RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 P01737 135 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 IGHV3-13P01766 116 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 ORM1P02763 201 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 GNAO1P09471 354 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 CHTF8P0CG12 524 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 CD1EP15812 388 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 CDKN2CP42773 168 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 P2RX1P51575 399 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 CEBPGP53567 150 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 TAS2R31P59538 309 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 TIMM10P62072 90 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 SMARCB1Q12824 385 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 GPNMBQ14956 572 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 PON3Q15166 354 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 SGCAQ16586 387 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 MRGPRG-AS1Q2M3A8 158 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 PAMR1Q6UXH9 720 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 ZNF493Q6ZR52 646 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 RNF165Q6ZSG1 346 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 RFLNAQ6ZTI6 216 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 FAM19A1Q7Z5A9 133 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 SLC34A3Q8N130 599 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 UBAC2Q8NBM4 344 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 OR4K17Q8NGC6 315 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 OR11H7Q8NGC8 314 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 OR4K2Q8NGD2 314 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 OR2L2Q8NH16 312 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 OR6X1Q8NH79 312 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 OR2AE1Q8NHA4 323 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 RHOXF1Q8NHV9 184 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 ZNF461Q8TAF7 563 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 DYNC2LI1Q8TCX1 351 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 GTSF1Q8WW33 167 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 RGP1Q92546 391 aaPredicted RBP3.14□□□□□ -1.91
VPS13D-207ENST00000476169 CDS1Q92903 461 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 CPNE4Q96A23 557 aaPredicted RBP3.14□□□□□ -1.91
VPS13D-207ENST00000476169 PPWD1Q96BP3 646 aaKnown RBP3.14□□□□□ -1.91
VPS13D-207ENST00000476169 RASL11BQ9BPW5 248 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 SOSTQ9BQB4 213 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 YTHDF1Q9BYJ9 559 aaKnown RBP3.14□□□□□ -1.91
VPS13D-207ENST00000476169 API5Q9BZZ5 524 aaKnown RBP3.14□□□□□ -1.91
VPS13D-207ENST00000476169 OR51B5Q9H339 312 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 GNB4Q9HAV0 340 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 TMEM100Q9NV29 134 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 PLEKHJ1Q9NW61 149 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 ZNF581Q9P0T4 197 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 C3orf18Q9UK00 162 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 MOKQ9UQ07 419 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 CFAP65Q6ZU64 1925 aaKnown RBP3.14□□□□□ -1.91
VPS13D-207ENST00000476169 STRCP1A6NGW2 1772 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 PXDNQ92626 1479 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 GCC2Q8IWJ2 1684 aa3.14□□□□□ -1.91
VPS13D-207ENST00000476169 ROCK2O75116 1388 aaKnown RBP3.13□□□□□ -1.91
VPS13D-207ENST00000476169 TONSLQ96HA7 1378 aa3.13□□□□□ -1.91
VPS13D-207ENST00000476169 DIP2AQ14689 1571 aa3.13□□□□□ -1.91
VPS13D-207ENST00000476169 MED1Q15648 1581 aaPredicted RBP3.13□□□□□ -1.91
VPS13D-207ENST00000476169 A0A1B0GX12 115 aa3.13□□□□□ -1.91
VPS13D-207ENST00000476169 C9J4A7 227 aa3.13□□□□□ -1.91
VPS13D-207ENST00000476169 TNFRSF11BO00300 401 aa3.13□□□□□ -1.91
VPS13D-207ENST00000476169 CDIPTO14735 213 aa3.13□□□□□ -1.91
VPS13D-207ENST00000476169 HDAC3O15379 428 aa3.13□□□□□ -1.91
VPS13D-207ENST00000476169 TRAPPC3O43617 180 aa3.13□□□□□ -1.91
VPS13D-207ENST00000476169 IGHV3-23P01764 117 aa3.13□□□□□ -1.91
VPS13D-207ENST00000476169 LIMS3P0CW19 117 aa3.13□□□□□ -1.91
VPS13D-207ENST00000476169 LIMS4P0CW20 117 aa3.13□□□□□ -1.91
VPS13D-207ENST00000476169 IGHV3-43DP0DP04 118 aa3.13□□□□□ -1.91
VPS13D-207ENST00000476169 PSMB1P20618 241 aaKnown RBP3.13□□□□□ -1.91
VPS13D-207ENST00000476169 MT3P25713 68 aa3.13□□□□□ -1.91
VPS13D-207ENST00000476169 COILP38432 576 aaPredicted RBP3.13□□□□□ -1.91
VPS13D-207ENST00000476169 MYCNOSP40205 109 aa3.13□□□□□ -1.91
VPS13D-207ENST00000476169 ACTR1BP42025 376 aa3.13□□□□□ -1.91
VPS13D-207ENST00000476169 NDUFA8P51970 172 aa3.13□□□□□ -1.91
VPS13D-207ENST00000476169 MTPNP58546 118 aa3.13□□□□□ -1.91
VPS13D-207ENST00000476169 RAB8AP61006 207 aa3.13□□□□□ -1.91
VPS13D-207ENST00000476169 MAGOHP61326 146 aaKnown RBP3.13□□□□□ -1.91
VPS13D-207ENST00000476169 CD164Q04900 197 aa3.13□□□□□ -1.91
VPS13D-207ENST00000476169 PSG5Q15238 335 aa3.13□□□□□ -1.91
VPS13D-207ENST00000476169 OR1Q1Q15612 314 aa3.13□□□□□ -1.91
VPS13D-207ENST00000476169 TIMM23BQ5SRD1 257 aa3.13□□□□□ -1.91
VPS13D-207ENST00000476169 NIPAL1Q6NVV3 410 aa3.13□□□□□ -1.91
VPS13D-207ENST00000476169 ZNF343Q6P1L6 599 aa3.13□□□□□ -1.91
VPS13D-207ENST00000476169 USP50Q70EL3 339 aaPredicted RBP3.13□□□□□ -1.91
VPS13D-207ENST00000476169 H2AFVQ71UI9 128 aa3.13□□□□□ -1.91
VPS13D-207ENST00000476169 STRADAQ7RTN6 431 aa3.13□□□□□ -1.91
VPS13D-207ENST00000476169 ZNF440Q8IYI8 595 aa3.13□□□□□ -1.91
VPS13D-207ENST00000476169 CYP4Z2PQ8N1L4 340 aa3.13□□□□□ -1.91
VPS13D-207ENST00000476169 NPWQ8N729 165 aa3.13□□□□□ -1.91
VPS13D-207ENST00000476169 NT5CQ8TCD5 201 aa3.13□□□□□ -1.91
VPS13D-207ENST00000476169 ZFAND1Q8TCF1 268 aa3.13□□□□□ -1.91
VPS13D-207ENST00000476169 NTAN1Q96AB6 310 aa3.13□□□□□ -1.91
VPS13D-207ENST00000476169 TMEM159Q96B96 161 aa3.13□□□□□ -1.91
VPS13D-207ENST00000476169 HAUS1Q96CS2 278 aa3.13□□□□□ -1.91
VPS13D-207ENST00000476169 WDR34Q96EX3 536 aa3.13□□□□□ -1.91
VPS13D-207ENST00000476169 AURKBQ96GD4 344 aaPredicted RBP3.13□□□□□ -1.91
VPS13D-207ENST00000476169 RDH12Q96NR8 316 aa3.13□□□□□ -1.91
VPS13D-207ENST00000476169 KRTAP1-5Q9BYS1 174 aa3.13□□□□□ -1.91
VPS13D-207ENST00000476169 PRORYQ9H606 182 aa3.13□□□□□ -1.91
VPS13D-207ENST00000476169 ABCB9Q9NP78 766 aa3.13□□□□□ -1.91
VPS13D-207ENST00000476169 ZDHHC4Q9NPG8 344 aa3.13□□□□□ -1.91
VPS13D-207ENST00000476169 MED4Q9NPJ6 270 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 166.4 ms