RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 IGKV1D-17A0A075B6S4 117 aa17.24■□□□□ 0.35
VSX1-206ENST00000444511 TCRBV3S1A0A5B6 114 aa17.24■□□□□ 0.35
VSX1-206ENST00000444511 MEIOCA2RUB1 952 aa17.24■□□□□ 0.35
VSX1-206ENST00000444511 CCDC182A6NF36 153 aa17.24■□□□□ 0.35
VSX1-206ENST00000444511 OR5B21A6NL26 309 aa17.24■□□□□ 0.35
VSX1-206ENST00000444511 SAA4P35542 130 aa17.24■□□□□ 0.35
VSX1-206ENST00000444511 RIDAP52758 137 aaKnown RBP17.24■□□□□ 0.35
VSX1-206ENST00000444511 ROM1Q03395 351 aa17.24■□□□□ 0.35
VSX1-206ENST00000444511 ZNF829Q3KNS6 432 aaPredicted RBP17.24■□□□□ 0.35
VSX1-206ENST00000444511 DMRTC1Q5HYR2 192 aa17.24■□□□□ 0.35
VSX1-206ENST00000444511 PLCXD3Q63HM9 321 aa17.24■□□□□ 0.35
VSX1-206ENST00000444511 DHRS7BQ6IAN0 325 aaPredicted RBP17.24■□□□□ 0.35
VSX1-206ENST00000444511 MOB3CQ70IA8 216 aa17.24■□□□□ 0.35
VSX1-206ENST00000444511 KRT74Q7RTS7 529 aa17.24■□□□□ 0.35
VSX1-206ENST00000444511 ZNF679Q8IYX0 411 aa17.24■□□□□ 0.35
VSX1-206ENST00000444511 ZSCAN4Q8NAM6 433 aaPredicted RBP17.24■□□□□ 0.35
VSX1-206ENST00000444511 OR5A2Q8NGI9 324 aa17.24■□□□□ 0.35
VSX1-206ENST00000444511 TNFRSF14Q92956 283 aa17.24■□□□□ 0.35
VSX1-206ENST00000444511 DUS3LQ96G46 650 aaKnown RBP17.24■□□□□ 0.35
VSX1-206ENST00000444511 OR8B4Q96RC9 309 aa17.24■□□□□ 0.35
VSX1-206ENST00000444511 TTTY10Q9BZA0 68 aa17.24■□□□□ 0.35
VSX1-206ENST00000444511 GPR84Q9NQS5 396 aa17.24■□□□□ 0.35
VSX1-206ENST00000444511 IKZF2Q9UKS7 526 aa17.24■□□□□ 0.35
VSX1-206ENST00000444511 PSG2P11465 335 aa17.23■□□□□ 0.35
VSX1-206ENST00000444511 FAHP16930 419 aa17.23■□□□□ 0.35
VSX1-206ENST00000444511 UBE2E1P51965 193 aa17.23■□□□□ 0.35
VSX1-206ENST00000444511 KRTAP10-3P60369 221 aa17.23■□□□□ 0.35
VSX1-206ENST00000444511 OCLNQ16625 522 aa17.23■□□□□ 0.35
VSX1-206ENST00000444511 MIDNQ504T8 468 aa17.23■□□□□ 0.35
VSX1-206ENST00000444511 HAGHLQ6PII5 290 aaPredicted RBP17.23■□□□□ 0.35
VSX1-206ENST00000444511 Q6ZSV7 163 aa17.23■□□□□ 0.35
VSX1-206ENST00000444511 PNKDQ8N490 385 aa17.23■□□□□ 0.35
VSX1-206ENST00000444511 ZNRF1Q8ND25 227 aa17.23■□□□□ 0.35
VSX1-206ENST00000444511 AQP3Q92482 292 aa17.23■□□□□ 0.35
VSX1-206ENST00000444511 NRBF2Q96F24 287 aa17.23■□□□□ 0.35
VSX1-206ENST00000444511 CNN2Q99439 309 aaKnown RBP17.23■□□□□ 0.35
VSX1-206ENST00000444511 PRRG3Q9BZD7 231 aa17.23■□□□□ 0.35
VSX1-206ENST00000444511 ELL3Q9HB65 397 aaPredicted RBP17.23■□□□□ 0.35
VSX1-206ENST00000444511 NUFIP1Q9UHK0 495 aaKnown RBP17.23■□□□□ 0.35
VSX1-206ENST00000444511 ENPP5Q9UJA9 477 aa17.23■□□□□ 0.35
VSX1-206ENST00000444511 GTF2A1LQ9UNN4 478 aa17.23■□□□□ 0.35
VSX1-206ENST00000444511 COPS3Q9UNS2 423 aa17.23■□□□□ 0.35
VSX1-206ENST00000444511 POMPQ9Y244 141 aa17.23■□□□□ 0.35
VSX1-206ENST00000444511 PIGLQ9Y2B2 252 aa17.23■□□□□ 0.35
VSX1-206ENST00000444511 PRR32B1ATL7 298 aa17.22■□□□□ 0.35
VSX1-206ENST00000444511 H0YAE9 185 aa17.22■□□□□ 0.35
VSX1-206ENST00000444511 CLPXO76031 633 aa17.22■□□□□ 0.35
VSX1-206ENST00000444511 CAPZA1P52907 286 aa17.22■□□□□ 0.35
VSX1-206ENST00000444511 PROK1P58294 105 aa17.22■□□□□ 0.35
VSX1-206ENST00000444511 ACSM1Q08AH1 577 aa17.22■□□□□ 0.35
VSX1-206ENST00000444511 PTGES3Q15185 160 aaKnown RBP17.22■□□□□ 0.35
VSX1-206ENST00000444511 ZBTB37Q5TC79 503 aa17.22■□□□□ 0.35
VSX1-206ENST00000444511 FAHD1Q6P587 224 aa17.22■□□□□ 0.35
VSX1-206ENST00000444511 FAM185AQ8N0U4 392 aa17.22■□□□□ 0.35
VSX1-206ENST00000444511 OR5R1Q8NH85 324 aa17.22■□□□□ 0.35
VSX1-206ENST00000444511 ZNF222Q9UK12 451 aa17.22■□□□□ 0.35
VSX1-206ENST00000444511 MAB21L2Q9Y586 359 aa17.22■□□□□ 0.35
VSX1-206ENST00000444511 TRBV23-1A0A0A0MS06 115 aa17.21■□□□□ 0.35
VSX1-206ENST00000444511 PRKYO43930 277 aa17.21■□□□□ 0.35
VSX1-206ENST00000444511 MTRF1O75570 445 aaKnown RBP17.21■□□□□ 0.35
VSX1-206ENST00000444511 DHRS3O75911 302 aa17.21■□□□□ 0.35
VSX1-206ENST00000444511 IGLV3-1P01715 115 aa17.21■□□□□ 0.35
VSX1-206ENST00000444511 DAPP51397 102 aa17.21■□□□□ 0.35
VSX1-206ENST00000444511 MFGE8Q08431 387 aaPredicted RBP17.21■□□□□ 0.35
VSX1-206ENST00000444511 PDLIM3Q53GG5 364 aaPredicted RBP17.21■□□□□ 0.35
VSX1-206ENST00000444511 ZNF684Q5T5D7 378 aa17.21■□□□□ 0.35
VSX1-206ENST00000444511 OR5D13Q8NGL4 314 aa17.21■□□□□ 0.35
VSX1-206ENST00000444511 PPP1R14AQ96A00 147 aa17.21■□□□□ 0.35
VSX1-206ENST00000444511 SDSLQ96GA7 329 aa17.21■□□□□ 0.35
VSX1-206ENST00000444511 MMP27Q9H306 513 aa17.21■□□□□ 0.35
VSX1-206ENST00000444511 C16orf95Q9H693 158 aa17.21■□□□□ 0.35
VSX1-206ENST00000444511 TCF7L1Q9HCS4 588 aa17.21■□□□□ 0.35
VSX1-206ENST00000444511 RASL12Q9NYN1 266 aa17.21■□□□□ 0.35
VSX1-206ENST00000444511 H2AFY2Q9P0M6 372 aaPredicted RBP17.21■□□□□ 0.35
VSX1-206ENST00000444511 LOC110117498-PIK3R3F6TDL0 507 aa17.2■□□□□ 0.34
VSX1-206ENST00000444511 DNAJC8O75937 253 aaPredicted RBP17.2■□□□□ 0.34
VSX1-206ENST00000444511 NRASP01111 189 aa17.2■□□□□ 0.34
VSX1-206ENST00000444511 TGFBR2P37173 567 aa17.2■□□□□ 0.34
VSX1-206ENST00000444511 ESRRGP62508 458 aa17.2■□□□□ 0.34
VSX1-206ENST00000444511 SMIM21Q3B7S5 101 aa17.2■□□□□ 0.34
VSX1-206ENST00000444511 ZNF322Q6U7Q0 402 aaPredicted RBP17.2■□□□□ 0.34
VSX1-206ENST00000444511 MEPCEQ7L2J0 689 aaKnown RBP17.2■□□□□ 0.34
VSX1-206ENST00000444511 UBE2FQ969M7 185 aa17.2■□□□□ 0.34
VSX1-206ENST00000444511 SLC7A6OSQ96CW6 309 aaPredicted RBP17.2■□□□□ 0.34
VSX1-206ENST00000444511 RBM4BQ9BQ04 359 aaKnown RBP17.2■□□□□ 0.34
VSX1-206ENST00000444511 MOB1AQ9H8S9 216 aa17.2■□□□□ 0.34
VSX1-206ENST00000444511 SF3B6Q9Y3B4 125 aaKnown RBP17.2■□□□□ 0.34
VSX1-206ENST00000444511 ANKRD61A6NGH8 418 aa17.19■□□□□ 0.34
VSX1-206ENST00000444511 TTRP02766 147 aa17.19■□□□□ 0.34
VSX1-206ENST00000444511 CXCR4P61073 352 aa17.19■□□□□ 0.34
VSX1-206ENST00000444511 ACTR3P61158 418 aa17.19■□□□□ 0.34
VSX1-206ENST00000444511 BCL2L15Q5TBC7 163 aa17.19■□□□□ 0.34
VSX1-206ENST00000444511 ASPHD2Q6ICH7 369 aa17.19■□□□□ 0.34
VSX1-206ENST00000444511 ACP7Q6ZNF0 438 aa17.19■□□□□ 0.34
VSX1-206ENST00000444511 BCDIN3DQ7Z5W3 292 aaKnown RBP17.19■□□□□ 0.34
VSX1-206ENST00000444511 ZNF573Q86YE8 665 aa17.19■□□□□ 0.34
VSX1-206ENST00000444511 POC1AQ8NBT0 407 aa17.19■□□□□ 0.34
VSX1-206ENST00000444511 OR5K1Q8NHB7 308 aa17.19■□□□□ 0.34
VSX1-206ENST00000444511 ZNF488Q96MN9 340 aa17.19■□□□□ 0.34
VSX1-206ENST00000444511 APOL4Q9BPW4 351 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms