RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 POM121L12Q8N7R1 296 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 PRELID2Q8N945 189 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 HSD17B11Q8NBQ5 300 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 OR10G3Q8NGC4 313 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 TEX47Q8TBZ9 253 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 RNF133Q8WVZ7 376 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 CHCHD10Q8WYQ3 142 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 EEF1AKMT3Q96AZ1 226 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 PPP1R36Q96LQ0 422 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 DHX35Q9H5Z1 703 aaKnown RBP2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 WDR55Q9H6Y2 383 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 WDR54Q9H977 334 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 SIAEQ9HAT2 523 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 KCNJ16Q9NPI9 418 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 SPANXB1Q9NS25 103 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 AIG1Q9NVV5 245 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 CALYQ9NYX4 217 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 GNPTGQ9UJJ9 305 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 STOML2Q9UJZ1 356 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 CLEC4EQ9ULY5 219 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 CFL2Q9Y281 166 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 ASF1AQ9Y294 204 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 PLXNA3P51805 1871 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 NYNRINQ9P2P1 1898 aaKnown RBP2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 NFASCO94856 1347 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 THSD7BQ9C0I4 1608 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 ATG2AQ2TAZ0 1938 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 ANAPC1Q9H1A4 1944 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 CEP350Q5VT06 3117 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 OBSL1O75147 1896 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 DENND4CQ5VZ89 1909 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 IGKV3D-15A0A087WSY6 115 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 KIR2DL5BA0A0G2JN68 375 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 KIR2DL5BA0A0G2JPC4 375 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 ZNF816-ZNF321PA0A0X1KG74 233 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 A0A1B0GW55 424 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 TSPAN11A1L157 253 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 GJE1A6NN92 205 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 hCG_2039718K7EN88 272 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 SSNA1O43805 119 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 STX10O60499 249 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 ADAP1O75689 374 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 EIF3GO75821 320 aaKnown RBP eCLIP2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 ZMPSTE24O75844 475 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 SEMA3DO95025 777 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 RCBTB2O95199 551 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 SLC25A27O95847 323 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 IL6P05231 212 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 GIPP09681 153 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 DUX4L2P0CJ85 424 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 DUX4L3P0CJ86 424 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 DUX4L4P0CJ87 422 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 DUX4L5P0CJ88 424 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 DUX4L6P0CJ89 424 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 DUX4L7P0CJ90 424 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 SLC35E2BP0CK96 405 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 COX7A1P24310 79 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 HLA-DMAP28067 261 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 TEAD1P28347 426 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 ARL2P36404 184 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 RFC3P40938 356 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 MAGEA6P43360 314 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 CBX5P45973 191 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 GPR6P46095 362 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 SLCO1A2P46721 670 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 TGM4P49221 684 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 PSMD7P51665 324 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 OR2B8PP59922 312 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 KRTAP10-6P60371 365 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 RPS15AP62244 130 aaKnown RBP2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 GTF2BQ00403 316 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 CLINT1Q14677 625 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 TRIP13Q15645 432 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 PRR4Q16378 134 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 RPEL1Q2QD12 228 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 PGGHGQ32M88 737 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 COX19Q49B96 90 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 DUX4L9Q6RFH8 374 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 MBOAT1Q6ZNC8 495 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 TMEM179BQ7Z7N9 219 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 THOC6Q86W42 341 aaKnown RBP2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 ZNF677Q86XU0 584 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 PGAM4Q8N0Y7 254 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 KIR2DL5AQ8N109 375 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 C6orf223Q8N319 242 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 TMEM251Q8N6I4 163 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 LFNGQ8NES3 379 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 OR2AP1Q8NGE2 309 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 OR56A4Q8NGH8 313 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 KIR2DL5BQ8NHK3 375 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 SPATA3Q8NHX4 192 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 DYDC1Q8WWB3 177 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 CDS1Q92903 461 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 PPWD1Q96BP3 646 aaKnown RBP2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 HAUS1Q96CS2 278 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 VSIG2Q96IQ7 327 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 RILPQ96NA2 401 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 SIGLEC12Q96PQ1 595 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 ZNF184Q99676 751 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 KIR2DL4Q99706 377 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms