RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 COL5A1-AS1Q5SY13 56 aa10.23□□□□□ -0.77
PTPN4-201ENST00000263708 TRAT1Q6PIZ9 186 aa10.23□□□□□ -0.77
PTPN4-201ENST00000263708 ZIC5Q96T25 663 aa10.23□□□□□ -0.77
PTPN4-201ENST00000263708 UQCC1Q9NVA1 299 aa10.23□□□□□ -0.77
PTPN4-201ENST00000263708 MFNGO00587 321 aa10.23□□□□□ -0.77
PTPN4-201ENST00000263708 TMPRSS2O15393 492 aa10.23□□□□□ -0.77
PTPN4-201ENST00000263708 RPS19P39019 145 aaKnown RBP10.23□□□□□ -0.77
PTPN4-201ENST00000263708 EMDP50402 254 aa10.23□□□□□ -0.77
PTPN4-201ENST00000263708 SMAGPQ0VAQ4 97 aa10.23□□□□□ -0.77
PTPN4-201ENST00000263708 LPAR5Q9H1C0 372 aa10.23□□□□□ -0.77
PTPN4-201ENST00000263708 PRO1933Q9H354 126 aa10.23□□□□□ -0.77
PTPN4-201ENST00000263708 RTTNQ86VV8 2226 aa10.23□□□□□ -0.77
PTPN4-201ENST00000263708 ECM29Q5VYK3 1845 aa10.23□□□□□ -0.77
PTPN4-201ENST00000263708 PLPP1O14494 284 aa10.23□□□□□ -0.77
PTPN4-201ENST00000263708 RAF1P04049 648 aa10.23□□□□□ -0.77
PTPN4-201ENST00000263708 IZUMO4Q1ZYL8 232 aa10.23□□□□□ -0.77
PTPN4-201ENST00000263708 GPR137Q96N19 417 aa10.23□□□□□ -0.77
PTPN4-201ENST00000263708 ATG101Q9BSB4 218 aa10.23□□□□□ -0.77
PTPN4-201ENST00000263708 LIPGQ9Y5X9 500 aa10.23□□□□□ -0.77
PTPN4-201ENST00000263708 FBLL1A6NHQ2 334 aaKnown RBP10.23□□□□□ -0.77
PTPN4-201ENST00000263708 ZNF815PA8K554 130 aa10.23□□□□□ -0.77
PTPN4-201ENST00000263708 POLR2IP36954 125 aaKnown RBP10.23□□□□□ -0.77
PTPN4-201ENST00000263708 PPP1R1CQ8WVI7 109 aa10.23□□□□□ -0.77
PTPN4-201ENST00000263708 TAAR9Q96RI9 348 aa10.23□□□□□ -0.77
PTPN4-201ENST00000263708 ING1Q9UK53 422 aaPredicted RBP10.23□□□□□ -0.77
PTPN4-201ENST00000263708 BTG2P78543 158 aa10.23□□□□□ -0.77
PTPN4-201ENST00000263708 KLRB1Q12918 225 aa10.23□□□□□ -0.77
PTPN4-201ENST00000263708 PATE1Q8WXA2 126 aa10.23□□□□□ -0.77
PTPN4-201ENST00000263708 TMEM38AQ9H6F2 299 aa10.23□□□□□ -0.77
PTPN4-201ENST00000263708 IGKV3D-15A0A087WSY6 115 aa10.23□□□□□ -0.77
PTPN4-201ENST00000263708 DHRS7CA6NNS2 312 aa10.23□□□□□ -0.77
PTPN4-201ENST00000263708 IGKV3-15P01624 115 aa10.23□□□□□ -0.77
PTPN4-201ENST00000263708 CD3DP04234 171 aa10.23□□□□□ -0.77
PTPN4-201ENST00000263708 ELOBQ15370 118 aa10.23□□□□□ -0.77
PTPN4-201ENST00000263708 SYNGR2O43760 224 aa10.23□□□□□ -0.77
PTPN4-201ENST00000263708 CD22P20273 847 aa10.23□□□□□ -0.77
PTPN4-201ENST00000263708 BTG1P62324 171 aa10.23□□□□□ -0.77
PTPN4-201ENST00000263708 CMPK2Q5EBM0 449 aa10.23□□□□□ -0.77
PTPN4-201ENST00000263708 OR2V1Q8NHB1 315 aa10.23□□□□□ -0.77
PTPN4-201ENST00000263708 HS3ST2Q9Y278 367 aa10.23□□□□□ -0.77
PTPN4-201ENST00000263708 UNC13CQ8NB66 2214 aa10.23□□□□□ -0.77
PTPN4-201ENST00000263708 LILRA3Q8N6C8 439 aaPredicted RBP10.23□□□□□ -0.77
PTPN4-201ENST00000263708 ARIH2OSQ8N7S6 290 aa10.23□□□□□ -0.77
PTPN4-201ENST00000263708 NOXO1Q8NFA2 376 aa10.23□□□□□ -0.77
PTPN4-201ENST00000263708 MTCL1Q9Y4B5 1905 aaKnown RBP10.23□□□□□ -0.77
PTPN4-201ENST00000263708 DNAJC25-GNG10A0A024R161 153 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 OR5B21A6NL26 309 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 TAPBPO15533 448 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 CCL7P80098 99 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 SLC38A11Q08AI6 406 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 ST8SIA1Q92185 356 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 PDLIM5Q96HC4 596 aaKnown RBP10.22□□□□□ -0.77
PTPN4-201ENST00000263708 TP53RKQ96S44 253 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 ANXA10Q9UJ72 324 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 TRBV23-1A0A0A0MS06 115 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 ZNF26P17031 533 aaPredicted RBP10.22□□□□□ -0.77
PTPN4-201ENST00000263708 PNLIPRP2P54317 469 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 PFN3P60673 137 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 NAAAQ02083 359 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 OR10D4PQ8NGN7 298 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 IGKV3D-11A0A0A0MRZ8 115 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 IGKV3-11P04433 115 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 BRS3P32247 399 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 ID1P41134 155 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 PRDM14Q9GZV8 571 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 RNF167Q9H6Y7 350 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 CST2P09228 141 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 KIR3DL2P43630 455 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 KLF3P57682 345 aaPredicted RBP10.22□□□□□ -0.77
PTPN4-201ENST00000263708 ECSCRQ19T08 205 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 CLLU1Q5K131 121 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 OR8B3Q8NGG8 313 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 KTI12Q96EK9 354 aaPredicted RBP10.22□□□□□ -0.77
PTPN4-201ENST00000263708 MRGPRX4Q96LA9 322 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 OR8B2Q96RD0 313 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 EMCNQ9ULC0 261 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 MYF5P13349 255 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 TMEM108Q6UXF1 575 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 Q8IYB0 196 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 DND1Q8IYX4 353 aaKnown RBP10.22□□□□□ -0.77
PTPN4-201ENST00000263708 NANOGP1Q8N7R0 232 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 HSPB8Q9UJY1 196 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 GNG7O60262 68 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 SP6Q3SY56 376 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 SH2D2AQ9NP31 389 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 RPS27P42677 84 aaKnown RBP10.22□□□□□ -0.77
PTPN4-201ENST00000263708 DSCR4P56555 118 aaPredicted RBP10.22□□□□□ -0.77
PTPN4-201ENST00000263708 ZNF77Q15935 545 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 CEACAM16Q2WEN9 425 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 TMEM102Q8N9M5 508 aaPredicted RBP10.22□□□□□ -0.77
PTPN4-201ENST00000263708 OR1F12Q8NHA8 337 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 MBNL1Q9NR56 388 aaKnown RBP10.22□□□□□ -0.77
PTPN4-201ENST00000263708 ANKRD31Q8N7Z5 1873 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 NGFP01138 241 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 TMEM215Q68D42 235 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 ZNF502Q8TBZ5 544 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 EXTL1Q92935 676 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 UBE2FQ969M7 185 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 FAM131CQ96AQ9 280 aa10.22□□□□□ -0.77
PTPN4-201ENST00000263708 TM4SF19Q96DZ7 209 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms