RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 ABCB10Q9NRK6 738 aa11.09□□□□□ -0.63
SNX1-214ENST00000625244 SNTG1Q9NSN8 517 aa11.09□□□□□ -0.63
SNX1-214ENST00000625244 ZNF391Q9UJN7 358 aa11.09□□□□□ -0.63
SNX1-214ENST00000625244 PITPNC1Q9UKF7 332 aa11.09□□□□□ -0.63
SNX1-214ENST00000625244 LHFPL6Q9Y693 200 aa11.09□□□□□ -0.63
SNX1-214ENST00000625244 TRAV27A0A087WT01 109 aa11.08□□□□□ -0.64
SNX1-214ENST00000625244 IMPA2O14732 288 aa11.08□□□□□ -0.64
SNX1-214ENST00000625244 FFAR1O14842 300 aa11.08□□□□□ -0.64
SNX1-214ENST00000625244 IFI30P13284 250 aa11.08□□□□□ -0.64
SNX1-214ENST00000625244 ANOS1P23352 680 aa11.08□□□□□ -0.64
SNX1-214ENST00000625244 COX7A1P24310 79 aa11.08□□□□□ -0.64
SNX1-214ENST00000625244 LUMP51884 338 aaPredicted RBP11.08□□□□□ -0.64
SNX1-214ENST00000625244 GMFBP60983 142 aa11.08□□□□□ -0.64
SNX1-214ENST00000625244 CSNK2BP67870 215 aa11.08□□□□□ -0.64
SNX1-214ENST00000625244 ZNF92Q03936 586 aa11.08□□□□□ -0.64
SNX1-214ENST00000625244 MESTQ5EB52 335 aa11.08□□□□□ -0.64
SNX1-214ENST00000625244 KCTD18Q6PI47 426 aaPredicted RBP11.08□□□□□ -0.64
SNX1-214ENST00000625244 WDR82Q6UXN9 313 aa11.08□□□□□ -0.64
SNX1-214ENST00000625244 ZNF788Q6ZQV5 615 aa11.08□□□□□ -0.64
SNX1-214ENST00000625244 MBOAT2Q6ZWT7 520 aa11.08□□□□□ -0.64
SNX1-214ENST00000625244 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.08□□□□□ -0.64
SNX1-214ENST00000625244 GLB1L2Q8IW92 636 aa11.08□□□□□ -0.64
SNX1-214ENST00000625244 C10orf67Q8IYJ2 551 aa11.08□□□□□ -0.64
SNX1-214ENST00000625244 GJC3Q8NFK1 279 aa11.08□□□□□ -0.64
SNX1-214ENST00000625244 OR51D1Q8NGF3 324 aa11.08□□□□□ -0.64
SNX1-214ENST00000625244 OR52J3Q8NH60 311 aa11.08□□□□□ -0.64
SNX1-214ENST00000625244 OR51A7Q8NH64 312 aa11.08□□□□□ -0.64
SNX1-214ENST00000625244 BPIFA2Q96DR5 249 aa11.08□□□□□ -0.64
SNX1-214ENST00000625244 REEP1Q9H902 201 aa11.08□□□□□ -0.64
SNX1-214ENST00000625244 MRPL15Q9P015 296 aaKnown RBP11.08□□□□□ -0.64
SNX1-214ENST00000625244 POLR1DQ9Y2S0 133 aa11.08□□□□□ -0.64
SNX1-214ENST00000625244 ADAM18Q9Y3Q7 739 aa11.08□□□□□ -0.64
SNX1-214ENST00000625244 PRSS37A4D1T9 235 aa11.07□□□□□ -0.64
SNX1-214ENST00000625244 TNFRSF11BO00300 401 aa11.07□□□□□ -0.64
SNX1-214ENST00000625244 SLC16A7O60669 478 aa11.07□□□□□ -0.64
SNX1-214ENST00000625244 CST1P01037 141 aa11.07□□□□□ -0.64
SNX1-214ENST00000625244 JUNBP17275 347 aaPredicted RBP11.07□□□□□ -0.64
SNX1-214ENST00000625244 ECI1P42126 302 aa11.07□□□□□ -0.64
SNX1-214ENST00000625244 MAGEA2P43356 314 aa11.07□□□□□ -0.64
SNX1-214ENST00000625244 ERVFRD-1P60508 538 aa11.07□□□□□ -0.64
SNX1-214ENST00000625244 MEP1BQ16820 701 aa11.07□□□□□ -0.64
SNX1-214ENST00000625244 LDLRAD2Q5SZI1 272 aa11.07□□□□□ -0.64
SNX1-214ENST00000625244 OR2T5Q6IEZ7 315 aa11.07□□□□□ -0.64
SNX1-214ENST00000625244 C18orf65Q6ZTR6 163 aa11.07□□□□□ -0.64
SNX1-214ENST00000625244 NRMQ8IXM6 262 aa11.07□□□□□ -0.64
SNX1-214ENST00000625244 ADGRG5Q8IZF4 528 aa11.07□□□□□ -0.64
SNX1-214ENST00000625244 FAM185AQ8N0U4 392 aa11.07□□□□□ -0.64
SNX1-214ENST00000625244 LINC00471Q8N535 108 aa11.07□□□□□ -0.64
SNX1-214ENST00000625244 OR2T29Q8NH02 315 aa11.07□□□□□ -0.64
SNX1-214ENST00000625244 OR2AE1Q8NHA4 323 aa11.07□□□□□ -0.64
SNX1-214ENST00000625244 CANT1Q8WVQ1 401 aa11.07□□□□□ -0.64
SNX1-214ENST00000625244 Q96M85 177 aa11.07□□□□□ -0.64
SNX1-214ENST00000625244 HEXA-AS1Q9H8Q6 139 aa11.07□□□□□ -0.64
SNX1-214ENST00000625244 C14orf119Q9NWQ9 140 aa11.07□□□□□ -0.64
SNX1-214ENST00000625244 HAO2Q9NYQ3 351 aa11.07□□□□□ -0.64
SNX1-214ENST00000625244 A0A087WUU8 490 aa11.06□□□□□ -0.64
SNX1-214ENST00000625244 TCRBV3S1A0A5B6 114 aa11.06□□□□□ -0.64
SNX1-214ENST00000625244 GGT3PA6NGU5 568 aa11.06□□□□□ -0.64
SNX1-214ENST00000625244 EFCAB9A8MZ26 197 aa11.06□□□□□ -0.64
SNX1-214ENST00000625244 BHLHE40O14503 412 aa11.06□□□□□ -0.64
SNX1-214ENST00000625244 KHDRBS3O75525 346 aaKnown RBP11.06□□□□□ -0.64
SNX1-214ENST00000625244 RHBDL1O75783 438 aa11.06□□□□□ -0.64
SNX1-214ENST00000625244 JTBO76095 146 aa11.06□□□□□ -0.64
SNX1-214ENST00000625244 GLCEO94923 617 aa11.06□□□□□ -0.64
SNX1-214ENST00000625244 GRK5P34947 590 aa11.06□□□□□ -0.64
SNX1-214ENST00000625244 GGT2P36268 569 aa11.06□□□□□ -0.64
SNX1-214ENST00000625244 SLC9A3P48764 834 aa11.06□□□□□ -0.64
SNX1-214ENST00000625244 CAV3P56539 151 aa11.06□□□□□ -0.64
SNX1-214ENST00000625244 PRKCDQ05655 676 aa11.06□□□□□ -0.64
SNX1-214ENST00000625244 GK3PQ14409 553 aa11.06□□□□□ -0.64
SNX1-214ENST00000625244 KCNMB1Q16558 191 aa11.06□□□□□ -0.64
SNX1-214ENST00000625244 ZSCAN26Q16670 478 aa11.06□□□□□ -0.64
SNX1-214ENST00000625244 SNAI3Q3KNW1 292 aa11.06□□□□□ -0.64
SNX1-214ENST00000625244 ANKDD1AQ495B1 522 aa11.06□□□□□ -0.64
SNX1-214ENST00000625244 C8orf86Q6ZUL3 223 aa11.06□□□□□ -0.64
SNX1-214ENST00000625244 DPY19L4Q7Z388 723 aa11.06□□□□□ -0.64
SNX1-214ENST00000625244 OAFQ86UD1 273 aa11.06□□□□□ -0.64
SNX1-214ENST00000625244 LNX2Q8N448 690 aa11.06□□□□□ -0.64
SNX1-214ENST00000625244 C11orf42Q8N5U0 333 aa11.06□□□□□ -0.64
SNX1-214ENST00000625244 OR1M1Q8NGA1 313 aa11.06□□□□□ -0.64
SNX1-214ENST00000625244 OR52H1Q8NGJ2 320 aa11.06□□□□□ -0.64
SNX1-214ENST00000625244 DHRS1Q96LJ7 313 aa11.06□□□□□ -0.64
SNX1-214ENST00000625244 DNTTIP1Q9H147 329 aa11.06□□□□□ -0.64
SNX1-214ENST00000625244 WDR13Q9H1Z4 485 aa11.06□□□□□ -0.64
SNX1-214ENST00000625244 SYT4Q9H2B2 425 aa11.06□□□□□ -0.64
SNX1-214ENST00000625244 GRHPRQ9UBQ7 328 aa11.06□□□□□ -0.64
SNX1-214ENST00000625244 SAMHD1Q9Y3Z3 626 aaKnown RBP11.06□□□□□ -0.64
SNX1-214ENST00000625244 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.05□□□□□ -0.64
SNX1-214ENST00000625244 TRBV4-1A0A0J9YWV2 114 aa11.05□□□□□ -0.64
SNX1-214ENST00000625244 XKRYO14609 159 aa11.05□□□□□ -0.64
SNX1-214ENST00000625244 SIGLEC5O15389 551 aa11.05□□□□□ -0.64
SNX1-214ENST00000625244 AHCYL1O43865 530 aa11.05□□□□□ -0.64
SNX1-214ENST00000625244 FKBP6O75344 327 aa11.05□□□□□ -0.64
SNX1-214ENST00000625244 E2F6O75461 281 aa11.05□□□□□ -0.64
SNX1-214ENST00000625244 SDHAP31040 664 aa11.05□□□□□ -0.64
SNX1-214ENST00000625244 CEBPDP49716 269 aaPredicted RBP11.05□□□□□ -0.64
SNX1-214ENST00000625244 MZT1Q08AG7 82 aa11.05□□□□□ -0.64
SNX1-214ENST00000625244 SSX2Q16385 188 aa11.05□□□□□ -0.64
SNX1-214ENST00000625244 CFAP77Q6ZQR2 320 aa11.05□□□□□ -0.64
SNX1-214ENST00000625244 TSEN54Q7Z6J9 526 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms