RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 CLPPQ16740 277 aaPredicted RBP13.28□□□□□ -0.28
CHD4-201ENST00000357008 MOB1BQ7L9L4 216 aa13.28□□□□□ -0.28
CHD4-201ENST00000357008 IL2RAP01589 272 aa13.28□□□□□ -0.28
CHD4-201ENST00000357008 INHBBP09529 407 aa13.28□□□□□ -0.28
CHD4-201ENST00000357008 ZNF117Q03924 483 aa13.28□□□□□ -0.28
CHD4-201ENST00000357008 TCTN1Q2MV58 587 aa13.28□□□□□ -0.28
CHD4-201ENST00000357008 OR4D10Q8NGI6 311 aa13.28□□□□□ -0.28
CHD4-201ENST00000357008 ALKBH3Q96Q83 286 aaPredicted RBP13.28□□□□□ -0.28
CHD4-201ENST00000357008 ZNF576Q9H609 170 aa13.28□□□□□ -0.28
CHD4-201ENST00000357008 LOC102723971A0A1B0GUV8 181 aa13.28□□□□□ -0.28
CHD4-201ENST00000357008 OR2W5A6NFC9 320 aa13.28□□□□□ -0.28
CHD4-201ENST00000357008 ADAM20O43506 726 aa13.28□□□□□ -0.28
CHD4-201ENST00000357008 DHRS3O75911 302 aa13.28□□□□□ -0.28
CHD4-201ENST00000357008 KRASP01116 189 aa13.28□□□□□ -0.28
CHD4-201ENST00000357008 ASCL1P50553 236 aa13.28□□□□□ -0.28
CHD4-201ENST00000357008 MYBPHQ13203 477 aa13.28□□□□□ -0.28
CHD4-201ENST00000357008 STPG2Q8N412 459 aa13.28□□□□□ -0.28
CHD4-201ENST00000357008 NAA60Q9H7X0 242 aa13.28□□□□□ -0.28
CHD4-201ENST00000357008 MAP1LC3B2A6NCE7 125 aa13.27□□□□□ -0.28
CHD4-201ENST00000357008 CCR2P41597 374 aa13.27□□□□□ -0.28
CHD4-201ENST00000357008 SELENOPP49908 381 aa13.27□□□□□ -0.28
CHD4-201ENST00000357008 B3GNTL1Q67FW5 361 aaPredicted RBP13.27□□□□□ -0.28
CHD4-201ENST00000357008 DMKNQ6E0U4 476 aaPredicted RBP13.27□□□□□ -0.28
CHD4-201ENST00000357008 OR2C3Q8N628 320 aa13.27□□□□□ -0.28
CHD4-201ENST00000357008 ZG16BQ96DA0 208 aa13.27□□□□□ -0.28
CHD4-201ENST00000357008 MAP1LC3BQ9GZQ8 125 aa13.27□□□□□ -0.28
CHD4-201ENST00000357008 FBXL17Q9UF56 701 aa13.27□□□□□ -0.28
CHD4-201ENST00000357008 OR5I1Q13606 314 aa13.27□□□□□ -0.28
CHD4-201ENST00000357008 TMEM196Q5HYL7 178 aa13.27□□□□□ -0.28
CHD4-201ENST00000357008 FFAR4Q5NUL3 377 aa13.27□□□□□ -0.28
CHD4-201ENST00000357008 TRIB1Q96RU8 372 aa13.27□□□□□ -0.28
CHD4-201ENST00000357008 OCIAD1Q9NX40 245 aa13.27□□□□□ -0.28
CHD4-201ENST00000357008 LSM2Q9Y333 95 aaKnown RBP13.27□□□□□ -0.28
CHD4-201ENST00000357008 TIMM9Q9Y5J7 89 aa13.27□□□□□ -0.28
CHD4-201ENST00000357008 HTRA3P83110 453 aa13.27□□□□□ -0.29
CHD4-201ENST00000357008 BVESQ8NE79 360 aa13.27□□□□□ -0.29
CHD4-201ENST00000357008 ZNF275Q9NSD4 429 aaPredicted RBP13.27□□□□□ -0.29
CHD4-201ENST00000357008 GNG3P63215 75 aa13.27□□□□□ -0.29
CHD4-201ENST00000357008 SLC38A11Q08AI6 406 aa13.27□□□□□ -0.29
CHD4-201ENST00000357008 C9orf152Q5JTZ5 239 aa13.27□□□□□ -0.29
CHD4-201ENST00000357008 LINC00052Q96N35 136 aa13.27□□□□□ -0.29
CHD4-201ENST00000357008 USF1P22415 310 aaPredicted RBP13.27□□□□□ -0.29
CHD4-201ENST00000357008 THSD4Q6ZMP0 1018 aa13.27□□□□□ -0.29
CHD4-201ENST00000357008 TSPAN32Q96QS1 320 aa13.27□□□□□ -0.29
CHD4-201ENST00000357008 GOLT1BQ9Y3E0 138 aa13.27□□□□□ -0.29
CHD4-201ENST00000357008 C3orf85A0A1B0GTC6 90 aa13.26□□□□□ -0.29
CHD4-201ENST00000357008 GABRA1P14867 456 aa13.26□□□□□ -0.29
CHD4-201ENST00000357008 CDKN2AP42771 156 aaKnown RBP13.26□□□□□ -0.29
CHD4-201ENST00000357008 FAM3AP98173 230 aa13.26□□□□□ -0.29
CHD4-201ENST00000357008 FMODQ06828 376 aa13.26□□□□□ -0.29
CHD4-201ENST00000357008 TMEM267Q0VDI3 215 aaPredicted RBP13.26□□□□□ -0.29
CHD4-201ENST00000357008 MRGPREQ86SM8 312 aa13.26□□□□□ -0.29
CHD4-201ENST00000357008 DDX60LQ5H9U9 1706 aaKnown RBP13.26□□□□□ -0.29
CHD4-201ENST00000357008 AP4M1O00189 453 aa13.26□□□□□ -0.29
CHD4-201ENST00000357008 ST8SIA5O15466 376 aa13.26□□□□□ -0.29
CHD4-201ENST00000357008 INPP5JQ15735 1006 aaPredicted RBP13.26□□□□□ -0.29
CHD4-201ENST00000357008 OR2A2Q6IF42 318 aa13.26□□□□□ -0.29
CHD4-201ENST00000357008 FA2HQ7L5A8 372 aa13.26□□□□□ -0.29
CHD4-201ENST00000357008 MS4A10Q96PG2 267 aa13.26□□□□□ -0.29
CHD4-201ENST00000357008 ATP23Q9Y6H3 246 aa13.26□□□□□ -0.29
CHD4-201ENST00000357008 TOX3O15405 576 aaPredicted RBP13.26□□□□□ -0.29
CHD4-201ENST00000357008 PRDX4Q13162 271 aa13.26□□□□□ -0.29
CHD4-201ENST00000357008 TMEM183BQ1AE95 376 aa13.26□□□□□ -0.29
CHD4-201ENST00000357008 AMER3Q8N944 861 aa13.26□□□□□ -0.29
CHD4-201ENST00000357008 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.26□□□□□ -0.29
CHD4-201ENST00000357008 NAT8BQ9UHF3 227 aa13.26□□□□□ -0.29
CHD4-201ENST00000357008 LAMB1P07942 1786 aa13.26□□□□□ -0.29
CHD4-201ENST00000357008 TMEM218A2RU14 115 aa13.26□□□□□ -0.29
CHD4-201ENST00000357008 CDC14BO60729 498 aa13.26□□□□□ -0.29
CHD4-201ENST00000357008 PAX5Q02548 391 aa13.26□□□□□ -0.29
CHD4-201ENST00000357008 JMJD6Q6NYC1 403 aaPredicted RBP13.26□□□□□ -0.29
CHD4-201ENST00000357008 C9orf62Q8N4C0 152 aa13.26□□□□□ -0.29
CHD4-201ENST00000357008 EVPLQ92817 2033 aa13.26□□□□□ -0.29
CHD4-201ENST00000357008 SPTY2D1-AS1A0A0U1RR47 76 aa13.26□□□□□ -0.29
CHD4-201ENST00000357008 ETFDHQ16134 617 aa13.26□□□□□ -0.29
CHD4-201ENST00000357008 PRICKLE4Q2TBC4 344 aa13.26□□□□□ -0.29
CHD4-201ENST00000357008 TCTEX1D1Q8N7M0 179 aa13.26□□□□□ -0.29
CHD4-201ENST00000357008 LPAR3Q9UBY5 353 aa13.26□□□□□ -0.29
CHD4-201ENST00000357008 CXCL10P02778 98 aa13.25□□□□□ -0.29
CHD4-201ENST00000357008 SEZ6L2Q6UXD5 910 aa13.25□□□□□ -0.29
CHD4-201ENST00000357008 FAM24AA6NFZ4 105 aa13.25□□□□□ -0.29
CHD4-201ENST00000357008 CCKARP32238 428 aa13.25□□□□□ -0.29
CHD4-201ENST00000357008 HLA-DRB3P79483 266 aa13.25□□□□□ -0.29
CHD4-201ENST00000357008 TMEM230Q96A57 120 aa13.25□□□□□ -0.29
CHD4-201ENST00000357008 FAAP24Q9BTP7 215 aa13.25□□□□□ -0.29
CHD4-201ENST00000357008 CDC42EP2O14613 210 aa13.25□□□□□ -0.29
CHD4-201ENST00000357008 SDHBP21912 280 aa13.25□□□□□ -0.29
CHD4-201ENST00000357008 ZNF596Q8TC21 504 aa13.25□□□□□ -0.29
CHD4-201ENST00000357008 A0A1B0GTH9 108 aa13.25□□□□□ -0.29
CHD4-201ENST00000357008 LINC01387J3KSC0 135 aa13.25□□□□□ -0.29
CHD4-201ENST00000357008 OGG1O15527 345 aa13.25□□□□□ -0.29
CHD4-201ENST00000357008 GPR3P46089 330 aa13.25□□□□□ -0.29
CHD4-201ENST00000357008 PWWP2BQ6NUJ5 590 aa13.25□□□□□ -0.29
CHD4-201ENST00000357008 BHLHA9Q7RTU4 235 aa13.25□□□□□ -0.29
CHD4-201ENST00000357008 ACY3Q96HD9 319 aa13.25□□□□□ -0.29
CHD4-201ENST00000357008 ERRFI1Q9UJM3 462 aaPredicted RBP13.25□□□□□ -0.29
CHD4-201ENST00000357008 TRGV10A0A0A0MS01 117 aa13.25□□□□□ -0.29
CHD4-201ENST00000357008 SLC22A20A6NK97 555 aa13.25□□□□□ -0.29
CHD4-201ENST00000357008 RER1O15258 196 aa13.25□□□□□ -0.29
CHD4-201ENST00000357008 ZNF737O75373 536 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms