RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 GGNBP1Q5YKI7 109 aa17.33■□□□□ 0.36
SUDS3-204ENST00000543473 NPEPL1Q8NDH3 523 aa17.33■□□□□ 0.36
SUDS3-204ENST00000543473 OR11G2Q8NGC1 345 aa17.33■□□□□ 0.36
SUDS3-204ENST00000543473 CNTD2Q9H8S5 307 aa17.33■□□□□ 0.36
SUDS3-204ENST00000543473 TRIOBPQ9H2D6 2365 aa17.33■□□□□ 0.36
SUDS3-204ENST00000543473 C7orf77A4D0Y5 90 aa17.33■□□□□ 0.36
SUDS3-204ENST00000543473 HLA-DQB1P01920 261 aa17.33■□□□□ 0.36
SUDS3-204ENST00000543473 LHFPL2Q6ZUX7 228 aa17.33■□□□□ 0.36
SUDS3-204ENST00000543473 PRSS41Q7RTY9 318 aa17.33■□□□□ 0.36
SUDS3-204ENST00000543473 VN1R4Q7Z5H5 301 aa17.33■□□□□ 0.36
SUDS3-204ENST00000543473 UBE3DQ7Z6J8 389 aa17.33■□□□□ 0.36
SUDS3-204ENST00000543473 MOGAT1Q96PD6 335 aa17.33■□□□□ 0.36
SUDS3-204ENST00000543473 ACTR3CQ9C0K3 210 aaPredicted RBP17.33■□□□□ 0.36
SUDS3-204ENST00000543473 G3V3Q6 166 aa17.32■□□□□ 0.36
SUDS3-204ENST00000543473 FMODQ06828 376 aa17.32■□□□□ 0.36
SUDS3-204ENST00000543473 ATG2BQ96BY7 2078 aa17.32■□□□□ 0.36
SUDS3-204ENST00000543473 DSPPQ9NZW4 1301 aa17.32■□□□□ 0.36
SUDS3-204ENST00000543473 TRAV8-7A0A075B6U6 113 aa17.32■□□□□ 0.36
SUDS3-204ENST00000543473 DEGS1O15121 323 aa17.32■□□□□ 0.36
SUDS3-204ENST00000543473 ANGPTL7O43827 346 aa17.32■□□□□ 0.36
SUDS3-204ENST00000543473 MLF1P58340 268 aa17.32■□□□□ 0.36
SUDS3-204ENST00000543473 ZIC1Q15915 447 aa17.32■□□□□ 0.36
SUDS3-204ENST00000543473 TMIGD3P0DMS9 266 aaPredicted RBP17.32■□□□□ 0.36
SUDS3-204ENST00000543473 TBXA2RP21731 343 aa17.32■□□□□ 0.36
SUDS3-204ENST00000543473 DEGS2Q6QHC5 323 aa17.32■□□□□ 0.36
SUDS3-204ENST00000543473 BTNL8Q6UX41 500 aa17.32■□□□□ 0.36
SUDS3-204ENST00000543473 PP6455Q8WZ26 134 aa17.32■□□□□ 0.36
SUDS3-204ENST00000543473 RDH5Q92781 318 aa17.32■□□□□ 0.36
SUDS3-204ENST00000543473 ADAT1Q9BUB4 502 aaKnown RBP17.32■□□□□ 0.36
SUDS3-204ENST00000543473 FLRT3Q9NZU0 649 aa17.32■□□□□ 0.36
SUDS3-204ENST00000543473 LHX6Q9UPM6 363 aa17.32■□□□□ 0.36
SUDS3-204ENST00000543473 OR4C45A6NMZ5 311 aa17.32■□□□□ 0.36
SUDS3-204ENST00000543473 SEC14L6B5MCN3 397 aa17.32■□□□□ 0.36
SUDS3-204ENST00000543473 EDN3P14138 238 aa17.32■□□□□ 0.36
SUDS3-204ENST00000543473 RNF151Q2KHN1 245 aa17.32■□□□□ 0.36
SUDS3-204ENST00000543473 SYT13Q7L8C5 426 aa17.32■□□□□ 0.36
SUDS3-204ENST00000543473 TMEM37Q8WXS4 190 aa17.32■□□□□ 0.36
SUDS3-204ENST00000543473 OXGR1Q96P68 337 aa17.32■□□□□ 0.36
SUDS3-204ENST00000543473 OR2A5Q96R48 311 aa17.32■□□□□ 0.36
SUDS3-204ENST00000543473 ZNF586Q9NXT0 402 aa17.32■□□□□ 0.36
SUDS3-204ENST00000543473 BOKQ9UMX3 212 aaPredicted RBP17.32■□□□□ 0.36
SUDS3-204ENST00000543473 ZNF320A2RRD8 509 aa17.31■□□□□ 0.36
SUDS3-204ENST00000543473 LIMS1P48059 325 aa17.31■□□□□ 0.36
SUDS3-204ENST00000543473 FOXK1P85037 733 aa17.31■□□□□ 0.36
SUDS3-204ENST00000543473 DHODHQ02127 395 aa17.31■□□□□ 0.36
SUDS3-204ENST00000543473 FAM210BQ96KR6 192 aa17.31■□□□□ 0.36
SUDS3-204ENST00000543473 ST6GALNAC2Q9UJ37 374 aa17.31■□□□□ 0.36
SUDS3-204ENST00000543473 MFSD2BA6NFX1 497 aa17.31■□□□□ 0.36
SUDS3-204ENST00000543473 FAM74A7A6NL05 159 aa17.31■□□□□ 0.36
SUDS3-204ENST00000543473 FAM74A3Q4VXF1 159 aa17.31■□□□□ 0.36
SUDS3-204ENST00000543473 DCAF12Q5T6F0 453 aa17.31■□□□□ 0.36
SUDS3-204ENST00000543473 ZNF574Q6ZN55 896 aaPredicted RBP17.31■□□□□ 0.36
SUDS3-204ENST00000543473 H2BFWTQ7Z2G1 175 aa17.31■□□□□ 0.36
SUDS3-204ENST00000543473 SLC25A42Q86VD7 318 aa17.31■□□□□ 0.36
SUDS3-204ENST00000543473 OR10P1Q8NGE3 313 aa17.31■□□□□ 0.36
SUDS3-204ENST00000543473 NTNG2Q96CW9 530 aa17.31■□□□□ 0.36
SUDS3-204ENST00000543473 NMES1Q9C002 83 aa17.31■□□□□ 0.36
SUDS3-204ENST00000543473 PSENENQ9NZ42 101 aa17.31■□□□□ 0.36
SUDS3-204ENST00000543473 GABRA2P47869 451 aa17.31■□□□□ 0.36
SUDS3-204ENST00000543473 ZNF660Q6AZW8 331 aaPredicted RBP17.31■□□□□ 0.36
SUDS3-204ENST00000543473 SLC39A7Q92504 469 aa17.31■□□□□ 0.36
SUDS3-204ENST00000543473 INTS12Q96CB8 462 aaKnown RBP17.31■□□□□ 0.36
SUDS3-204ENST00000543473 PPP1R3CQ9UQK1 317 aa17.31■□□□□ 0.36
SUDS3-204ENST00000543473 APOA2P02652 100 aa17.31■□□□□ 0.36
SUDS3-204ENST00000543473 CD63P08962 238 aa17.31■□□□□ 0.36
SUDS3-204ENST00000543473 CDAP32320 146 aa17.31■□□□□ 0.36
SUDS3-204ENST00000543473 COL13A1Q5TAT6 717 aaPredicted RBP17.31■□□□□ 0.36
SUDS3-204ENST00000543473 DCAF12L2Q5VW00 463 aa17.31■□□□□ 0.36
SUDS3-204ENST00000543473 OR2AE1Q8NHA4 323 aa17.31■□□□□ 0.36
SUDS3-204ENST00000543473 TNFSF18Q9UNG2 199 aa17.31■□□□□ 0.36
SUDS3-204ENST00000543473 TMED3Q9Y3Q3 217 aa17.31■□□□□ 0.36
SUDS3-204ENST00000543473 SIGLEC5O15389 551 aa17.3■□□□□ 0.36
SUDS3-204ENST00000543473 RAB5AP20339 215 aa17.3■□□□□ 0.36
SUDS3-204ENST00000543473 SIGLEC14Q08ET2 396 aa17.3■□□□□ 0.36
SUDS3-204ENST00000543473 ZNF345Q14585 488 aa17.3■□□□□ 0.36
SUDS3-204ENST00000543473 NKAIN1Q4KMZ8 207 aa17.3■□□□□ 0.36
SUDS3-204ENST00000543473 FAM234AQ9H0X4 552 aa17.3■□□□□ 0.36
SUDS3-204ENST00000543473 CALHM2Q9HA72 323 aa17.3■□□□□ 0.36
SUDS3-204ENST00000543473 SF3B6Q9Y3B4 125 aaKnown RBP17.3■□□□□ 0.36
SUDS3-204ENST00000543473 CLEC18BQ6UXF7 455 aa17.3■□□□□ 0.36
SUDS3-204ENST00000543473 TMEM104Q8NE00 496 aa17.3■□□□□ 0.36
SUDS3-204ENST00000543473 OR10AC1Q8NH08 325 aa17.3■□□□□ 0.36
SUDS3-204ENST00000543473 F12P00748 615 aaPredicted RBP17.3■□□□□ 0.36
SUDS3-204ENST00000543473 CT62P0C5K7 136 aa17.3■□□□□ 0.36
SUDS3-204ENST00000543473 OR8U8P0C7N1 319 aa17.3■□□□□ 0.36
SUDS3-204ENST00000543473 VSIG10L2P0DP72 767 aa17.3■□□□□ 0.36
SUDS3-204ENST00000543473 CTLA4P16410 223 aa17.3■□□□□ 0.36
SUDS3-204ENST00000543473 COX5AP20674 150 aa17.3■□□□□ 0.36
SUDS3-204ENST00000543473 KISS1Q15726 138 aa17.3■□□□□ 0.36
SUDS3-204ENST00000543473 RGS7BPQ6MZT1 257 aaPredicted RBP17.3■□□□□ 0.36
SUDS3-204ENST00000543473 SLC25A26Q70HW3 274 aa17.3■□□□□ 0.36
SUDS3-204ENST00000543473 OSR2Q8N2R0 312 aa17.3■□□□□ 0.36
SUDS3-204ENST00000543473 ALX4Q9H161 411 aaPredicted RBP17.3■□□□□ 0.36
SUDS3-204ENST00000543473 AMDHD2Q9Y303 409 aa17.3■□□□□ 0.36
SUDS3-204ENST00000543473 ZNFX1Q9P2E3 1918 aaKnown RBP17.3■□□□□ 0.36
SUDS3-204ENST00000543473 EPPINO95925 133 aa17.3■□□□□ 0.36
SUDS3-204ENST00000543473 ONECUT2O95948 504 aa17.3■□□□□ 0.36
SUDS3-204ENST00000543473 IGHV3-9P01782 118 aa17.3■□□□□ 0.36
SUDS3-204ENST00000543473 THBS4P35443 961 aa17.3■□□□□ 0.36
SUDS3-204ENST00000543473 AGFG1P52594 562 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms