RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 PIGTQ969N2 578 aa11.05□□□□□ -0.64
SPG7-209ENST00000564047 MRPL24Q96A35 216 aaKnown RBP11.05□□□□□ -0.64
SPG7-209ENST00000564047 CHST5Q9GZS9 411 aa11.05□□□□□ -0.64
SPG7-209ENST00000564047 SLITRK2Q9H156 845 aa11.05□□□□□ -0.64
SPG7-209ENST00000564047 ZCCHC4Q9H5U6 513 aa11.05□□□□□ -0.64
SPG7-209ENST00000564047 TCF7L1Q9HCS4 588 aa11.05□□□□□ -0.64
SPG7-209ENST00000564047 TAS2R4Q9NYW5 299 aa11.05□□□□□ -0.64
SPG7-209ENST00000564047 MRPL15Q9P015 296 aaKnown RBP11.05□□□□□ -0.64
SPG7-209ENST00000564047 TRAV8-7A0A075B6U6 113 aa11.04□□□□□ -0.64
SPG7-209ENST00000564047 ANKRD61A6NGH8 418 aa11.04□□□□□ -0.64
SPG7-209ENST00000564047 A6NIN4 97 aa11.04□□□□□ -0.64
SPG7-209ENST00000564047 ANKRD30BLA7E2S9 258 aa11.04□□□□□ -0.64
SPG7-209ENST00000564047 E7EQL1 145 aa11.04□□□□□ -0.64
SPG7-209ENST00000564047 ALX3O95076 343 aa11.04□□□□□ -0.64
SPG7-209ENST00000564047 SDC2P34741 201 aa11.04□□□□□ -0.64
SPG7-209ENST00000564047 KLF3P57682 345 aaPredicted RBP11.04□□□□□ -0.64
SPG7-209ENST00000564047 SELENOVP59797 346 aa11.04□□□□□ -0.64
SPG7-209ENST00000564047 PPP3R1P63098 170 aa11.04□□□□□ -0.64
SPG7-209ENST00000564047 HNRNPA0Q13151 305 aaKnown RBP11.04□□□□□ -0.64
SPG7-209ENST00000564047 ADIPOQQ15848 244 aa11.04□□□□□ -0.64
SPG7-209ENST00000564047 TMEM255AQ5JRV8 349 aa11.04□□□□□ -0.64
SPG7-209ENST00000564047 DDI2Q5TDH0 399 aa11.04□□□□□ -0.64
SPG7-209ENST00000564047 TPRA1Q86W33 373 aa11.04□□□□□ -0.64
SPG7-209ENST00000564047 SNX29P2Q8IUI4 249 aa11.04□□□□□ -0.64
SPG7-209ENST00000564047 POC5Q8NA72 575 aa11.04□□□□□ -0.64
SPG7-209ENST00000564047 OR1M1Q8NGA1 313 aa11.04□□□□□ -0.64
SPG7-209ENST00000564047 LILRB1Q8NHL6 650 aaPredicted RBP11.04□□□□□ -0.64
SPG7-209ENST00000564047 ORAI1Q96D31 301 aa11.04□□□□□ -0.64
SPG7-209ENST00000564047 TECTBQ96PL2 329 aa11.04□□□□□ -0.64
SPG7-209ENST00000564047 SDHCQ99643 169 aaPredicted RBP11.04□□□□□ -0.64
SPG7-209ENST00000564047 DUSP13Q9UII6 198 aa11.04□□□□□ -0.64
SPG7-209ENST00000564047 FZR1Q9UM11 496 aa11.04□□□□□ -0.64
SPG7-209ENST00000564047 RHBDD3Q9Y3P4 386 aa11.04□□□□□ -0.64
SPG7-209ENST00000564047 MPC1Q9Y5U8 109 aa11.04□□□□□ -0.64
SPG7-209ENST00000564047 V9GYH0 126 aa11.04□□□□□ -0.64
SPG7-209ENST00000564047 SHISA3A0PJX4 238 aa11.03□□□□□ -0.64
SPG7-209ENST00000564047 MEGF11A6BM72 1044 aa11.03□□□□□ -0.64
SPG7-209ENST00000564047 A6NNC1 897 aa11.03□□□□□ -0.64
SPG7-209ENST00000564047 PDCD5O14737 125 aa11.03□□□□□ -0.64
SPG7-209ENST00000564047 RGS5O15539 181 aa11.03□□□□□ -0.64
SPG7-209ENST00000564047 SULT1B1O43704 296 aa11.03□□□□□ -0.64
SPG7-209ENST00000564047 TIMM8AO60220 97 aaPredicted RBP11.03□□□□□ -0.64
SPG7-209ENST00000564047 GMDSO60547 372 aa11.03□□□□□ -0.64
SPG7-209ENST00000564047 PLAUP00749 431 aa11.03□□□□□ -0.64
SPG7-209ENST00000564047 NRASP01111 189 aa11.03□□□□□ -0.64
SPG7-209ENST00000564047 APOA1P02647 267 aa11.03□□□□□ -0.64
SPG7-209ENST00000564047 OR4A8P0C604 315 aa11.03□□□□□ -0.64
SPG7-209ENST00000564047 CLEC2LP0C7M8 214 aa11.03□□□□□ -0.64
SPG7-209ENST00000564047 ATF1P18846 271 aa11.03□□□□□ -0.64
SPG7-209ENST00000564047 RAB3AP20336 220 aa11.03□□□□□ -0.64
SPG7-209ENST00000564047 APOBEC3AP31941 199 aaPredicted RBP11.03□□□□□ -0.64
SPG7-209ENST00000564047 EVX1P49640 407 aa11.03□□□□□ -0.64
SPG7-209ENST00000564047 ALKBH6Q3KRA9 238 aa11.03□□□□□ -0.64
SPG7-209ENST00000564047 ZNF672Q499Z4 452 aaPredicted RBP11.03□□□□□ -0.64
SPG7-209ENST00000564047 MZT2AQ6P582 158 aa11.03□□□□□ -0.64
SPG7-209ENST00000564047 SPNS3Q6ZMD2 512 aa11.03□□□□□ -0.64
SPG7-209ENST00000564047 LRRTM1Q86UE6 522 aa11.03□□□□□ -0.64
SPG7-209ENST00000564047 LRP11Q86VZ4 500 aa11.03□□□□□ -0.64
SPG7-209ENST00000564047 OR5AS1Q8N127 324 aa11.03□□□□□ -0.64
SPG7-209ENST00000564047 GDPD1Q8N9F7 314 aa11.03□□□□□ -0.64
SPG7-209ENST00000564047 BHLHE23Q8NDY6 225 aa11.03□□□□□ -0.64
SPG7-209ENST00000564047 OR8G5Q8NG78 346 aa11.03□□□□□ -0.64
SPG7-209ENST00000564047 OR13C9Q8NGT0 318 aa11.03□□□□□ -0.64
SPG7-209ENST00000564047 UBASH3BQ8TF42 649 aa11.03□□□□□ -0.64
SPG7-209ENST00000564047 CHAC2Q8WUX2 184 aa11.03□□□□□ -0.64
SPG7-209ENST00000564047 ACOT12Q8WYK0 555 aa11.03□□□□□ -0.64
SPG7-209ENST00000564047 PIGCQ92535 297 aa11.03□□□□□ -0.64
SPG7-209ENST00000564047 DHRS9Q9BPW9 319 aa11.03□□□□□ -0.64
SPG7-209ENST00000564047 NEURL2Q9BR09 285 aa11.03□□□□□ -0.64
SPG7-209ENST00000564047 PAPOLGQ9BWT3 736 aaKnown RBP11.03□□□□□ -0.64
SPG7-209ENST00000564047 MRPL37Q9BZE1 423 aaKnown RBP11.03□□□□□ -0.64
SPG7-209ENST00000564047 SRRQ9GZT4 340 aa11.03□□□□□ -0.64
SPG7-209ENST00000564047 SLC22A4Q9H015 551 aa11.03□□□□□ -0.64
SPG7-209ENST00000564047 MIXL1Q9H2W2 232 aa11.03□□□□□ -0.64
SPG7-209ENST00000564047 NEK6Q9HC98 313 aa11.03□□□□□ -0.64
SPG7-209ENST00000564047 ABCB9Q9NP78 766 aa11.03□□□□□ -0.64
SPG7-209ENST00000564047 TMEM138Q9NPI0 162 aa11.03□□□□□ -0.64
SPG7-209ENST00000564047 CISD1Q9NZ45 108 aaKnown RBP11.03□□□□□ -0.64
SPG7-209ENST00000564047 CGGBP1Q9UFW8 167 aaPredicted RBP11.03□□□□□ -0.64
SPG7-209ENST00000564047 A0A1B0GWJ7 208 aa11.02□□□□□ -0.65
SPG7-209ENST00000564047 FAM221AA4D161 298 aa11.02□□□□□ -0.65
SPG7-209ENST00000564047 ZNF850A8MQ14 1090 aa11.02□□□□□ -0.65
SPG7-209ENST00000564047 LILRA1O75019 489 aa11.02□□□□□ -0.65
SPG7-209ENST00000564047 ALDOBP05062 364 aa11.02□□□□□ -0.65
SPG7-209ENST00000564047 ERCC1P07992 297 aaPredicted RBP11.02□□□□□ -0.65
SPG7-209ENST00000564047 BDKRB2P30411 391 aa11.02□□□□□ -0.65
SPG7-209ENST00000564047 SERPINF1P36955 418 aa11.02□□□□□ -0.65
SPG7-209ENST00000564047 PRDX4Q13162 271 aa11.02□□□□□ -0.65
SPG7-209ENST00000564047 CNN3Q15417 329 aaKnown RBP11.02□□□□□ -0.65
SPG7-209ENST00000564047 EFNB3Q15768 340 aa11.02□□□□□ -0.65
SPG7-209ENST00000564047 UBE2V2Q15819 145 aa11.02□□□□□ -0.65
SPG7-209ENST00000564047 MOB3CQ70IA8 216 aa11.02□□□□□ -0.65
SPG7-209ENST00000564047 LAX1Q8IWV1 398 aa11.02□□□□□ -0.65
SPG7-209ENST00000564047 ZDHHC23Q8IYP9 409 aa11.02□□□□□ -0.65
SPG7-209ENST00000564047 OR51A2Q8NGJ7 313 aa11.02□□□□□ -0.65
SPG7-209ENST00000564047 NEUROG1Q92886 237 aa11.02□□□□□ -0.65
SPG7-209ENST00000564047 SPSB1Q96BD6 273 aa11.02□□□□□ -0.65
SPG7-209ENST00000564047 KCTD12Q96CX2 325 aaKnown RBP11.02□□□□□ -0.65
SPG7-209ENST00000564047 SYT3Q9BQG1 590 aa11.02□□□□□ -0.65
SPG7-209ENST00000564047 PLK3Q9H4B4 646 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms