RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 FUT6P51993 359 aa10.25□□□□□ -0.77
PTPN4-201ENST00000263708 AMMECR1LQ6DCA0 310 aa10.25□□□□□ -0.77
PTPN4-201ENST00000263708 SLC26A1Q9H2B4 701 aa10.25□□□□□ -0.77
PTPN4-201ENST00000263708 PSG11Q9UQ72 335 aa10.25□□□□□ -0.77
PTPN4-201ENST00000263708 PHIPQ8WWQ0 1821 aa10.25□□□□□ -0.77
PTPN4-201ENST00000263708 OR4E1P0C645 316 aa10.25□□□□□ -0.77
PTPN4-201ENST00000263708 FAHP16930 419 aa10.25□□□□□ -0.77
PTPN4-201ENST00000263708 TCEAL1Q15170 157 aa10.25□□□□□ -0.77
PTPN4-201ENST00000263708 FAM210BQ96KR6 192 aa10.25□□□□□ -0.77
PTPN4-201ENST00000263708 OCIAD1Q9NX40 245 aa10.25□□□□□ -0.77
PTPN4-201ENST00000263708 TRGV5A0A0B4J1U4 118 aa10.25□□□□□ -0.77
PTPN4-201ENST00000263708 FECHP22830 423 aa10.25□□□□□ -0.77
PTPN4-201ENST00000263708 TMEM99Q8N816 258 aa10.25□□□□□ -0.77
PTPN4-201ENST00000263708 PIKFYVEQ9Y2I7 2098 aa10.25□□□□□ -0.77
PTPN4-201ENST00000263708 PRSS37A4D1T9 235 aa10.25□□□□□ -0.77
PTPN4-201ENST00000263708 KCNJ3P48549 501 aa10.25□□□□□ -0.77
PTPN4-201ENST00000263708 C19orf57Q0VDD7 668 aa10.25□□□□□ -0.77
PTPN4-201ENST00000263708 FZD2Q14332 565 aa10.25□□□□□ -0.77
PTPN4-201ENST00000263708 ABHD17CQ6PCB6 329 aa10.25□□□□□ -0.77
PTPN4-201ENST00000263708 TCTEX1D1Q8N7M0 179 aa10.25□□□□□ -0.77
PTPN4-201ENST00000263708 LKAAEAR1Q8TD35 194 aa10.25□□□□□ -0.77
PTPN4-201ENST00000263708 MED30Q96HR3 178 aa10.25□□□□□ -0.77
PTPN4-201ENST00000263708 NAA60Q9H7X0 242 aa10.25□□□□□ -0.77
PTPN4-201ENST00000263708 VSIG4Q9Y279 399 aa10.25□□□□□ -0.77
PTPN4-201ENST00000263708 HLXQ14774 488 aaPredicted RBP10.25□□□□□ -0.77
PTPN4-201ENST00000263708 DHRS13Q6UX07 377 aa10.25□□□□□ -0.77
PTPN4-201ENST00000263708 ZNF71Q9NQZ8 489 aaPredicted RBP10.25□□□□□ -0.77
PTPN4-201ENST00000263708 C5P01031 1676 aa10.25□□□□□ -0.77
PTPN4-201ENST00000263708 TRAV20A0A0B4J274 112 aa10.25□□□□□ -0.77
PTPN4-201ENST00000263708 MIDNQ504T8 468 aa10.25□□□□□ -0.77
PTPN4-201ENST00000263708 ZBTB44Q8NCP5 570 aa10.25□□□□□ -0.77
PTPN4-201ENST00000263708 LMO3Q8TAP4 145 aa10.25□□□□□ -0.77
PTPN4-201ENST00000263708 LAMB4A4D0S4 1761 aa10.25□□□□□ -0.77
PTPN4-201ENST00000263708 HEATR5BQ9P2D3 2071 aa10.25□□□□□ -0.77
PTPN4-201ENST00000263708 RPLP1P05386 114 aaKnown RBP10.25□□□□□ -0.77
PTPN4-201ENST00000263708 SCN8AQ9UQD0 1980 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 ZNF324O75467 553 aaPredicted RBP10.24□□□□□ -0.77
PTPN4-201ENST00000263708 ACTL6AO96019 429 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 ZGLP1P0C6A0 271 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 LYG2Q86SG7 212 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 POM121Q96HA1 1249 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 TEAD3Q99594 435 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 DPH3P1Q9H4G8 78 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 ZNF737O75373 536 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 CEACAM3P40198 252 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 OR52B4Q8NGK2 314 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 DYRK2Q92630 601 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 HGDQ93099 445 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 SGK494Q96LW2 274 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 SEC11CQ9BY50 192 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 FLVCR2Q9UPI3 526 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 IGHV3-43A0A0B4J1X8 118 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 KLF7O75840 302 aaPredicted RBP10.24□□□□□ -0.77
PTPN4-201ENST00000263708 IGHV3-43DP0DP04 118 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 ARRB2P32121 409 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 FGF8P55075 233 aaPredicted RBP10.24□□□□□ -0.77
PTPN4-201ENST00000263708 TNFAIP6P98066 277 aaPredicted RBP10.24□□□□□ -0.77
PTPN4-201ENST00000263708 SIX1Q15475 284 aaPredicted RBP10.24□□□□□ -0.77
PTPN4-201ENST00000263708 ACSM5Q6NUN0 579 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 ZNF547Q8IVP9 402 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 NKAIN4Q8IVV8 208 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 LAT2Q9GZY6 243 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 TBC1D29Q9UFV1 150 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 APC2O95996 2303 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 IGHV3OR16-12A0A075B7B8 117 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 SEMA7AO75326 666 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 BSGP35613 385 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 LIMK1P53667 647 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 ZNF252P-AS1Q0IIN9 211 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 IGFBP7Q16270 282 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 LRP11Q86VZ4 500 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 MORN4Q8NDC4 146 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 ZNF426Q9BUY5 554 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 KCNK15Q9H427 330 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 PLA2G3Q9NZ20 509 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 LOC389332A0A1B0GUA5 103 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 ADAM20O43506 726 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 TIAL1Q01085 375 aaKnown RBP eCLIP10.24□□□□□ -0.779e-7■■■■□ 22.7
PTPN4-201ENST00000263708 PRSS8Q16651 343 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 MORN1Q5T089 497 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 ANKRD53Q8N9V6 530 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 APOBEC3DQ96AK3 386 aaPredicted RBP10.24□□□□□ -0.77
PTPN4-201ENST00000263708 OR2D2Q9H210 308 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 MYO5AQ9Y4I1 1855 aaKnown RBP10.24□□□□□ -0.77
PTPN4-201ENST00000263708 PDCD1Q15116 288 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 FAHD2AQ96GK7 314 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 MS4A10Q96PG2 267 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 SLC45A2Q9UMX9 530 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 AGERQ15109 404 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 LYSMD2Q8IV50 215 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 ATOH8Q96SQ7 321 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 PRDM7Q9NQW5 492 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 GFYI3L273 518 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 SPTBP11277 2137 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 COTL1Q14019 142 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 TMUB1Q9BVT8 246 aa10.24□□□□□ -0.77
PTPN4-201ENST00000263708 DEDDO75618 318 aa10.23□□□□□ -0.77
PTPN4-201ENST00000263708 CA6P23280 308 aa10.23□□□□□ -0.77
PTPN4-201ENST00000263708 MMP11P24347 488 aa10.23□□□□□ -0.77
PTPN4-201ENST00000263708 SYT14P1Q58G82 188 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms