RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 C6orf201Q7Z4U5 140 aa11.83□□□□□ -0.52
NEK3-205ENST00000610828 MCEMP1Q8IX19 187 aa11.83□□□□□ -0.52
NEK3-205ENST00000610828 OR5H2Q8NGV7 314 aa11.83□□□□□ -0.52
NEK3-205ENST00000610828 TERB2Q8NHR7 220 aa11.83□□□□□ -0.52
NEK3-205ENST00000610828 APH1AQ96BI3 265 aa11.83□□□□□ -0.52
NEK3-205ENST00000610828 METTL9Q9H1A3 318 aa11.83□□□□□ -0.52
NEK3-205ENST00000610828 DEFB127Q9H1M4 99 aa11.83□□□□□ -0.52
NEK3-205ENST00000610828 BCO1Q9HAY6 547 aa11.83□□□□□ -0.52
NEK3-205ENST00000610828 PARD6AQ9NPB6 346 aa11.83□□□□□ -0.52
NEK3-205ENST00000610828 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.83□□□□□ -0.52
NEK3-205ENST00000610828 EP300Q09472 2414 aaPredicted RBP11.83□□□□□ -0.52
NEK3-205ENST00000610828 SPAARA0A1B0GVQ0 90 aa11.83□□□□□ -0.52
NEK3-205ENST00000610828 C9orf170A2RU37 121 aa11.83□□□□□ -0.52
NEK3-205ENST00000610828 HMSDA8MTL9 139 aa11.83□□□□□ -0.52
NEK3-205ENST00000610828 SERPINE3A8MV23 424 aa11.83□□□□□ -0.52
NEK3-205ENST00000610828 ZNHIT1O43257 154 aa11.83□□□□□ -0.52
NEK3-205ENST00000610828 HLA-HP01893 362 aa11.83□□□□□ -0.52
NEK3-205ENST00000610828 FTH1P19P0C7X4 201 aa11.83□□□□□ -0.52
NEK3-205ENST00000610828 EDN3P14138 238 aa11.83□□□□□ -0.52
NEK3-205ENST00000610828 SNU13P55769 128 aaKnown RBP11.83□□□□□ -0.52
NEK3-205ENST00000610828 VAX1Q5SQQ9 334 aa11.83□□□□□ -0.52
NEK3-205ENST00000610828 LHFPL2Q6ZUX7 228 aa11.83□□□□□ -0.52
NEK3-205ENST00000610828 GLRX5Q86SX6 157 aa11.83□□□□□ -0.52
NEK3-205ENST00000610828 HOGA1Q86XE5 327 aa11.83□□□□□ -0.52
NEK3-205ENST00000610828 ARRDC1Q8N5I2 433 aa11.83□□□□□ -0.52
NEK3-205ENST00000610828 ZFP62Q8NB50 900 aaPredicted RBP11.83□□□□□ -0.52
NEK3-205ENST00000610828 OR5M8Q8NGP6 311 aa11.83□□□□□ -0.52
NEK3-205ENST00000610828 CASTOR1Q8WTX7 329 aa11.83□□□□□ -0.52
NEK3-205ENST00000610828 ST8SIA4Q92187 359 aa11.83□□□□□ -0.52
NEK3-205ENST00000610828 ZNF701Q9NV72 531 aaPredicted RBP11.83□□□□□ -0.52
NEK3-205ENST00000610828 PLEKHJ1Q9NW61 149 aa11.83□□□□□ -0.52
NEK3-205ENST00000610828 B3GNT2Q9NY97 397 aa11.83□□□□□ -0.52
NEK3-205ENST00000610828 UBQLN2Q9UHD9 624 aa11.83□□□□□ -0.52
NEK3-205ENST00000610828 CFAP47Q6ZTR5 3102 aa11.83□□□□□ -0.52
NEK3-205ENST00000610828 DMXL1Q9Y485 3027 aa11.82□□□□□ -0.52
NEK3-205ENST00000610828 OR6C65A6NJZ3 312 aa11.82□□□□□ -0.52
NEK3-205ENST00000610828 ZNF724A8MTY0 619 aa11.82□□□□□ -0.52
NEK3-205ENST00000610828 RPL36A-HNRNPH2H7BZ11 118 aa11.82□□□□□ -0.52
NEK3-205ENST00000610828 CCSO14618 274 aa11.82□□□□□ -0.52
NEK3-205ENST00000610828 XRCC2O43543 280 aa11.82□□□□□ -0.52
NEK3-205ENST00000610828 CCL2P13500 99 aa11.82□□□□□ -0.52
NEK3-205ENST00000610828 OR3A3P47888 321 aa11.82□□□□□ -0.52
NEK3-205ENST00000610828 OR3A2P47893 321 aa11.82□□□□□ -0.52
NEK3-205ENST00000610828 ZNF766Q5HY98 468 aa11.82□□□□□ -0.52
NEK3-205ENST00000610828 TMEM42Q69YG0 159 aa11.82□□□□□ -0.52
NEK3-205ENST00000610828 TMPRSS7Q7RTY8 843 aa11.82□□□□□ -0.52
NEK3-205ENST00000610828 VASH2Q86V25 355 aa11.82□□□□□ -0.52
NEK3-205ENST00000610828 CSNK2A3Q8NEV1 391 aa11.82□□□□□ -0.52
NEK3-205ENST00000610828 ASB13Q8WXK3 278 aa11.82□□□□□ -0.52
NEK3-205ENST00000610828 PIGCQ92535 297 aa11.82□□□□□ -0.52
NEK3-205ENST00000610828 Q96M66 194 aa11.82□□□□□ -0.52
NEK3-205ENST00000610828 PHB2Q99623 299 aa11.82□□□□□ -0.52
NEK3-205ENST00000610828 PDCD10Q9BUL8 212 aa11.82□□□□□ -0.52
NEK3-205ENST00000610828 C1QTNF5Q9BXJ0 243 aa11.82□□□□□ -0.52
NEK3-205ENST00000610828 KCNN3Q9UGI6 736 aa11.82□□□□□ -0.52
NEK3-205ENST00000610828 OTOGLQ3ZCN5 2332 aa11.82□□□□□ -0.52
NEK3-205ENST00000610828 SDCBPO00560 298 aaPredicted RBP11.82□□□□□ -0.52
NEK3-205ENST00000610828 EFSO43281 561 aa11.82□□□□□ -0.52
NEK3-205ENST00000610828 SNAPC5O75971 98 aa11.82□□□□□ -0.52
NEK3-205ENST00000610828 SERPINA5P05154 406 aa11.82□□□□□ -0.52
NEK3-205ENST00000610828 PPP3CBP16298 524 aa11.82□□□□□ -0.52
NEK3-205ENST00000610828 NPY4RP50391 375 aa11.82□□□□□ -0.52
NEK3-205ENST00000610828 ARL6IP1Q15041 203 aa11.82□□□□□ -0.52
NEK3-205ENST00000610828 RNPS1Q15287 305 aaKnown RBP11.82□□□□□ -0.52
NEK3-205ENST00000610828 OR8B8Q15620 311 aa11.82□□□□□ -0.52
NEK3-205ENST00000610828 TAF9Q16594 264 aa11.82□□□□□ -0.52
NEK3-205ENST00000610828 PLCXD3Q63HM9 321 aa11.82□□□□□ -0.52
NEK3-205ENST00000610828 MOB3CQ70IA8 216 aa11.82□□□□□ -0.52
NEK3-205ENST00000610828 ZNF100Q8IYN0 542 aa11.82□□□□□ -0.52
NEK3-205ENST00000610828 PRDM14Q9GZV8 571 aa11.82□□□□□ -0.52
NEK3-205ENST00000610828 SLC7A11Q9UPY5 501 aa11.82□□□□□ -0.52
NEK3-205ENST00000610828 MAB21L2Q9Y586 359 aa11.82□□□□□ -0.52
NEK3-205ENST00000610828 ACTL6AO96019 429 aa11.81□□□□□ -0.52
NEK3-205ENST00000610828 IL2RAP01589 272 aa11.81□□□□□ -0.52
NEK3-205ENST00000610828 CD79AP11912 226 aa11.81□□□□□ -0.52
NEK3-205ENST00000610828 S100A11P31949 105 aa11.81□□□□□ -0.52
NEK3-205ENST00000610828 FAHD2BQ6P2I3 314 aaPredicted RBP11.81□□□□□ -0.52
NEK3-205ENST00000610828 NUFIP2Q7Z417 695 aaKnown RBP11.81□□□□□ -0.52
NEK3-205ENST00000610828 MITD1Q8WV92 249 aa11.81□□□□□ -0.52
NEK3-205ENST00000610828 PCNPQ8WW12 178 aaKnown RBP11.81□□□□□ -0.52
NEK3-205ENST00000610828 FAHD2AQ96GK7 314 aa11.81□□□□□ -0.52
NEK3-205ENST00000610828 SLX1AQ9BQ83 275 aa11.81□□□□□ -0.52
NEK3-205ENST00000610828 ARL6Q9H0F7 186 aa11.81□□□□□ -0.52
NEK3-205ENST00000610828 ACKR4Q9NPB9 350 aa11.81□□□□□ -0.52
NEK3-205ENST00000610828 FAM186AA6NE01 2351 aa11.81□□□□□ -0.52
NEK3-205ENST00000610828 URB1O60287 2271 aaKnown RBP11.81□□□□□ -0.52
NEK3-205ENST00000610828 ZNF816-ZNF321PA0A0X1KG74 233 aa11.81□□□□□ -0.52
NEK3-205ENST00000610828 C5orf49A4QMS7 147 aa11.81□□□□□ -0.52
NEK3-205ENST00000610828 ZNF503-AS2A6NEH8 195 aa11.81□□□□□ -0.52
NEK3-205ENST00000610828 FAM25EA8MYX2 175 aa11.81□□□□□ -0.52
NEK3-205ENST00000610828 RRADP55042 308 aa11.81□□□□□ -0.52
NEK3-205ENST00000610828 TAS2R46P59540 309 aa11.81□□□□□ -0.52
NEK3-205ENST00000610828 RNFT1Q5M7Z0 435 aa11.81□□□□□ -0.52
NEK3-205ENST00000610828 LPCAT3Q6P1A2 487 aa11.81□□□□□ -0.52
NEK3-205ENST00000610828 TMUB2Q71RG4 321 aa11.81□□□□□ -0.52
NEK3-205ENST00000610828 KCTD9Q7L273 389 aa11.81□□□□□ -0.52
NEK3-205ENST00000610828 TMEM17Q86X19 198 aa11.81□□□□□ -0.52
NEK3-205ENST00000610828 SEC22AQ96IW7 307 aa11.81□□□□□ -0.52
NEK3-205ENST00000610828 C12orf49Q9H741 205 aa11.81□□□□□ -0.52
NEK3-205ENST00000610828 RNF122Q9H9V4 155 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms