RNA–Protein interactions for RNA: ENST00000410299.1

RNU2-54P-201, Transcript of RNA, U2 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU2-54P, Length 190 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-54P-201ENST00000410299 STEAP4Q687X5 459 aa0.3□□□□□ -2.36
RNU2-54P-201ENST00000410299 OR2T5Q6IEZ7 315 aa0.3□□□□□ -2.36
RNU2-54P-201ENST00000410299 SPESP1Q6UW49 350 aa0.3□□□□□ -2.36
RNU2-54P-201ENST00000410299 CYHR1Q6ZMK1 362 aa0.3□□□□□ -2.36
RNU2-54P-201ENST00000410299 RAB43Q86YS6 212 aa0.3□□□□□ -2.36
RNU2-54P-201ENST00000410299 ZDHHC22Q8N966 263 aa0.3□□□□□ -2.36
RNU2-54P-201ENST00000410299 OR8K1Q8NGG5 319 aa0.3□□□□□ -2.36
RNU2-54P-201ENST00000410299 OR2T29Q8NH02 315 aa0.3□□□□□ -2.36
RNU2-54P-201ENST00000410299 LMX1AQ8TE12 382 aa0.3□□□□□ -2.36
RNU2-54P-201ENST00000410299 BLNKQ8WV28 456 aa0.3□□□□□ -2.36
RNU2-54P-201ENST00000410299 RXFP2Q8WXD0 754 aa0.3□□□□□ -2.36
RNU2-54P-201ENST00000410299 RSPH1Q8WYR4 309 aa0.3□□□□□ -2.36
RNU2-54P-201ENST00000410299 ELMO1Q92556 727 aa0.3□□□□□ -2.36
RNU2-54P-201ENST00000410299 FBXO32Q969P5 355 aa0.3□□□□□ -2.36
RNU2-54P-201ENST00000410299 MRPL48Q96GC5 212 aaKnown RBP0.3□□□□□ -2.36
RNU2-54P-201ENST00000410299 PPP1R36Q96LQ0 422 aa0.3□□□□□ -2.36
RNU2-54P-201ENST00000410299 FAM19A4Q96LR4 140 aa0.3□□□□□ -2.36
RNU2-54P-201ENST00000410299 CALN1Q9BXU9 219 aa0.3□□□□□ -2.36
RNU2-54P-201ENST00000410299 ZYG11BQ9C0D3 744 aa0.3□□□□□ -2.36
RNU2-54P-201ENST00000410299 ANKRA2Q9H9E1 313 aa0.3□□□□□ -2.36
RNU2-54P-201ENST00000410299 FANCEQ9HB96 536 aa0.3□□□□□ -2.36
RNU2-54P-201ENST00000410299 ABCB9Q9NP78 766 aa0.3□□□□□ -2.36
RNU2-54P-201ENST00000410299 TMEM100Q9NV29 134 aa0.3□□□□□ -2.36
RNU2-54P-201ENST00000410299 PTTG3PQ9NZH4 202 aa0.3□□□□□ -2.36
RNU2-54P-201ENST00000410299 PITPNC1Q9UKF7 332 aa0.3□□□□□ -2.36
RNU2-54P-201ENST00000410299 NDRG2Q9UN36 371 aaKnown RBP0.3□□□□□ -2.36
RNU2-54P-201ENST00000410299 OR51B4Q9Y5P0 310 aa0.3□□□□□ -2.36
RNU2-54P-201ENST00000410299 CACNA1SQ13698 1873 aa0.3□□□□□ -2.36
RNU2-54P-201ENST00000410299 TMEM131Q92545 1883 aa0.3□□□□□ -2.36
RNU2-54P-201ENST00000410299 USP24Q9UPU5 2620 aa0.3□□□□□ -2.36
RNU2-54P-201ENST00000410299 MICAL3Q7RTP6 2002 aa0.3□□□□□ -2.36
RNU2-54P-201ENST00000410299 RTTNQ86VV8 2226 aa0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 A8MWP4 228 aa0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 HUS1O60921 280 aa0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 CTAG2O75638 210 aa0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 CRTAPO75718 401 aaPredicted RBP0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 RAB36O95755 333 aa0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 CDK1P06493 297 aa0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 CLTAP09496 248 aa0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 EIF2S2P20042 333 aaKnown RBP0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 RAB5AP20339 215 aa0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 TAGLN2P37802 199 aaKnown RBP0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 RFC3P40938 356 aa0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 ERFP50548 548 aa0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 NUDT2P50583 147 aa0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 PSG4Q00888 419 aa0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 ZNF33AQ06730 810 aa0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 HES1Q14469 280 aa0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 CCDC183Q5T5S1 534 aa0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 CASC1Q6TDU7 716 aa0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 Q6ZRU5 148 aa0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 RGS9BPQ6ZS82 235 aa0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 AMN1Q8IY45 258 aa0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 VKORC1L1Q8N0U8 176 aa0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 ZCCHC24Q8N2G6 241 aaKnown RBP0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 C3orf22Q8N5N4 141 aa0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 WDR31Q8NA23 367 aa0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 TTC29Q8NA56 475 aaPredicted RBP0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 BPIFB6Q8NFQ5 453 aa0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 OR8S1Q8NH09 359 aa0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 OR2V1Q8NHB1 315 aa0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 RAB1CQ92928 201 aa0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 APOBEC3DQ96AK3 386 aaPredicted RBP0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 RNF170Q96K19 258 aa0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 GPR21Q99679 349 aa0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 NAPGQ99747 312 aaPredicted RBP0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 CRACR2AQ9BSW2 395 aa0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 SLC7A5P2Q9GIP4 190 aa0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 KIR3DX1Q9H7L2 352 aa0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 TREX1Q9NSU2 369 aa0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 CCL26Q9Y258 94 aa0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 RCL1Q9Y2P8 373 aaKnown RBP0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 PPIL1Q9Y3C6 166 aa0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 ENPP4Q9Y6X5 453 aa0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 ARHGAP32A7KAX9 2087 aa0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP0.29□□□□□ -2.36
RNU2-54P-201ENST00000410299 IGKV1D-37A0A075B6S9 117 aa0.28□□□□□ -2.36
RNU2-54P-201ENST00000410299 TRBV11-1A0A0K0K1C0 115 aa0.28□□□□□ -2.36
RNU2-54P-201ENST00000410299 HEATR9A2RTY3 570 aa0.28□□□□□ -2.36
RNU2-54P-201ENST00000410299 LINC01619G3V211 115 aa0.28□□□□□ -2.36
RNU2-54P-201ENST00000410299 H3BMM0 161 aa0.28□□□□□ -2.36
RNU2-54P-201ENST00000410299 ISLRO14498 428 aa0.28□□□□□ -2.36
RNU2-54P-201ENST00000410299 LSM1O15116 133 aaKnown RBP0.28□□□□□ -2.36
RNU2-54P-201ENST00000410299 ERI3O43414 337 aaKnown RBP0.28□□□□□ -2.36
RNU2-54P-201ENST00000410299 CCNB2O95067 398 aa0.28□□□□□ -2.36
RNU2-54P-201ENST00000410299 PTHP01270 115 aa0.28□□□□□ -2.36
RNU2-54P-201ENST00000410299 PTHLHP12272 177 aa0.28□□□□□ -2.36
RNU2-54P-201ENST00000410299 GZMAP12544 262 aa0.28□□□□□ -2.36
RNU2-54P-201ENST00000410299 CRABP2P29373 138 aa0.28□□□□□ -2.36
RNU2-54P-201ENST00000410299 MRPL19P49406 292 aaKnown RBP0.28□□□□□ -2.36
RNU2-54P-201ENST00000410299 AP1S2P56377 157 aa0.28□□□□□ -2.36
RNU2-54P-201ENST00000410299 UBE2MP61081 183 aaKnown RBP0.28□□□□□ -2.36
RNU2-54P-201ENST00000410299 TAF7Q15545 349 aaPredicted RBP0.28□□□□□ -2.36
RNU2-54P-201ENST00000410299 CST6Q15828 149 aa0.28□□□□□ -2.36
RNU2-54P-201ENST00000410299 TRMT5Q32P41 509 aaKnown RBP0.28□□□□□ -2.36
RNU2-54P-201ENST00000410299 WDR82Q6UXN9 313 aa0.28□□□□□ -2.36
RNU2-54P-201ENST00000410299 FAM228AQ86W67 206 aa0.28□□□□□ -2.36
RNU2-54P-201ENST00000410299 SLC22A9Q8IVM8 553 aa0.28□□□□□ -2.36
RNU2-54P-201ENST00000410299 SLC30A8Q8IWU4 369 aa0.28□□□□□ -2.36
RNU2-54P-201ENST00000410299 HS3ST5Q8IZT8 346 aa0.28□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms