RNA–Protein interactions for RNA: ENST00000469003.5

CCDC28B-204, Transcript of coiled-coil domain containing 28B, humanhuman

TSL 2

Gene CCDC28B, Length 1,235 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-204ENST00000469003 FLOT2Q14254 428 aa13.63□□□□□ -0.23
CCDC28B-204ENST00000469003 DNAL1Q4LDG9 190 aa13.63□□□□□ -0.23
CCDC28B-204ENST00000469003 TMEM236Q5W0B7 351 aa13.63□□□□□ -0.23
CCDC28B-204ENST00000469003 KCTD18Q6PI47 426 aaPredicted RBP13.63□□□□□ -0.23
CCDC28B-204ENST00000469003 DEGS2Q6QHC5 323 aa13.63□□□□□ -0.23
CCDC28B-204ENST00000469003 ZNF788Q6ZQV5 615 aa13.63□□□□□ -0.23
CCDC28B-204ENST00000469003 C17orf107Q6ZR85 190 aa13.63□□□□□ -0.23
CCDC28B-204ENST00000469003 SPATA24Q86W54 205 aa13.63□□□□□ -0.23
CCDC28B-204ENST00000469003 ANGPTL6Q8NI99 470 aa13.63□□□□□ -0.23
CCDC28B-204ENST00000469003 FAM81AQ8TBF8 368 aa13.63□□□□□ -0.23
CCDC28B-204ENST00000469003 NPRL2Q8WTW4 380 aa13.63□□□□□ -0.23
CCDC28B-204ENST00000469003 ITFG2Q969R8 447 aa13.63□□□□□ -0.23
CCDC28B-204ENST00000469003 MED30Q96HR3 178 aa13.63□□□□□ -0.23
CCDC28B-204ENST00000469003 HIST1H2AAQ96QV6 131 aa13.63□□□□□ -0.23
CCDC28B-204ENST00000469003 FAM206AQ9NX38 181 aa13.63□□□□□ -0.23
CCDC28B-204ENST00000469003 A0A0U1RQV5 110 aa13.62□□□□□ -0.23
CCDC28B-204ENST00000469003 ZNF816-ZNF321PA0A0X1KG74 233 aa13.62□□□□□ -0.23
CCDC28B-204ENST00000469003 TCRBV3S1A0A5B6 114 aa13.62□□□□□ -0.23
CCDC28B-204ENST00000469003 AKR7A2O43488 359 aa13.62□□□□□ -0.23
CCDC28B-204ENST00000469003 GPR137BO60478 399 aa13.62□□□□□ -0.23
CCDC28B-204ENST00000469003 SELLP14151 372 aa13.62□□□□□ -0.23
CCDC28B-204ENST00000469003 HCCSP53701 268 aa13.62□□□□□ -0.23
CCDC28B-204ENST00000469003 GUCA2AQ02747 115 aa13.62□□□□□ -0.23
CCDC28B-204ENST00000469003 SNAPC1Q16533 368 aa13.62□□□□□ -0.23
CCDC28B-204ENST00000469003 PAPD5Q8NDF8 572 aaKnown RBP13.62□□□□□ -0.23
CCDC28B-204ENST00000469003 DNAJC9Q8WXX5 260 aa13.62□□□□□ -0.23
CCDC28B-204ENST00000469003 H1FXQ92522 213 aaKnown RBP13.62□□□□□ -0.23
CCDC28B-204ENST00000469003 GAFA1Q96PS6 74 aa13.62□□□□□ -0.23
CCDC28B-204ENST00000469003 TEAD3Q99594 435 aa13.62□□□□□ -0.23
CCDC28B-204ENST00000469003 DPAGT1Q9H3H5 408 aa13.62□□□□□ -0.23
CCDC28B-204ENST00000469003 SIRT7Q9NRC8 400 aa13.62□□□□□ -0.23
CCDC28B-204ENST00000469003 TVP23BQ9NYZ1 205 aa13.62□□□□□ -0.23
CCDC28B-204ENST00000469003 CAB39Q9Y376 341 aaPredicted RBP13.62□□□□□ -0.23
CCDC28B-204ENST00000469003 FAM96BQ9Y3D0 163 aa13.62□□□□□ -0.23
CCDC28B-204ENST00000469003 TMEM269A0A1B0GVZ9 245 aa13.61□□□□□ -0.23
CCDC28B-204ENST00000469003 CCDC182A6NF36 153 aa13.61□□□□□ -0.23
CCDC28B-204ENST00000469003 SIGLEC5O15389 551 aa13.61□□□□□ -0.23
CCDC28B-204ENST00000469003 GYG2O15488 501 aa13.61□□□□□ -0.23
CCDC28B-204ENST00000469003 ATP6V1B1P15313 513 aa13.61□□□□□ -0.23
CCDC28B-204ENST00000469003 GPM6AP51674 278 aa13.61□□□□□ -0.23
CCDC28B-204ENST00000469003 CRISP1P54107 249 aa13.61□□□□□ -0.23
CCDC28B-204ENST00000469003 GNG3P63215 75 aa13.61□□□□□ -0.23
CCDC28B-204ENST00000469003 SRSF4Q08170 494 aaKnown RBP13.61□□□□□ -0.23
CCDC28B-204ENST00000469003 DGUOKQ16854 277 aa13.61□□□□□ -0.23
CCDC28B-204ENST00000469003 CEACAM21Q3KPI0 293 aa13.61□□□□□ -0.23
CCDC28B-204ENST00000469003 LCN1P1Q5VSP4 162 aa13.61□□□□□ -0.23
CCDC28B-204ENST00000469003 TRPM8Q7Z2W7 1104 aa13.61□□□□□ -0.23
CCDC28B-204ENST00000469003 Q8N7P7 452 aa13.61□□□□□ -0.23
CCDC28B-204ENST00000469003 NRBF2Q96F24 287 aa13.61□□□□□ -0.23
CCDC28B-204ENST00000469003 MROQ9BYG7 248 aa13.61□□□□□ -0.23
CCDC28B-204ENST00000469003 OR51I2Q9H344 312 aa13.61□□□□□ -0.23
CCDC28B-204ENST00000469003 PAPOLBQ9NRJ5 636 aaKnown RBP13.61□□□□□ -0.23
CCDC28B-204ENST00000469003 NLKQ9UBE8 527 aa13.61□□□□□ -0.23
CCDC28B-204ENST00000469003 SLC25A10Q9UBX3 287 aaPredicted RBP13.61□□□□□ -0.23
CCDC28B-204ENST00000469003 A0A0G2JK05 382 aa13.6□□□□□ -0.23
CCDC28B-204ENST00000469003 OR2AT4A6NND4 320 aa13.6□□□□□ -0.23
CCDC28B-204ENST00000469003 ZNF732B4DXR9 585 aa13.6□□□□□ -0.23
CCDC28B-204ENST00000469003 RNASEK-C17orf49H0YIS7 233 aa13.6□□□□□ -0.23
CCDC28B-204ENST00000469003 PSMD9O00233 223 aa13.6□□□□□ -0.23
CCDC28B-204ENST00000469003 ZNF254O75437 659 aa13.6□□□□□ -0.23
CCDC28B-204ENST00000469003 TFF1P04155 84 aa13.6□□□□□ -0.23
CCDC28B-204ENST00000469003 MRPL3P09001 348 aaKnown RBP13.6□□□□□ -0.23
CCDC28B-204ENST00000469003 ACAA1P09110 424 aaPredicted RBP13.6□□□□□ -0.23
CCDC28B-204ENST00000469003 FBP1P09467 338 aa13.6□□□□□ -0.23
CCDC28B-204ENST00000469003 GLRA1P23415 457 aa13.6□□□□□ -0.23
CCDC28B-204ENST00000469003 EEF1B2P24534 225 aaKnown RBP13.6□□□□□ -0.23
CCDC28B-204ENST00000469003 CAV3P56539 151 aa13.6□□□□□ -0.23
CCDC28B-204ENST00000469003 ROM1Q03395 351 aa13.6□□□□□ -0.23
CCDC28B-204ENST00000469003 ZBTB37Q5TC79 503 aa13.6□□□□□ -0.23
CCDC28B-204ENST00000469003 BRICD5Q6PL45 260 aa13.6□□□□□ -0.23
CCDC28B-204ENST00000469003 GDPGP1Q6ZNW5 385 aa13.6□□□□□ -0.23
CCDC28B-204ENST00000469003 C1orf122Q6ZSJ8 110 aa13.6□□□□□ -0.23
CCDC28B-204ENST00000469003 ZNF679Q8IYX0 411 aa13.6□□□□□ -0.23
CCDC28B-204ENST00000469003 ASB17Q8WXJ9 295 aa13.6□□□□□ -0.23
CCDC28B-204ENST00000469003 LRTOMTQ8WZ04 291 aa13.6□□□□□ -0.23
CCDC28B-204ENST00000469003 TNFRSF14Q92956 283 aa13.6□□□□□ -0.23
CCDC28B-204ENST00000469003 CITED1Q99966 193 aa13.6□□□□□ -0.23
CCDC28B-204ENST00000469003 PBOV1Q9GZY1 135 aa13.6□□□□□ -0.23
CCDC28B-204ENST00000469003 ZNRD1Q9P1U0 126 aa13.6□□□□□ -0.23
CCDC28B-204ENST00000469003 POMPQ9Y244 141 aa13.6□□□□□ -0.23
CCDC28B-204ENST00000469003 TMEM14AQ9Y6G1 99 aa13.6□□□□□ -0.23
CCDC28B-204ENST00000469003 OR5B21A6NL26 309 aa13.59□□□□□ -0.23
CCDC28B-204ENST00000469003 M0R1W7 72 aa13.59□□□□□ -0.23
CCDC28B-204ENST00000469003 NPFFO15130 113 aa13.59□□□□□ -0.23
CCDC28B-204ENST00000469003 RHBDL1O75783 438 aa13.59□□□□□ -0.23
CCDC28B-204ENST00000469003 IGLV3-1P01715 115 aa13.59□□□□□ -0.23
CCDC28B-204ENST00000469003 NDUFB7P17568 137 aa13.59□□□□□ -0.23
CCDC28B-204ENST00000469003 DAPP51397 102 aa13.59□□□□□ -0.23
CCDC28B-204ENST00000469003 RIPPLY1Q0D2K3 151 aa13.59□□□□□ -0.23
CCDC28B-204ENST00000469003 OCLNQ16625 522 aa13.59□□□□□ -0.23
CCDC28B-204ENST00000469003 ZNF829Q3KNS6 432 aaPredicted RBP13.59□□□□□ -0.23
CCDC28B-204ENST00000469003 CEP78Q5JTW2 689 aa13.59□□□□□ -0.23
CCDC28B-204ENST00000469003 FAHD1Q6P587 224 aa13.59□□□□□ -0.23
CCDC28B-204ENST00000469003 THAP5Q7Z6K1 395 aa13.59□□□□□ -0.23
CCDC28B-204ENST00000469003 COMMD2Q86X83 199 aa13.59□□□□□ -0.23
CCDC28B-204ENST00000469003 OR5A2Q8NGI9 324 aa13.59□□□□□ -0.23
CCDC28B-204ENST00000469003 LINC01006Q8NI28 216 aa13.59□□□□□ -0.23
CCDC28B-204ENST00000469003 ZNF671Q8TAW3 534 aa13.59□□□□□ -0.23
CCDC28B-204ENST00000469003 OR51E1Q8TCB6 317 aa13.59□□□□□ -0.23
CCDC28B-204ENST00000469003 SLC7A6OSQ96CW6 309 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms