE5 327 aa11.72□□□□□ -0.53
TNFRSF21-201ENST00000296861 SLC38A9Q8NBW4 561 aa11.72□□□□□ -0.53
TNFRSF21-201ENST00000296861 RTN4IP1Q8WWV3 396 aaPredicted RBP11.72□□□□□ -0.53
TNFRSF21-201ENST00000296861 TMEM230Q96A57 120 aa11.72□□□□□ -0.53
TNFRSF21-201ENST00000296861 SH3BGRL3Q9H299 93 aa11.72□□□□□ -0.53
TNFRSF21-201ENST00000296861 IFNA4P05014 189 aa11.72□□□□□ -0.53
TNFRSF21-201ENST00000296861 HPNP05981 417 aa11.72□□□□□ -0.53
TNFRSF21-201ENST00000296861 PTAFRP25105 342 aa11.72□□□□□ -0.53
TNFRSF21-201ENST00000296861 RPS18P62269 152 aaKnown RBP11.72□□□□□ -0.53
TNFRSF21-201ENST00000296861 ZNF528Q3MIS6 628 aa11.72□□□□□ -0.53
TNFRSF21-201ENST00000296861 C9orf152Q5JTZ5 239 aa11.72□□□□□ -0.53
TNFRSF21-201ENST00000296861 S100PBPQ96BU1 408 aa11.72□□□□□ -0.53
TNFRSF21-201ENST00000296861 SEC11CQ9BY50 192 aa11.72□□□□□ -0.53
TNFRSF21-201ENST00000296861 COA4Q9NYJ1 87 aa11.72□□□□□ -0.53
TNFRSF21-201ENST00000296861 DKKL1Q9UK85 242 aa11.72□□□□□ -0.53
TNFRSF21-201ENST00000296861 GPR132Q9UNW8 380 aa11.72□□□□□ -0.53
TNFRSF21-201ENST00000296861 HOXC4P09017 264 aaPredicted RBP11.71□□□□□ -0.53
TNFRSF21-201ENST00000296861 ZNF728P0DKX0 622 aa11.71□□□□□ -0.53
TNFRSF21-201ENST00000296861 EDN3P14138 238 aa11.71□□□□□ -0.53
TNFRSF21-201ENST00000296861 IGFBP3P17936 291 aaPredicted RBP11.71□□□□□ -0.53
TNFRSF21-201ENST00000296861 GNMTQ14749 295 aa11.71□□□□□ -0.53
TNFRSF21-201ENST00000296861 C1orf100Q5SVJ3 147 aa11.71□□□□□ -0.53
TNFRSF21-201ENST00000296861 DHRS7BQ6IAN0 325 aaPredicted RBP11.71□□□□□ -0.53
TNFRSF21-201ENST00000296861 FAM166AQ6J272 317 aa11.71□□□□□ -0.53
TNFRSF21-201ENST00000296861 IL1F10Q8WWZ1 152 aa11.71□□□□□ -0.53
TNFRSF21-201ENST00000296861 KCNK17Q96T54 332 aa11.71□□□□□ -0.53
TNFRSF21-201ENST00000296861 PRRX2Q99811 253 aa11.71□□□□□ -0.53
TNFRSF21-201ENST00000296861 SLC7A11Q9UPY5 501 aa11.71□□□□□ -0.53
TNFRSF21-201ENST00000296861 DOCK10Q96BY6 2186 aa11.71□□□□□ -0.53
TNFRSF21-201ENST00000296861 IGHV1OR21-1A0A087WYE8 117 aa11.71□□□□□ -0.54
TNFRSF21-201ENST00000296861 C3orf80F5H4A9 247 aa11.71□□□□□ -0.54
TNFRSF21-201ENST00000296861 TIAF1O95411 115 aa11.71□□□□□ -0.54
TNFRSF21-201ENST00000296861 LY86O95711 162 aa11.71□□□□□ -0.54
TNFRSF21-201ENST00000296861 MDKP21741 143 aaPredicted RBP11.71□□□□□ -0.54
TNFRSF21-201ENST00000296861 PTGER4P35408 488 aa11.71□□□□□ -0.54
TNFRSF21-201ENST00000296861 TAS2R46P59540 309 aa11.71□□□□□ -0.54
TNFRSF21-201ENST00000296861 DTWD2Q8NBA8 298 aa11.71□□□□□ -0.54
TNFRSF21-201ENST00000296861 MR1Q95460 341 aa11.71□□□□□ -0.54
TNFRSF21-201ENST00000296861 CCNL2Q96S94 520 aaPredicted RBP11.71□□□□□ -0.54
TNFRSF21-201ENST00000296861 C7orf77A4D0Y5 90 aa11.71□□□□□ -0.54
TNFRSF21-201ENST00000296861 ZNF727A8MUV8 499 aa11.71□□□□□ -0.54
TNFRSF21-201ENST00000296861 M0R135 149 aa11.71□□□□□ -0.54
TNFRSF21-201ENST00000296861 CNOT4O95628 575 aaKnown RBP11.71□□□□□ -0.54
TNFRSF21-201ENST00000296861 CFIP05156 583 aa11.71□□□□□ -0.54
TNFRSF21-201ENST00000296861 POU2F2P09086 479 aa11.71□□□□□ -0.54
TNFRSF21-201ENST00000296861 B4GALT1P15291 398 aa11.71□□□□□ -0.54
TNFRSF21-201ENST00000296861 APOBEC1P41238 236 aaKnown RBP11.71□□□□□ -0.54
TNFRSF21-201ENST00000296861 GUK1Q16774 197 aa11.71□□□□□ -0.54
TNFRSF21-201ENST00000296861 YRDCQ86U90 279 aaKnown RBP11.71□□□□□ -0.54
TNFRSF21-201ENST00000296861 TMEM123Q8N131 208 aa11.71□□□□□ -0.54
TNFRSF21-201ENST00000296861 ZNF799Q96GE5 643 aa11.71□□□□□ -0.54
TNFRSF21-201ENST00000296861 ZNF385AQ96PM9 386 aaKnown RBP11.71□□□□□ -0.54
TNFRSF21-201ENST00000296861 FAM212BQ9NTI7 297 aaPredicted RBP11.71□□□□□ -0.54
TNFRSF21-201ENST00000296861 FER1L5A0AVI2 2057 aa11.7□□□□□ -0.54
TNFRSF21-201ENST00000296861 LIPT2A6NK58 231 aa11.7□□□□□ -0.54
TNFRSF21-201ENST00000296861 CCL2P13500 99 aa11.7□□□□□ -0.54
TNFRSF21-201ENST00000296861 CSRP1P21291 193 aaKnown RBP11.7□□□□□ -0.54
TNFRSF21-201ENST00000296861 GLP1RP43220 463 aa11.7□□□□□ -0.54
TNFRSF21-201ENST00000296861 IGLV3-21P80748 117 aaPredicted RBP11.7□□□□□ -0.54
TNFRSF21-201ENST00000296861 PIGYQ3MUY2 71 aa11.7□□□□□ -0.54
TNFRSF21-201ENST00000296861 SOHLH1Q5JUK2 328 aa11.7□□□□□ -0.54
TNFRSF21-201ENST00000296861 TCTEX1D2Q8WW35 142 aa11.7□□□□□ -0.54
TNFRSF21-201ENST00000296861 GHRLQ9UBU3 117 aa11.7□□□□□ -0.54
TNFRSF21-201ENST00000296861 PI4KAP42356 2102 aa11.7□□□□□ -0.54
TNFRSF21-201ENST00000296861 FAM24AA6NFZ4 105 aa11.7□□□□□ -0.54
TNFRSF21-201ENST00000296861 CD37P11049 281 aa11.7□□□□□ -0.54
TNFRSF21-201ENST00000296861 FBXL14Q8N1E6 418 aa11.7□□□□□ -0.54
TNFRSF21-201ENST00000296861 ARRDC1Q8N5I2 433 aa11.7□□□□□ -0.54
TNFRSF21-201ENST00000296861 SUMF2Q8NBJ7 301 aa11.7□□□□□ -0.54
TNFRSF21-201ENST00000296861 OR14K1Q8NGZ2 314 aa11.7□□□□□ -0.54
TNFRSF21-201ENST00000296861 A0A1W2PPE3 182 aa11.69□□□□□ -0.54
TNFRSF21-201ENST00000296861 FBP1P09467 338 aa11.69□□□□□ -0.54
TNFRSF21-201ENST00000296861 FPR2P25090 351 aa11.69□□□□□ -0.54
TNFRSF21-201ENST00000296861 LTBRP36941 435 aa11.69□□□□□ -0.54
TNFRSF21-201ENST00000296861 THEM4Q5T1C6 240 aa11.69□□□□□ -0.54
TNFRSF21-201ENST00000296861 RPUSD3Q6P087 351 aaKnown RBP11.69□□□□□ -0.54
TNFRSF21-201ENST00000296861 MYPOPQ86VE0 399 aaPredicted RBP11.69□□□□□ -0.54
TNFRSF21-201ENST00000296861 OR5AS1Q8N127 324 aa11.69□□□□□ -0.54
TNFRSF21-201ENST00000296861 ZNF837Q96EG3 531 aaPredicted RBP11.69□□□□□ -0.54
TNFRSF21-201ENST00000296861 PFDN5Q99471 154 aa11.69□□□□□ -0.54
TNFRSF21-201ENST00000296861 SLC26A1Q9H2B4 701 aa11.69□□□□□ -0.54
TNFRSF21-201ENST00000296861 SLC2A8Q9NY64 477 aa11.69□□□□□ -0.54
TNFRSF21-201ENST00000296861 RCC2Q9P258 522 aaKnown RBP11.69□□□□□ -0.54
TNFRSF21-201ENST00000296861 MCTS1Q9ULC4 181 aaKnown RBP11.69□□□□□ -0.54
TNFRSF21-201ENST00000296861 E9PLN8 166 aa11.69□□□□□ -0.54
TNFRSF21-201ENST00000296861 YIF1AO95070 293 aa11.69□□□□□ -0.54
TNFRSF21-201ENST00000296861 HTR5AP47898 357 aa11.69□□□□□ -0.54
TNFRSF21-201ENST00000296861 RPS16P62249 146 aaKnown RBP11.69□□□□□ -0.54
TNFRSF21-201ENST00000296861 ACTBL2Q562R1 376 aa11.69□□□□□ -0.54
TNFRSF21-201ENST00000296861 TMEM268Q5VZI3 342 aa11.69□□□□□ -0.54
TNFRSF21-201ENST00000296861 IL34Q6ZMJ4 242 aa11.69□□□□□ -0.54
TNFRSF21-201ENST00000296861 DOK3Q7L591 496 aa11.69□□□□□ -0.54
TNFRSF21-201ENST00000296861 GPR137CQ8N3F9 429 aa11.69□□□□□ -0.54
TNFRSF21-201ENST00000296861 NOXO1Q8NFA2 376 aa11.69□□□□□ -0.54
TNFRSF21-201ENST00000296861 PECRQ9BY49 303 aa11.69□□□□□ -0.54
TNFRSF21-201ENST00000296861 ALKBH4Q9NXW9 302 aa11.69□□□□□ -0.54
TNFRSF21-201ENST00000296861 LUZP4Q9P127 313 aa11.69□□□□□ -0.54
TNFRSF21-201ENST00000296861 SSSCA1O60232 199 aa11.69□□□□□ -0.54
TNFRSF21-201ENST00000296861 GSTP1P09211 210 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms