RNA–Protein interactions for RNA: ENST00000359947.8

PTPRF-201, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best) BASIC

Gene PTPRF, Length 7,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-201ENST00000359947 SLC25A35Q3KQZ1 300 aa13.9□□□□□ -0.18
PTPRF-201ENST00000359947 ZNF788Q6ZQV5 615 aa13.9□□□□□ -0.18
PTPRF-201ENST00000359947 OR6C68A6NDL8 312 aa13.9□□□□□ -0.19
PTPRF-201ENST00000359947 GFRA3O60609 400 aa13.9□□□□□ -0.19
PTPRF-201ENST00000359947 OR2Y1Q8NGV0 311 aa13.9□□□□□ -0.19
PTPRF-201ENST00000359947 FAAP24Q9BTP7 215 aa13.9□□□□□ -0.19
PTPRF-201ENST00000359947 IL36GQ9NZH8 169 aa13.9□□□□□ -0.19
PTPRF-201ENST00000359947 B3GALNT1O75752 331 aa13.89□□□□□ -0.19
PTPRF-201ENST00000359947 TIGD3Q6B0B8 471 aa13.89□□□□□ -0.19
PTPRF-201ENST00000359947 BTNL8Q6UX41 500 aa13.89□□□□□ -0.19
PTPRF-201ENST00000359947 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.89□□□□□ -0.19
PTPRF-201ENST00000359947 MAMSTRQ6ZN01 415 aa13.89□□□□□ -0.19
PTPRF-201ENST00000359947 OR8B3Q8NGG8 313 aa13.89□□□□□ -0.19
PTPRF-201ENST00000359947 ZG16BQ96DA0 208 aa13.89□□□□□ -0.19
PTPRF-201ENST00000359947 OR8B2Q96RD0 313 aa13.89□□□□□ -0.19
PTPRF-201ENST00000359947 DOK5Q9P104 306 aa13.89□□□□□ -0.19
PTPRF-201ENST00000359947 XKRY2A2RUG3 117 aa13.89□□□□□ -0.19
PTPRF-201ENST00000359947 AVPR2P30518 371 aa13.89□□□□□ -0.19
PTPRF-201ENST00000359947 SRD5A2P31213 254 aa13.89□□□□□ -0.19
PTPRF-201ENST00000359947 HMGN3Q15651 99 aa13.89□□□□□ -0.19
PTPRF-201ENST00000359947 SFTPA2Q8IWL1 248 aa13.89□□□□□ -0.19
PTPRF-201ENST00000359947 AAMDCQ9H7C9 122 aa13.89□□□□□ -0.19
PTPRF-201ENST00000359947 ERRFI1Q9UJM3 462 aaPredicted RBP13.89□□□□□ -0.19
PTPRF-201ENST00000359947 RCL1Q9Y2P8 373 aaKnown RBP13.89□□□□□ -0.19
PTPRF-201ENST00000359947 DCTN6O00399 190 aa13.89□□□□□ -0.19
PTPRF-201ENST00000359947 TFAP2AP05549 437 aa13.89□□□□□ -0.19
PTPRF-201ENST00000359947 TOMM34Q15785 309 aaPredicted RBP13.89□□□□□ -0.19
PTPRF-201ENST00000359947 SLC51BQ86UW2 128 aa13.89□□□□□ -0.19
PTPRF-201ENST00000359947 OR52B4Q8NGK2 314 aa13.89□□□□□ -0.19
PTPRF-201ENST00000359947 SLC25A22Q9H936 323 aa13.89□□□□□ -0.19
PTPRF-201ENST00000359947 SAP30LQ9HAJ7 183 aa13.89□□□□□ -0.19
PTPRF-201ENST00000359947 A0A1B0GTQ1 180 aa13.89□□□□□ -0.19
PTPRF-201ENST00000359947 EPHA2P29317 976 aa13.89□□□□□ -0.19
PTPRF-201ENST00000359947 DCTDP32321 178 aa13.89□□□□□ -0.19
PTPRF-201ENST00000359947 RHBDD2Q6NTF9 364 aa13.89□□□□□ -0.19
PTPRF-201ENST00000359947 CIB3Q96Q77 187 aaPredicted RBP13.89□□□□□ -0.19
PTPRF-201ENST00000359947 RPL12P30050 165 aaKnown RBP13.89□□□□□ -0.19
PTPRF-201ENST00000359947 CBLN3Q6UW01 205 aa13.89□□□□□ -0.19
PTPRF-201ENST00000359947 MRGPREQ86SM8 312 aa13.89□□□□□ -0.19
PTPRF-201ENST00000359947 ZNF547Q8IVP9 402 aa13.89□□□□□ -0.19
PTPRF-201ENST00000359947 SLC6A13Q9NSD5 602 aa13.89□□□□□ -0.19
PTPRF-201ENST00000359947 CST7O76096 145 aa13.88□□□□□ -0.19
PTPRF-201ENST00000359947 FUT3P21217 361 aa13.88□□□□□ -0.19
PTPRF-201ENST00000359947 KISS1Q15726 138 aa13.88□□□□□ -0.19
PTPRF-201ENST00000359947 RASL10BQ96S79 203 aa13.88□□□□□ -0.19
PTPRF-201ENST00000359947 GABARAPL3Q9BY60 117 aa13.88□□□□□ -0.19
PTPRF-201ENST00000359947 AQP8O94778 261 aa13.88□□□□□ -0.19
PTPRF-201ENST00000359947 TIGITQ495A1 244 aa13.88□□□□□ -0.19
PTPRF-201ENST00000359947 CDH26Q8IXH8 852 aa13.88□□□□□ -0.19
PTPRF-201ENST00000359947 M1APQ8TC57 530 aa13.88□□□□□ -0.19
PTPRF-201ENST00000359947 PAPPAQ13219 1627 aa13.88□□□□□ -0.19
PTPRF-201ENST00000359947 EPPINO95925 133 aa13.88□□□□□ -0.19
PTPRF-201ENST00000359947 THSD4Q6ZMP0 1018 aa13.88□□□□□ -0.19
PTPRF-201ENST00000359947 SLC38A6Q8IZM9 456 aa13.88□□□□□ -0.19
PTPRF-201ENST00000359947 DNAJB12Q9NXW2 375 aaKnown RBP13.88□□□□□ -0.19
PTPRF-201ENST00000359947 SLC2A8Q9NY64 477 aa13.88□□□□□ -0.19
PTPRF-201ENST00000359947 DOCK5Q9H7D0 1870 aa13.88□□□□□ -0.19
PTPRF-201ENST00000359947 FUT7Q11130 342 aa13.88□□□□□ -0.19
PTPRF-201ENST00000359947 H3F3CQ6NXT2 135 aa13.88□□□□□ -0.19
PTPRF-201ENST00000359947 TMEM56Q96MV1 263 aa13.88□□□□□ -0.19
PTPRF-201ENST00000359947 MBD1Q9UIS9 605 aaPredicted RBP13.88□□□□□ -0.19
PTPRF-201ENST00000359947 COX6B1P14854 86 aa13.88□□□□□ -0.19
PTPRF-201ENST00000359947 ZNF787Q6DD87 383 aa13.88□□□□□ -0.19
PTPRF-201ENST00000359947 TMED6Q8WW62 240 aa13.88□□□□□ -0.19
PTPRF-201ENST00000359947 ITPKCQ96DU7 683 aa13.88□□□□□ -0.19
PTPRF-201ENST00000359947 OR2D2Q9H210 308 aa13.88□□□□□ -0.19
PTPRF-201ENST00000359947 KLK11Q9UBX7 282 aa13.88□□□□□ -0.19
PTPRF-201ENST00000359947 ZNF318Q5VUA4 2279 aa13.88□□□□□ -0.19
PTPRF-201ENST00000359947 OR4A8P0C604 315 aa13.88□□□□□ -0.19
PTPRF-201ENST00000359947 NAAAQ02083 359 aa13.88□□□□□ -0.19
PTPRF-201ENST00000359947 CHODLQ9H9P2 273 aa13.88□□□□□ -0.19
PTPRF-201ENST00000359947 DDOSTP39656 456 aa13.87□□□□□ -0.19
PTPRF-201ENST00000359947 AKR1C3P42330 323 aa13.87□□□□□ -0.19
PTPRF-201ENST00000359947 FOXO1Q12778 655 aa13.87□□□□□ -0.19
PTPRF-201ENST00000359947 WDR74Q6RFH5 385 aaPredicted RBP13.87□□□□□ -0.19
PTPRF-201ENST00000359947 LYSMD2Q8IV50 215 aa13.87□□□□□ -0.19
PTPRF-201ENST00000359947 SYS1Q8N2H4 156 aa13.87□□□□□ -0.19
PTPRF-201ENST00000359947 A0A0B4J2E0 115 aa13.87□□□□□ -0.19
PTPRF-201ENST00000359947 A0A1B0GTH9 108 aa13.87□□□□□ -0.19
PTPRF-201ENST00000359947 A0A1B0GX12 115 aa13.87□□□□□ -0.19
PTPRF-201ENST00000359947 TNXAQ16473 311 aa13.87□□□□□ -0.19
PTPRF-201ENST00000359947 MOGAT3Q86VF5 341 aa13.87□□□□□ -0.19
PTPRF-201ENST00000359947 SLC25A19Q9HC21 320 aa13.87□□□□□ -0.19
PTPRF-201ENST00000359947 LAMP3Q9UQV4 416 aa13.87□□□□□ -0.19
PTPRF-201ENST00000359947 A0A0A6YYJ9 748 aa13.87□□□□□ -0.19
PTPRF-201ENST00000359947 PEX11BO96011 259 aa13.87□□□□□ -0.19
PTPRF-201ENST00000359947 Q8IYB0 196 aa13.87□□□□□ -0.19
PTPRF-201ENST00000359947 ZNF441Q8N8Z8 693 aa13.87□□□□□ -0.19
PTPRF-201ENST00000359947 ABHD3Q8WU67 409 aa13.87□□□□□ -0.19
PTPRF-201ENST00000359947 PP6455Q8WZ26 134 aa13.87□□□□□ -0.19
PTPRF-201ENST00000359947 TMEM147Q9BVK8 224 aa13.87□□□□□ -0.19
PTPRF-201ENST00000359947 OR4E1P0C645 316 aa13.87□□□□□ -0.19
PTPRF-201ENST00000359947 ZNF260Q3ZCT1 412 aa13.87□□□□□ -0.19
PTPRF-201ENST00000359947 KIAA1958Q8N8K9 716 aa13.87□□□□□ -0.19
PTPRF-201ENST00000359947 SLC25A32Q9H2D1 315 aa13.87□□□□□ -0.19
PTPRF-201ENST00000359947 HIKESHIQ53FT3 197 aa13.87□□□□□ -0.19
PTPRF-201ENST00000359947 OR1L4Q8NGR5 311 aa13.87□□□□□ -0.19
PTPRF-201ENST00000359947 OR5H6Q8NGV6 325 aa13.87□□□□□ -0.19
PTPRF-201ENST00000359947 MARC2Q969Z3 335 aa13.87□□□□□ -0.19
PTPRF-201ENST00000359947 ARHGAP5-AS1Q96IT6 56 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms