RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 METAP1DQ6UB28 335 aaPredicted RBP17.3■□□□□ 0.36
VSX1-206ENST00000444511 SPATA24Q86W54 205 aa17.3■□□□□ 0.36
VSX1-206ENST00000444511 PAPD5Q8NDF8 572 aaKnown RBP17.3■□□□□ 0.36
VSX1-206ENST00000444511 NPRL2Q8WTW4 380 aa17.3■□□□□ 0.36
VSX1-206ENST00000444511 HPSE2Q8WWQ2 592 aa17.3■□□□□ 0.36
VSX1-206ENST00000444511 LRTOMTQ8WZ04 291 aa17.3■□□□□ 0.36
VSX1-206ENST00000444511 FGF23Q9GZV9 251 aaPredicted RBP17.3■□□□□ 0.36
VSX1-206ENST00000444511 SLC25A10Q9UBX3 287 aaPredicted RBP17.3■□□□□ 0.36
VSX1-206ENST00000444511 ZNF816-ZNF321PA0A0X1KG74 233 aa17.29■□□□□ 0.36
VSX1-206ENST00000444511 SLC2A5P22732 501 aa17.29■□□□□ 0.36
VSX1-206ENST00000444511 MAP2K3P46734 347 aa17.29■□□□□ 0.36
VSX1-206ENST00000444511 GPM6AP51674 278 aa17.29■□□□□ 0.36
VSX1-206ENST00000444511 HCCSP53701 268 aa17.29■□□□□ 0.36
VSX1-206ENST00000444511 CBX1P83916 185 aa17.29■□□□□ 0.36
VSX1-206ENST00000444511 FLOT2Q14254 428 aa17.29■□□□□ 0.36
VSX1-206ENST00000444511 KCTD18Q6PI47 426 aaPredicted RBP17.29■□□□□ 0.36
VSX1-206ENST00000444511 ZNF788Q6ZQV5 615 aa17.29■□□□□ 0.36
VSX1-206ENST00000444511 COMMD2Q86X83 199 aa17.29■□□□□ 0.36
VSX1-206ENST00000444511 C8orf46Q8TAG6 207 aa17.29■□□□□ 0.36
VSX1-206ENST00000444511 GAFA1Q96PS6 74 aa17.29■□□□□ 0.36
VSX1-206ENST00000444511 YIPF3Q9GZM5 350 aa17.29■□□□□ 0.36
VSX1-206ENST00000444511 SEMA6AQ9H2E6 1030 aa17.29■□□□□ 0.36
VSX1-206ENST00000444511 SLC25A19Q9HC21 320 aa17.29■□□□□ 0.36
VSX1-206ENST00000444511 NLKQ9UBE8 527 aa17.29■□□□□ 0.36
VSX1-206ENST00000444511 DNAJB9Q9UBS3 223 aa17.29■□□□□ 0.36
VSX1-206ENST00000444511 RNF114Q9Y508 228 aa17.29■□□□□ 0.36
VSX1-206ENST00000444511 BTBD17A6NE02 478 aa17.28■□□□□ 0.36
VSX1-206ENST00000444511 ACOD1A6NK06 481 aa17.28■□□□□ 0.36
VSX1-206ENST00000444511 TFF1P04155 84 aa17.28■□□□□ 0.36
VSX1-206ENST00000444511 NDUFB7P17568 137 aa17.28■□□□□ 0.36
VSX1-206ENST00000444511 GLRA1P23415 457 aa17.28■□□□□ 0.36
VSX1-206ENST00000444511 DCTDP32321 178 aa17.28■□□□□ 0.36
VSX1-206ENST00000444511 PRB3Q04118 309 aaPredicted RBP17.28■□□□□ 0.36
VSX1-206ENST00000444511 SNAPC1Q16533 368 aa17.28■□□□□ 0.36
VSX1-206ENST00000444511 DGUOKQ16854 277 aa17.28■□□□□ 0.36
VSX1-206ENST00000444511 GDPGP1Q6ZNW5 385 aa17.28■□□□□ 0.36
VSX1-206ENST00000444511 Q8N7P7 452 aa17.28■□□□□ 0.36
VSX1-206ENST00000444511 ANGPTL6Q8NI99 470 aa17.28■□□□□ 0.36
VSX1-206ENST00000444511 CITED1Q99966 193 aa17.28■□□□□ 0.36
VSX1-206ENST00000444511 MROQ9BYG7 248 aa17.28■□□□□ 0.36
VSX1-206ENST00000444511 TVP23BQ9NYZ1 205 aa17.28■□□□□ 0.36
VSX1-206ENST00000444511 A0A0U1RQV5 110 aa17.27■□□□□ 0.36
VSX1-206ENST00000444511 TMEM269A0A1B0GVZ9 245 aa17.27■□□□□ 0.36
VSX1-206ENST00000444511 A0A1W2PQ09 198 aa17.27■□□□□ 0.36
VSX1-206ENST00000444511 A0A1W2PRD5 423 aa17.27■□□□□ 0.36
VSX1-206ENST00000444511 A0A1W2PRF3 423 aa17.27■□□□□ 0.36
VSX1-206ENST00000444511 A0A1W2PRM7 423 aa17.27■□□□□ 0.36
VSX1-206ENST00000444511 OR2AT4A6NND4 320 aa17.27■□□□□ 0.36
VSX1-206ENST00000444511 ZNF732B4DXR9 585 aa17.27■□□□□ 0.36
VSX1-206ENST00000444511 RNASEK-C17orf49H0YIS7 233 aa17.27■□□□□ 0.36
VSX1-206ENST00000444511 PSMD9O00233 223 aa17.27■□□□□ 0.36
VSX1-206ENST00000444511 NPFFO15130 113 aa17.27■□□□□ 0.36
VSX1-206ENST00000444511 SIGLEC5O15389 551 aa17.27■□□□□ 0.36
VSX1-206ENST00000444511 GYG2O15488 501 aa17.27■□□□□ 0.36
VSX1-206ENST00000444511 FKBP6O75344 327 aa17.27■□□□□ 0.36
VSX1-206ENST00000444511 MRPL3P09001 348 aaKnown RBP17.27■□□□□ 0.36
VSX1-206ENST00000444511 GABRA2P47869 451 aa17.27■□□□□ 0.36
VSX1-206ENST00000444511 GNG3P63215 75 aa17.27■□□□□ 0.36
VSX1-206ENST00000444511 DNAL1Q4LDG9 190 aa17.27■□□□□ 0.36
VSX1-206ENST00000444511 CEP78Q5JTW2 689 aa17.27■□□□□ 0.36
VSX1-206ENST00000444511 LCN1P1Q5VSP4 162 aa17.27■□□□□ 0.36
VSX1-206ENST00000444511 DEGS2Q6QHC5 323 aa17.27■□□□□ 0.36
VSX1-206ENST00000444511 THAP5Q7Z6K1 395 aa17.27■□□□□ 0.36
VSX1-206ENST00000444511 LINC01006Q8NI28 216 aa17.27■□□□□ 0.36
VSX1-206ENST00000444511 TEAD3Q99594 435 aa17.27■□□□□ 0.36
VSX1-206ENST00000444511 FAM206AQ9NX38 181 aa17.27■□□□□ 0.36
VSX1-206ENST00000444511 ZNRD1Q9P1U0 126 aa17.27■□□□□ 0.36
VSX1-206ENST00000444511 RHBDL1O75783 438 aa17.26■□□□□ 0.35
VSX1-206ENST00000444511 PAHP00439 452 aa17.26■□□□□ 0.35
VSX1-206ENST00000444511 ACAA1P09110 424 aaPredicted RBP17.26■□□□□ 0.35
VSX1-206ENST00000444511 DLX1P56177 255 aa17.26■□□□□ 0.35
VSX1-206ENST00000444511 CAV3P56539 151 aa17.26■□□□□ 0.35
VSX1-206ENST00000444511 DEFA6Q01524 100 aa17.26■□□□□ 0.35
VSX1-206ENST00000444511 KLRD1Q13241 179 aa17.26■□□□□ 0.35
VSX1-206ENST00000444511 TAF9Q16594 264 aa17.26■□□□□ 0.35
VSX1-206ENST00000444511 CEACAM21Q3KPI0 293 aa17.26■□□□□ 0.35
VSX1-206ENST00000444511 C1orf122Q6ZSJ8 110 aa17.26■□□□□ 0.35
VSX1-206ENST00000444511 DNAJC9Q8WXX5 260 aa17.26■□□□□ 0.35
VSX1-206ENST00000444511 ITFG2Q969R8 447 aa17.26■□□□□ 0.35
VSX1-206ENST00000444511 PBOV1Q9GZY1 135 aa17.26■□□□□ 0.35
VSX1-206ENST00000444511 OR51I2Q9H344 312 aa17.26■□□□□ 0.35
VSX1-206ENST00000444511 PAPOLBQ9NRJ5 636 aaKnown RBP17.26■□□□□ 0.35
VSX1-206ENST00000444511 TMEM14AQ9Y6G1 99 aa17.26■□□□□ 0.35
VSX1-206ENST00000444511 M0QZ24 198 aa17.25■□□□□ 0.35
VSX1-206ENST00000444511 M0R1W7 72 aa17.25■□□□□ 0.35
VSX1-206ENST00000444511 TIMM23O14925 209 aa17.25■□□□□ 0.35
VSX1-206ENST00000444511 GSC2O15499 205 aa17.25■□□□□ 0.35
VSX1-206ENST00000444511 ZNF254O75437 659 aa17.25■□□□□ 0.35
VSX1-206ENST00000444511 ATP6V1B1P15313 513 aa17.25■□□□□ 0.35
VSX1-206ENST00000444511 CRISP1P54107 249 aa17.25■□□□□ 0.35
VSX1-206ENST00000444511 RIPPLY1Q0D2K3 151 aa17.25■□□□□ 0.35
VSX1-206ENST00000444511 BLMHQ13867 455 aa17.25■□□□□ 0.35
VSX1-206ENST00000444511 NCR3LG1Q68D85 454 aa17.25■□□□□ 0.35
VSX1-206ENST00000444511 TRPM8Q7Z2W7 1104 aa17.25■□□□□ 0.35
VSX1-206ENST00000444511 TMEM185AQ8NFB2 350 aa17.25■□□□□ 0.35
VSX1-206ENST00000444511 ZNF671Q8TAW3 534 aa17.25■□□□□ 0.35
VSX1-206ENST00000444511 OR51E1Q8TCB6 317 aa17.25■□□□□ 0.35
VSX1-206ENST00000444511 ASB17Q8WXJ9 295 aa17.25■□□□□ 0.35
VSX1-206ENST00000444511 METTL8Q9H825 291 aaKnown RBP17.25■□□□□ 0.35
VSX1-206ENST00000444511 VPREB3Q9UKI3 123 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms