RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 FAM49BQ9NUQ9 324 aa3.13□□□□□ -1.91
VPS13D-207ENST00000476169 FGFR1OP2Q9NVK5 253 aa3.13□□□□□ -1.91
VPS13D-207ENST00000476169 PCYOX1Q9UHG3 505 aa3.13□□□□□ -1.91
VPS13D-207ENST00000476169 NDRG2Q9UN36 371 aaKnown RBP3.13□□□□□ -1.91
VPS13D-207ENST00000476169 USH1CQ9Y6N9 552 aa3.13□□□□□ -1.91
VPS13D-207ENST00000476169 XRN1Q8IZH2 1706 aaKnown RBP3.13□□□□□ -1.91
VPS13D-207ENST00000476169 TDRD15B5MCY1 1934 aaKnown RBP3.13□□□□□ -1.91
VPS13D-207ENST00000476169 SSH2Q76I76 1423 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 ANKARQ7Z5J8 1434 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 DENND4AQ7Z401 1863 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 ATP7BP35670 1465 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 FTCDNL1E5RQL4 147 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 J3QLI3 93 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 UBDO15205 165 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 SLC16A4O15374 487 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 CRXO43186 299 aaPredicted RBP3.12□□□□□ -1.91
VPS13D-207ENST00000476169 MPZL1O95297 269 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 CD8AP01732 235 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 APOEP02649 317 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 ZNF883P0CG24 379 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 COX5BP10606 129 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 RCC1P18754 421 aaPredicted RBP3.12□□□□□ -1.91
VPS13D-207ENST00000476169 RAB3AP20336 220 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 F8A1P23610 371 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 TALDO1P37837 337 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 RBMXP38159 391 aaKnown RBP3.12□□□□□ -1.91
VPS13D-207ENST00000476169 RAB38P57729 211 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 OR10A3P58181 314 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 UBE2NP61088 152 aaKnown RBP3.12□□□□□ -1.91
VPS13D-207ENST00000476169 SLC7A9P82251 487 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 BCL2A1Q16548 175 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 GUCA2BQ16661 112 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 GOLGA7BQ2TAP0 167 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 CHRFAM7AQ494W8 412 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 COX19Q49B96 90 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 DNAL1Q4LDG9 190 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 PDZD11Q5EBL8 140 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 SYT6Q5T7P8 510 aaPredicted RBP3.12□□□□□ -1.91
VPS13D-207ENST00000476169 PLET1Q6UQ28 207 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 FAM71E2Q8N5Q1 922 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 COX18Q8N8Q8 333 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 OR10G9Q8NGN4 311 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 OR51Q1Q8NH59 317 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 OR4S2Q8NH73 311 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 CREB3L1Q96BA8 519 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 DCPSQ96C86 337 aaKnown RBP3.12□□□□□ -1.91
VPS13D-207ENST00000476169 TMEM56Q96MV1 263 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 SULT4A1Q9BR01 284 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 SLC25A2Q9BXI2 301 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 OR11A1Q9GZK7 315 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 METTL8Q9H825 291 aaKnown RBP3.12□□□□□ -1.91
VPS13D-207ENST00000476169 RRAGDQ9NQL2 400 aaPredicted RBP3.12□□□□□ -1.91
VPS13D-207ENST00000476169 DDIT4Q9NX09 232 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 DNAJC27Q9NZQ0 273 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 ANXA10Q9UJ72 324 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 TFR2Q9UP52 801 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 SLC7A11Q9UPY5 501 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 ORC6Q9Y5N6 252 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 DLC1Q96QB1 1528 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 NFASCO94856 1347 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 PCDH11XQ9BZA7 1347 aa3.12□□□□□ -1.91
VPS13D-207ENST00000476169 RGS12O14924 1447 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 TNS3Q68CZ2 1445 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 BCL9LQ86UU0 1499 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 TULP4Q9NRJ4 1543 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 IGKV3D-15A0A087WSY6 115 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 SMIM26A0A096LP01 95 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 A0A0G2JN53 185 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 A0A1W2PRG6 482 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 H0Y980 276 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 M0QZ92 97 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 TCAPO15273 167 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 SULT1B1O43704 296 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 FAM189A1O60320 539 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 HPGDSO60760 199 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 ZNF354AO60765 605 aaPredicted RBP3.11□□□□□ -1.91
VPS13D-207ENST00000476169 CD3GP09693 182 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 ZNF30P17039 623 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 FUT3P21217 361 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 PSMB5P28074 263 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 GRPRP30550 384 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 HOXA6P31267 233 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 EVI2BP34910 448 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 CDKN2BP42772 138 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 PSMD7P51665 324 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 CDKN2DP55273 166 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 RGNQ15493 299 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 TTLL9Q3SXZ7 439 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 SLC36A2Q495M3 483 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 PIGGQ5H8A4 983 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 TMEM31Q5JXX7 168 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 METTL21CQ5VZV1 264 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 CGB2Q6NT52 195 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 MED27Q6P2C8 311 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 DRAM2Q6UX65 266 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 PRSS58Q8IYP2 241 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 LRRC34Q8IZ02 419 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 ZNF786Q8N393 782 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 POM121L12Q8N7R1 296 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 KLHL30-AS1Q8NEE0 82 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 172 ms