RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 RABIFP47224 123 aa13.89□□□□□ -0.19
CTDSP1-201ENST00000273062 ASCL1P50553 236 aa13.89□□□□□ -0.19
CTDSP1-201ENST00000273062 CLDN6P56747 220 aa13.89□□□□□ -0.19
CTDSP1-201ENST00000273062 TLE4Q04727 773 aa13.89□□□□□ -0.19
CTDSP1-201ENST00000273062 ADGRE4PQ86SQ3 457 aa13.89□□□□□ -0.19
CTDSP1-201ENST00000273062 PATE1Q8WXA2 126 aa13.89□□□□□ -0.19
CTDSP1-201ENST00000273062 TSLPQ969D9 159 aa13.89□□□□□ -0.19
CTDSP1-201ENST00000273062 ZNF764Q96H86 408 aaPredicted RBP13.89□□□□□ -0.19
CTDSP1-201ENST00000273062 HIST1H2AAQ96QV6 131 aa13.89□□□□□ -0.19
CTDSP1-201ENST00000273062 OR8D2Q9GZM6 311 aa13.89□□□□□ -0.19
CTDSP1-201ENST00000273062 GPR173Q9NS66 373 aa13.89□□□□□ -0.19
CTDSP1-201ENST00000273062 CCL25O15444 150 aa13.89□□□□□ -0.19
CTDSP1-201ENST00000273062 DNAJB6O75190 326 aa13.89□□□□□ -0.19
CTDSP1-201ENST00000273062 SCGB1D1O95968 90 aa13.89□□□□□ -0.19
CTDSP1-201ENST00000273062 MMP16P51512 607 aa13.89□□□□□ -0.19
CTDSP1-201ENST00000273062 HSF1Q00613 529 aa13.89□□□□□ -0.19
CTDSP1-201ENST00000273062 SPOCK1Q08629 439 aa13.89□□□□□ -0.19
CTDSP1-201ENST00000273062 FOXF1Q12946 379 aa13.89□□□□□ -0.19
CTDSP1-201ENST00000273062 TDRG1Q3Y452 100 aa13.89□□□□□ -0.19
CTDSP1-201ENST00000273062 DPY19L4Q7Z388 723 aa13.89□□□□□ -0.19
CTDSP1-201ENST00000273062 DCXRQ7Z4W1 244 aa13.89□□□□□ -0.19
CTDSP1-201ENST00000273062 MRPL41Q8IXM3 137 aaKnown RBP13.89□□□□□ -0.19
CTDSP1-201ENST00000273062 TAAR8Q969N4 342 aa13.89□□□□□ -0.19
CTDSP1-201ENST00000273062 SCARF2Q96GP6 870 aaPredicted RBP13.89□□□□□ -0.19
CTDSP1-201ENST00000273062 ARV1Q9H2C2 271 aa13.89□□□□□ -0.19
CTDSP1-201ENST00000273062 WDR76Q9H967 626 aa13.89□□□□□ -0.19
CTDSP1-201ENST00000273062 TMEM74BQ9NUR3 256 aa13.89□□□□□ -0.19
CTDSP1-201ENST00000273062 ZNF107Q9UII5 783 aaPredicted RBP13.89□□□□□ -0.19
CTDSP1-201ENST00000273062 ADAM29Q9UKF5 820 aa13.89□□□□□ -0.19
CTDSP1-201ENST00000273062 V9GYS6 101 aa13.89□□□□□ -0.19
CTDSP1-201ENST00000273062 A0A1B0GWA3 101 aa13.88□□□□□ -0.19
CTDSP1-201ENST00000273062 NDUFB2O95178 105 aa13.88□□□□□ -0.19
CTDSP1-201ENST00000273062 SCGB1D2O95969 90 aa13.88□□□□□ -0.19
CTDSP1-201ENST00000273062 LCATP04180 440 aa13.88□□□□□ -0.19
CTDSP1-201ENST00000273062 OR5AC1P0C628 307 aa13.88□□□□□ -0.19
CTDSP1-201ENST00000273062 SEC11BP0C7V7 166 aa13.88□□□□□ -0.19
CTDSP1-201ENST00000273062 MMP9P14780 707 aa13.88□□□□□ -0.19
CTDSP1-201ENST00000273062 IAH1Q2TAA2 248 aaPredicted RBP13.88□□□□□ -0.19
CTDSP1-201ENST00000273062 WDR25Q64LD2 544 aaPredicted RBP13.88□□□□□ -0.19
CTDSP1-201ENST00000273062 TMEM225Q6GV28 225 aa13.88□□□□□ -0.19
CTDSP1-201ENST00000273062 PTCRAQ6ISU1 281 aaPredicted RBP13.88□□□□□ -0.19
CTDSP1-201ENST00000273062 ARMC6Q6NXE6 501 aa13.88□□□□□ -0.19
CTDSP1-201ENST00000273062 RCBTB1Q8NDN9 531 aa13.88□□□□□ -0.19
CTDSP1-201ENST00000273062 TVP23CQ96ET8 276 aa13.88□□□□□ -0.19
CTDSP1-201ENST00000273062 C4orf45Q96LM5 186 aa13.88□□□□□ -0.19
CTDSP1-201ENST00000273062 SDF2Q99470 211 aa13.88□□□□□ -0.19
CTDSP1-201ENST00000273062 LPAR4Q99677 370 aa13.88□□□□□ -0.19
CTDSP1-201ENST00000273062 TMEM212A6NML5 194 aa13.88□□□□□ -0.19
CTDSP1-201ENST00000273062 M0QZK8 103 aa13.88□□□□□ -0.19
CTDSP1-201ENST00000273062 ZNF264O43296 627 aa13.88□□□□□ -0.19
CTDSP1-201ENST00000273062 GGCTO75223 188 aaKnown RBP13.88□□□□□ -0.19
CTDSP1-201ENST00000273062 ZNF217O75362 1048 aa13.88□□□□□ -0.19
CTDSP1-201ENST00000273062 DUSP8Q13202 625 aa13.88□□□□□ -0.19
CTDSP1-201ENST00000273062 IQCJQ1A5X6 159 aa13.88□□□□□ -0.19
CTDSP1-201ENST00000273062 PLXDC2Q6UX71 529 aa13.88□□□□□ -0.19
CTDSP1-201ENST00000273062 VN1R4Q7Z5H5 301 aa13.88□□□□□ -0.19
CTDSP1-201ENST00000273062 OR4D6Q8NGJ1 314 aa13.88□□□□□ -0.19
CTDSP1-201ENST00000273062 OR1L6Q8NGR2 347 aa13.88□□□□□ -0.19
CTDSP1-201ENST00000273062 PRRX2Q99811 253 aa13.88□□□□□ -0.19
CTDSP1-201ENST00000273062 GINS3Q9BRX5 216 aa13.88□□□□□ -0.19
CTDSP1-201ENST00000273062 RTBDNQ9BSG5 229 aaPredicted RBP13.88□□□□□ -0.19
CTDSP1-201ENST00000273062 SRA1Q9HD15 236 aaKnown RBP13.88□□□□□ -0.19
CTDSP1-201ENST00000273062 GPR132Q9UNW8 380 aa13.88□□□□□ -0.19
CTDSP1-201ENST00000273062 ENTPD2Q9Y5L3 495 aa13.88□□□□□ -0.19
CTDSP1-201ENST00000273062 HPRT1P00492 218 aa13.87□□□□□ -0.19
CTDSP1-201ENST00000273062 JMJD7P0C870 316 aa13.87□□□□□ -0.19
CTDSP1-201ENST00000273062 CSNK2A2P19784 350 aaPredicted RBP13.87□□□□□ -0.19
CTDSP1-201ENST00000273062 CD33P20138 364 aa13.87□□□□□ -0.19
CTDSP1-201ENST00000273062 GLRA1P23415 457 aa13.87□□□□□ -0.19
CTDSP1-201ENST00000273062 BTN3A2P78410 334 aa13.87□□□□□ -0.19
CTDSP1-201ENST00000273062 RAB30Q15771 203 aa13.87□□□□□ -0.19
CTDSP1-201ENST00000273062 ZNF542PQ5EBM4 170 aa13.87□□□□□ -0.19
CTDSP1-201ENST00000273062 CDCP2Q5VXM1 449 aa13.87□□□□□ -0.19
CTDSP1-201ENST00000273062 EXD3Q8N9H8 876 aa13.87□□□□□ -0.19
CTDSP1-201ENST00000273062 OR2AJ1Q8NGZ0 328 aa13.87□□□□□ -0.19
CTDSP1-201ENST00000273062 NIPSNAP3BQ9BS92 247 aa13.87□□□□□ -0.19
CTDSP1-201ENST00000273062 RAB11FIP5Q9BXF6 653 aa13.87□□□□□ -0.19
CTDSP1-201ENST00000273062 OR2J1Q9GZK6 312 aa13.87□□□□□ -0.19
CTDSP1-201ENST00000273062 CKLFQ9UBR5 152 aa13.87□□□□□ -0.19
CTDSP1-201ENST00000273062 DEDDO75618 318 aa13.87□□□□□ -0.19
CTDSP1-201ENST00000273062 CEACAM1P13688 526 aa13.87□□□□□ -0.19
CTDSP1-201ENST00000273062 TAS2R31P59538 309 aa13.87□□□□□ -0.19
CTDSP1-201ENST00000273062 GNB2P62879 340 aa13.87□□□□□ -0.19
CTDSP1-201ENST00000273062 SPSB3Q6PJ21 355 aa13.87□□□□□ -0.19
CTDSP1-201ENST00000273062 SLC35D2Q76EJ3 337 aa13.87□□□□□ -0.19
CTDSP1-201ENST00000273062 OR6N2Q8NGY6 317 aa13.87□□□□□ -0.19
CTDSP1-201ENST00000273062 OR10G6Q8NH81 332 aa13.87□□□□□ -0.19
CTDSP1-201ENST00000273062 METTL21AQ8WXB1 218 aa13.87□□□□□ -0.19
CTDSP1-201ENST00000273062 FAM122AQ96E09 287 aa13.87□□□□□ -0.19
CTDSP1-201ENST00000273062 C5orf34Q96MH7 638 aa13.87□□□□□ -0.19
CTDSP1-201ENST00000273062 FOXN4Q96NZ1 517 aa13.87□□□□□ -0.19
CTDSP1-201ENST00000273062 CES1P1Q9UKY3 287 aa13.87□□□□□ -0.19
CTDSP1-201ENST00000273062 MRPS2Q9Y399 296 aaKnown RBP13.87□□□□□ -0.19
CTDSP1-201ENST00000273062 GON4LQ3T8J9 2241 aa13.87□□□□□ -0.19
CTDSP1-201ENST00000273062 A0A0B4J2E0 115 aa13.86□□□□□ -0.19
CTDSP1-201ENST00000273062 A0A1B0GX12 115 aa13.86□□□□□ -0.19
CTDSP1-201ENST00000273062 A0A1W2PPQ1 181 aa13.86□□□□□ -0.19
CTDSP1-201ENST00000273062 K7N7A8 449 aa13.86□□□□□ -0.19
CTDSP1-201ENST00000273062 PNPP00491 289 aa13.86□□□□□ -0.19
CTDSP1-201ENST00000273062 GSTP1P09211 210 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms