RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 C1orf198Q9H425 327 aa9.03□□□□□ -0.96
COL5A1-202ENST00000371820 ELOVL3Q9HB03 270 aa9.03□□□□□ -0.96
COL5A1-202ENST00000371820 COMMD9Q9P000 198 aa9.03□□□□□ -0.96
COL5A1-202ENST00000371820 KCNG2Q9UJ96 466 aa9.03□□□□□ -0.96
COL5A1-202ENST00000371820 FN1P02751 2386 aaKnown RBP9.03□□□□□ -0.96
COL5A1-202ENST00000371820 TRAV18A0A075B6X5 111 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 LIPT2A6NK58 231 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 AQP7P3A6NL99 342 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 SMLR1H3BR10 107 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 I3L521 148 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 HS3ST1O14792 307 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 LYZL6O75951 148 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 MAS1P04201 325 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 F13BP05160 661 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 HEXAP06865 529 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 CHRM2P08172 466 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 RPA2P15927 270 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 IGHV1-2P23083 117 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 HTR2CP28335 458 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 RAD52P43351 418 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 SOX2P48431 317 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 CYCSP99999 105 aaKnown RBP9.02□□□□□ -0.97
COL5A1-202ENST00000371820 TAGLNQ01995 201 aaKnown RBP9.02□□□□□ -0.97
COL5A1-202ENST00000371820 TGFBR3Q03167 851 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 SRSF4Q08170 494 aaKnown RBP9.02□□□□□ -0.97
COL5A1-202ENST00000371820 ARL6IP1Q15041 203 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 OR7A5Q15622 319 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 TSC22D1Q15714 1073 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 AANATQ16613 207 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 MEP1BQ16820 701 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 RNASE12Q5GAN4 147 aaKnown RBP9.02□□□□□ -0.97
COL5A1-202ENST00000371820 NHLRC3Q5JS37 347 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 Q5PR19 223 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 C1orf100Q5SVJ3 147 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 NCMAPQ5T1S8 102 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 C1orf140Q5VVS0 124 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 TMEM225Q6GV28 225 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 FAM166AQ6J272 317 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 ALKBH2Q6NS38 261 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 ADAM5Q6NVV9 412 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 KLHL24Q6TFL4 600 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 PRSS57Q6UWY2 283 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 CLEC9AQ6UXN8 241 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 C22orf34Q6ZV56 151 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 CATSPERDQ86XM0 798 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 SERPINA12Q8IW75 414 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 IZUMO1Q8IYV9 350 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 EIF4E3Q8N5X7 224 aaKnown RBP9.02□□□□□ -0.97
COL5A1-202ENST00000371820 ZNF611Q8N823 705 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 C1orf162Q8NEQ5 155 aaPredicted RBP9.02□□□□□ -0.97
COL5A1-202ENST00000371820 BEST4Q8NFU0 473 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 ZNF519Q8TB69 540 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 TNFAIP8L1Q8WVP5 186 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 ZNRF4Q8WWF5 429 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 RGP1Q92546 391 aaPredicted RBP9.02□□□□□ -0.97
COL5A1-202ENST00000371820 RBPMSQ93062 196 aaKnown RBP9.02□□□□□ -0.97
COL5A1-202ENST00000371820 TMEM45BQ96B21 275 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 ZNF775Q96BV0 537 aaPredicted RBP9.02□□□□□ -0.97
COL5A1-202ENST00000371820 KTI12Q96EK9 354 aaPredicted RBP9.02□□□□□ -0.97
COL5A1-202ENST00000371820 DNAJA3Q96EY1 480 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 MOGAT1Q96PD6 335 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 RBP7Q96R05 134 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 PRRT1Q99946 306 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 UQCC2Q9BRT2 126 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 TMEM204Q9BSN7 226 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 ATG5Q9H1Y0 275 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 SLC25A32Q9H2D1 315 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 AUNIPQ9H7T9 357 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 RDH8Q9NYR8 311 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 SPEF1Q9Y4P9 236 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 FLVCR1Q9Y5Y0 555 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 R4GMQ9 66 aa9.02□□□□□ -0.97
COL5A1-202ENST00000371820 A0A0B4J203 849 aa9.01□□□□□ -0.97
COL5A1-202ENST00000371820 SLC22A23A1A5C7 686 aa9.01□□□□□ -0.97
COL5A1-202ENST00000371820 OR5H1A6NKK0 313 aa9.01□□□□□ -0.97
COL5A1-202ENST00000371820 RFPL4AA6NLU0 287 aa9.01□□□□□ -0.97
COL5A1-202ENST00000371820 FAM171A2A8MVW0 826 aa9.01□□□□□ -0.97
COL5A1-202ENST00000371820 RFPL4AL1F8VTS6 287 aa9.01□□□□□ -0.97
COL5A1-202ENST00000371820 H3BUI4 141 aa9.01□□□□□ -0.97
COL5A1-202ENST00000371820 PLPP3O14495 311 aa9.01□□□□□ -0.97
COL5A1-202ENST00000371820 MAGEB4O15481 346 aaPredicted RBP9.01□□□□□ -0.97
COL5A1-202ENST00000371820 SLC16A7O60669 478 aa9.01□□□□□ -0.97
COL5A1-202ENST00000371820 NPIPB7O75200 414 aa9.01□□□□□ -0.97
COL5A1-202ENST00000371820 RAD51DO75771 328 aa9.01□□□□□ -0.97
COL5A1-202ENST00000371820 RAB3DO95716 219 aa9.01□□□□□ -0.97
COL5A1-202ENST00000371820 WNT11O96014 354 aa9.01□□□□□ -0.97
COL5A1-202ENST00000371820 CYB5AP00167 134 aa9.01□□□□□ -0.97
COL5A1-202ENST00000371820 RLN1P04808 185 aa9.01□□□□□ -0.97
COL5A1-202ENST00000371820 ALDOBP05062 364 aa9.01□□□□□ -0.97
COL5A1-202ENST00000371820 HLA-GP17693 338 aa9.01□□□□□ -0.97
COL5A1-202ENST00000371820 IGFBP3P17936 291 aaPredicted RBP9.01□□□□□ -0.97
COL5A1-202ENST00000371820 ADRA2CP18825 462 aa9.01□□□□□ -0.97
COL5A1-202ENST00000371820 HSD11B1P28845 292 aa9.01□□□□□ -0.97
COL5A1-202ENST00000371820 POU3F4P49335 361 aa9.01□□□□□ -0.97
COL5A1-202ENST00000371820 ZP1P60852 638 aa9.01□□□□□ -0.97
COL5A1-202ENST00000371820 UBE2MP61081 183 aaKnown RBP9.01□□□□□ -0.97
COL5A1-202ENST00000371820 EIF2B1Q14232 305 aaKnown RBP9.01□□□□□ -0.97
COL5A1-202ENST00000371820 TMUB2Q71RG4 321 aa9.01□□□□□ -0.97
COL5A1-202ENST00000371820 H1FNTQ75WM6 255 aaPredicted RBP9.01□□□□□ -0.97
COL5A1-202ENST00000371820 SYT9Q86SS6 491 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms