RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 C2orf72A6NCS6 295 aa17.64■□□□□ 0.41
SHANK1-203ENST00000391813 C4orf47A7E2U8 309 aa17.64■□□□□ 0.41
SHANK1-203ENST00000391813 WDR1O75083 606 aa17.64■□□□□ 0.41
SHANK1-203ENST00000391813 HLA-DQB1P01920 261 aa17.64■□□□□ 0.41
SHANK1-203ENST00000391813 PTGFRP43088 359 aa17.64■□□□□ 0.41
SHANK1-203ENST00000391813 GALR1P47211 349 aa17.64■□□□□ 0.41
SHANK1-203ENST00000391813 PLA2G2FQ9BZM2 168 aa17.64■□□□□ 0.41
SHANK1-203ENST00000391813 NOSIPQ9Y314 301 aaKnown RBP17.64■□□□□ 0.41
SHANK1-203ENST00000391813 ADAMTSL1Q8N6G6 1762 aa17.64■□□□□ 0.41
SHANK1-203ENST00000391813 LILRA5A6NI73 299 aa17.64■□□□□ 0.41
SHANK1-203ENST00000391813 CXCL2P19875 107 aa17.64■□□□□ 0.41
SHANK1-203ENST00000391813 TNFSF4P23510 183 aa17.64■□□□□ 0.41
SHANK1-203ENST00000391813 PRAMEF20Q5VT98 475 aa17.64■□□□□ 0.41
SHANK1-203ENST00000391813 SMDT1Q9H4I9 107 aa17.64■□□□□ 0.41
SHANK1-203ENST00000391813 SIRT3Q9NTG7 399 aaPredicted RBP17.64■□□□□ 0.41
SHANK1-203ENST00000391813 RP1L1Q8IWN7 2480 aaPredicted RBP17.64■□□□□ 0.41
SHANK1-203ENST00000391813 M0R296 226 aa17.63■□□□□ 0.41
SHANK1-203ENST00000391813 PNLIPRP2P54317 469 aa17.63■□□□□ 0.41
SHANK1-203ENST00000391813 UBE2G1P62253 170 aa17.63■□□□□ 0.41
SHANK1-203ENST00000391813 ZFC3H1O60293 1989 aaKnown RBP17.63■□□□□ 0.41
SHANK1-203ENST00000391813 FER1L6Q2WGJ9 1857 aa17.63■□□□□ 0.41
SHANK1-203ENST00000391813 MPLP40238 635 aa17.63■□□□□ 0.41
SHANK1-203ENST00000391813 PRAMEF5Q5TYX0 476 aa17.63■□□□□ 0.41
SHANK1-203ENST00000391813 PRAMEF6Q5VXH4 476 aa17.63■□□□□ 0.41
SHANK1-203ENST00000391813 RAB40CQ96S21 281 aa17.63■□□□□ 0.41
SHANK1-203ENST00000391813 OR51M1Q9H341 326 aa17.63■□□□□ 0.41
SHANK1-203ENST00000391813 MTCH1Q9NZJ7 389 aa17.63■□□□□ 0.41
SHANK1-203ENST00000391813 SLC17A4Q9Y2C5 497 aa17.63■□□□□ 0.41
SHANK1-203ENST00000391813 CDRT15L2A8MXV6 281 aa17.63■□□□□ 0.41
SHANK1-203ENST00000391813 CAPZBP47756 277 aa17.63■□□□□ 0.41
SHANK1-203ENST00000391813 CARD18P57730 90 aa17.63■□□□□ 0.41
SHANK1-203ENST00000391813 ZNF383Q8NA42 475 aa17.63■□□□□ 0.41
SHANK1-203ENST00000391813 RPH3ALQ9UNE2 315 aa17.63■□□□□ 0.41
SHANK1-203ENST00000391813 WDR90Q96KV7 1748 aa17.63■□□□□ 0.41
SHANK1-203ENST00000391813 ZG16BQ96DA0 208 aa17.63■□□□□ 0.41
SHANK1-203ENST00000391813 SLC52A3Q9NQ40 469 aa17.63■□□□□ 0.41
SHANK1-203ENST00000391813 KNTC1P50748 2209 aa17.62■□□□□ 0.41
SHANK1-203ENST00000391813 CLEC18AA5D8T8 446 aa17.62■□□□□ 0.41
SHANK1-203ENST00000391813 PPM1DO15297 605 aa17.62■□□□□ 0.41
SHANK1-203ENST00000391813 ALOX12BO75342 701 aa17.62■□□□□ 0.41
SHANK1-203ENST00000391813 GABRA2P47869 451 aa17.62■□□□□ 0.41
SHANK1-203ENST00000391813 RGS7BPQ6MZT1 257 aaPredicted RBP17.62■□□□□ 0.41
SHANK1-203ENST00000391813 CLEC18CQ8NCF0 446 aa17.62■□□□□ 0.41
SHANK1-203ENST00000391813 CMTM2Q8TAZ6 248 aa17.62■□□□□ 0.41
SHANK1-203ENST00000391813 SPSB1Q96BD6 273 aa17.62■□□□□ 0.41
SHANK1-203ENST00000391813 CEACAM5P06731 702 aa17.62■□□□□ 0.41
SHANK1-203ENST00000391813 RAB35Q15286 201 aa17.62■□□□□ 0.41
SHANK1-203ENST00000391813 MED29Q9NX70 200 aa17.62■□□□□ 0.41
SHANK1-203ENST00000391813 PITPNC1Q9UKF7 332 aa17.62■□□□□ 0.41
SHANK1-203ENST00000391813 ST3GAL6Q9Y274 331 aa17.62■□□□□ 0.41
SHANK1-203ENST00000391813 IAPPP10997 89 aa17.62■□□□□ 0.41
SHANK1-203ENST00000391813 SLC37A1P57057 533 aa17.62■□□□□ 0.41
SHANK1-203ENST00000391813 ZNF121P58317 390 aaPredicted RBP17.62■□□□□ 0.41
SHANK1-203ENST00000391813 TRMT61AQ96FX7 289 aaKnown RBP17.62■□□□□ 0.41
SHANK1-203ENST00000391813 NRIP2Q9BQI9 281 aa17.62■□□□□ 0.41
SHANK1-203ENST00000391813 Q9N2K0 584 aa17.62■□□□□ 0.41
SHANK1-203ENST00000391813 H0Y8G0 127 aa17.62■□□□□ 0.41
SHANK1-203ENST00000391813 GPANK1O95872 356 aa17.62■□□□□ 0.41
SHANK1-203ENST00000391813 GLRA1P23415 457 aa17.62■□□□□ 0.41
SHANK1-203ENST00000391813 EIF3IQ13347 325 aaKnown RBP17.62■□□□□ 0.41
SHANK1-203ENST00000391813 JMJD6Q6NYC1 403 aaPredicted RBP17.62■□□□□ 0.41
SHANK1-203ENST00000391813 OSR2Q8N2R0 312 aa17.62■□□□□ 0.41
SHANK1-203ENST00000391813 GABRG3Q99928 467 aa17.62■□□□□ 0.41
SHANK1-203ENST00000391813 TIMM10BQ9Y5J6 103 aa17.62■□□□□ 0.41
SHANK1-203ENST00000391813 ARL2-SNX15V9GYD0 113 aa17.62■□□□□ 0.41
SHANK1-203ENST00000391813 ZNF732B4DXR9 585 aa17.61■□□□□ 0.41
SHANK1-203ENST00000391813 K7EQM0 130 aa17.61■□□□□ 0.41
SHANK1-203ENST00000391813 ZNF793Q6ZN11 406 aa17.61■□□□□ 0.41
SHANK1-203ENST00000391813 OXGR1Q96P68 337 aa17.61■□□□□ 0.41
SHANK1-203ENST00000391813 TAAR9Q96RI9 348 aa17.61■□□□□ 0.41
SHANK1-203ENST00000391813 YTHDF2Q9Y5A9 579 aaKnown RBP17.61■□□□□ 0.41
SHANK1-203ENST00000391813 H0YIG0 161 aa17.61■□□□□ 0.41
SHANK1-203ENST00000391813 MASP2O00187 686 aa17.61■□□□□ 0.41
SHANK1-203ENST00000391813 PTTG1IPP53801 180 aa17.61■□□□□ 0.41
SHANK1-203ENST00000391813 HLA-BQ31612 363 aa17.61■□□□□ 0.41
SHANK1-203ENST00000391813 C19orf35Q6ZS72 473 aa17.61■□□□□ 0.41
SHANK1-203ENST00000391813 OR5C1Q8NGR4 320 aa17.61■□□□□ 0.41
SHANK1-203ENST00000391813 TUBGCP6Q96RT7 1819 aa17.61■□□□□ 0.41
SHANK1-203ENST00000391813 FAM221AA4D161 298 aa17.61■□□□□ 0.41
SHANK1-203ENST00000391813 NSUN5P2Q63ZY6 315 aa17.61■□□□□ 0.41
SHANK1-203ENST00000391813 PUSL1Q8N0Z8 303 aaKnown RBP17.61■□□□□ 0.41
SHANK1-203ENST00000391813 RAB33BQ9H082 229 aa17.61■□□□□ 0.41
SHANK1-203ENST00000391813 CA10Q9NS85 328 aa17.61■□□□□ 0.41
SHANK1-203ENST00000391813 POLDIP2Q9Y2S7 368 aa17.61■□□□□ 0.41
SHANK1-203ENST00000391813 PCDHGA9Q9Y5G4 932 aaKnown RBP17.61■□□□□ 0.41
SHANK1-203ENST00000391813 ICOSLGO75144 302 aa17.6■□□□□ 0.41
SHANK1-203ENST00000391813 YBX1P67809 324 aaKnown RBP17.6■□□□□ 0.41
SHANK1-203ENST00000391813 UBE3DQ7Z6J8 389 aa17.6■□□□□ 0.41
SHANK1-203ENST00000391813 ZADH2Q8N4Q0 377 aa17.6■□□□□ 0.41
SHANK1-203ENST00000391813 ARHGAP5-AS1Q96IT6 56 aa17.6■□□□□ 0.41
SHANK1-203ENST00000391813 GDF15Q99988 308 aa17.6■□□□□ 0.41
SHANK1-203ENST00000391813 OR2J2O76002 312 aa17.6■□□□□ 0.41
SHANK1-203ENST00000391813 OR10J4P0C629 311 aa17.6■□□□□ 0.41
SHANK1-203ENST00000391813 TBXA2RP21731 343 aa17.6■□□□□ 0.41
SHANK1-203ENST00000391813 SP6Q3SY56 376 aa17.6■□□□□ 0.41
SHANK1-203ENST00000391813 NAA60Q9H7X0 242 aa17.6■□□□□ 0.41
SHANK1-203ENST00000391813 BET1LQ9NYM9 111 aa17.6■□□□□ 0.41
SHANK1-203ENST00000391813 SSUH2Q9Y2M2 353 aa17.6■□□□□ 0.41
SHANK1-203ENST00000391813 MRPS2Q9Y399 296 aaKnown RBP17.6■□□□□ 0.41
SHANK1-203ENST00000391813 RGPD3A6NKT7 1758 aaPredicted RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms