RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 PRDM7Q9NQW5 492 aa17.67■□□□□ 0.42
SHANK1-203ENST00000391813 TRAPPC1Q9Y5R8 145 aa17.67■□□□□ 0.42
SHANK1-203ENST00000391813 hCG_1809904A0A1W2PP81 198 aa17.67■□□□□ 0.42
SHANK1-203ENST00000391813 A0A1W2PR64 198 aa17.67■□□□□ 0.42
SHANK1-203ENST00000391813 A0A1W2PRV1 198 aa17.67■□□□□ 0.42
SHANK1-203ENST00000391813 TAS2R45P59539 299 aa17.67■□□□□ 0.42
SHANK1-203ENST00000391813 ZNF92Q03936 586 aa17.67■□□□□ 0.42
SHANK1-203ENST00000391813 SURF2Q15527 256 aaPredicted RBP17.67■□□□□ 0.42
SHANK1-203ENST00000391813 CA13Q8N1Q1 262 aa17.67■□□□□ 0.42
SHANK1-203ENST00000391813 BAHD1Q8TBE0 780 aaPredicted RBP17.67■□□□□ 0.42
SHANK1-203ENST00000391813 ANKUB1A6NFN9 424 aa17.66■□□□□ 0.42
SHANK1-203ENST00000391813 SPINT2O43291 252 aa17.66■□□□□ 0.42
SHANK1-203ENST00000391813 CST7O76096 145 aa17.66■□□□□ 0.42
SHANK1-203ENST00000391813 NAT2P11245 290 aa17.66■□□□□ 0.42
SHANK1-203ENST00000391813 SLC25A4P12235 298 aa17.66■□□□□ 0.42
SHANK1-203ENST00000391813 ENPP1P22413 925 aa17.66■□□□□ 0.42
SHANK1-203ENST00000391813 FAM209BQ5JX69 171 aa17.66■□□□□ 0.42
SHANK1-203ENST00000391813 OR5B3Q8NH48 314 aa17.66■□□□□ 0.42
SHANK1-203ENST00000391813 INTS12Q96CB8 462 aaKnown RBP17.66■□□□□ 0.42
SHANK1-203ENST00000391813 TRAF3IP2O43734 574 aaPredicted RBP17.66■□□□□ 0.42
SHANK1-203ENST00000391813 LANCL1O43813 399 aa17.66■□□□□ 0.42
SHANK1-203ENST00000391813 CD1CP29017 333 aa17.66■□□□□ 0.42
SHANK1-203ENST00000391813 EXT1Q16394 746 aa17.66■□□□□ 0.42
SHANK1-203ENST00000391813 TCTEX1D1Q8N7M0 179 aa17.66■□□□□ 0.42
SHANK1-203ENST00000391813 RBMXL3Q8N7X1 1067 aaKnown RBP17.66■□□□□ 0.42
SHANK1-203ENST00000391813 SMRP1Q8NCR6 262 aa17.66■□□□□ 0.42
SHANK1-203ENST00000391813 SLC24A4Q8NFF2 622 aa17.66■□□□□ 0.42
SHANK1-203ENST00000391813 OR4D9Q8NGE8 314 aa17.66■□□□□ 0.42
SHANK1-203ENST00000391813 OR52N4Q8NGI2 321 aa17.66■□□□□ 0.42
SHANK1-203ENST00000391813 TECTBQ96PL2 329 aa17.66■□□□□ 0.42
SHANK1-203ENST00000391813 NRSN2Q9GZP1 204 aa17.66■□□□□ 0.42
SHANK1-203ENST00000391813 LSM2Q9Y333 95 aaKnown RBP17.66■□□□□ 0.42
SHANK1-203ENST00000391813 SPTY2D1-AS1A0A0U1RR47 76 aa17.66■□□□□ 0.42
SHANK1-203ENST00000391813 DEGS1O15121 323 aa17.66■□□□□ 0.42
SHANK1-203ENST00000391813 NKX2-2O95096 273 aa17.66■□□□□ 0.42
SHANK1-203ENST00000391813 CT45A6P0DMU7 189 aa17.66■□□□□ 0.42
SHANK1-203ENST00000391813 CT45A5P0DMU8 189 aa17.66■□□□□ 0.42
SHANK1-203ENST00000391813 CT45A7P0DMV0 189 aa17.66■□□□□ 0.42
SHANK1-203ENST00000391813 CT45A8P0DMV1 189 aa17.66■□□□□ 0.42
SHANK1-203ENST00000391813 CT45A9P0DMV2 189 aa17.66■□□□□ 0.42
SHANK1-203ENST00000391813 SULT1A1P50225 295 aa17.66■□□□□ 0.42
SHANK1-203ENST00000391813 TMEM33P57088 247 aa17.66■□□□□ 0.42
SHANK1-203ENST00000391813 CT45A2Q5DJT8 189 aa17.66■□□□□ 0.42
SHANK1-203ENST00000391813 CT45A1Q5HYN5 189 aa17.66■□□□□ 0.42
SHANK1-203ENST00000391813 CT45A3Q8NHU0 189 aa17.66■□□□□ 0.42
SHANK1-203ENST00000391813 OR51B6Q9H340 312 aa17.66■□□□□ 0.42
SHANK1-203ENST00000391813 RGPD4Q7Z3J3 1758 aa17.66■□□□□ 0.42
SHANK1-203ENST00000391813 HSBP1O75506 76 aa17.66■□□□□ 0.42
SHANK1-203ENST00000391813 IL9P15248 144 aa17.66■□□□□ 0.42
SHANK1-203ENST00000391813 THBS4P35443 961 aa17.66■□□□□ 0.42
SHANK1-203ENST00000391813 GPR3P46089 330 aa17.66■□□□□ 0.42
SHANK1-203ENST00000391813 RUNX2Q13950 521 aa17.66■□□□□ 0.42
SHANK1-203ENST00000391813 LANCL3Q6ZV70 420 aa17.66■□□□□ 0.42
SHANK1-203ENST00000391813 C1orf210Q8IVY1 113 aa17.66■□□□□ 0.42
SHANK1-203ENST00000391813 ZNF683Q8IZ20 524 aa17.66■□□□□ 0.42
SHANK1-203ENST00000391813 NT5CQ8TCD5 201 aa17.66■□□□□ 0.42
SHANK1-203ENST00000391813 ISOC2Q96AB3 205 aa17.66■□□□□ 0.42
SHANK1-203ENST00000391813 MMP25Q9NPA2 562 aa17.66■□□□□ 0.42
SHANK1-203ENST00000391813 MCM3APO60318 1980 aa17.65■□□□□ 0.42
SHANK1-203ENST00000391813 ZNF816-ZNF321PA0A0X1KG74 233 aa17.65■□□□□ 0.42
SHANK1-203ENST00000391813 MFSD2BA6NFX1 497 aa17.65■□□□□ 0.42
SHANK1-203ENST00000391813 PTBP3O95758 552 aaKnown RBP17.65■□□□□ 0.42
SHANK1-203ENST00000391813 ARG1P05089 322 aa17.65■□□□□ 0.42
SHANK1-203ENST00000391813 ABOP16442 354 aa17.65■□□□□ 0.42
SHANK1-203ENST00000391813 LAIR1Q6GTX8 287 aa17.65■□□□□ 0.42
SHANK1-203ENST00000391813 C6orf15Q6UXA7 325 aaPredicted RBP17.65■□□□□ 0.42
SHANK1-203ENST00000391813 THSD4Q6ZMP0 1018 aa17.65■□□□□ 0.42
SHANK1-203ENST00000391813 ZNF321PQ8N8H1 164 aa17.65■□□□□ 0.42
SHANK1-203ENST00000391813 TMEM178AQ8NBL3 297 aa17.65■□□□□ 0.42
SHANK1-203ENST00000391813 RBFOX3A6NFN3 312 aa17.65■□□□□ 0.42
SHANK1-203ENST00000391813 SSR4P51571 173 aa17.65■□□□□ 0.42
SHANK1-203ENST00000391813 PLGLAQ15195 96 aa17.65■□□□□ 0.42
SHANK1-203ENST00000391813 NKAIN1Q4KMZ8 207 aa17.65■□□□□ 0.42
SHANK1-203ENST00000391813 C10orf111Q8N326 155 aa17.65■□□□□ 0.42
SHANK1-203ENST00000391813 PACRGQ96M98 296 aaPredicted RBP17.65■□□□□ 0.42
SHANK1-203ENST00000391813 ZPBPQ9BS86 351 aa17.65■□□□□ 0.42
SHANK1-203ENST00000391813 TWSG1Q9GZX9 223 aa17.65■□□□□ 0.42
SHANK1-203ENST00000391813 PARP11Q9NR21 331 aa17.65■□□□□ 0.42
SHANK1-203ENST00000391813 NRXN2Q9P2S2 1712 aa17.65■□□□□ 0.42
SHANK1-203ENST00000391813 PLSCR5A0PG75 271 aa17.65■□□□□ 0.42
SHANK1-203ENST00000391813 CDC42EP2O14613 210 aa17.65■□□□□ 0.42
SHANK1-203ENST00000391813 WISP3O95389 354 aaPredicted RBP17.65■□□□□ 0.42
SHANK1-203ENST00000391813 CISD3P0C7P0 127 aa17.65■□□□□ 0.42
SHANK1-203ENST00000391813 TIAL1Q01085 375 aaKnown RBP eCLIP17.65■□□□□ 0.42
SHANK1-203ENST00000391813 PMS2P11Q13670 270 aa17.65■□□□□ 0.42
SHANK1-203ENST00000391813 SHBQ15464 509 aa17.65■□□□□ 0.42
SHANK1-203ENST00000391813 NUBPLQ8TB37 319 aa17.65■□□□□ 0.42
SHANK1-203ENST00000391813 GPR87Q9BY21 358 aa17.65■□□□□ 0.42
SHANK1-203ENST00000391813 NRASP01111 189 aa17.64■□□□□ 0.42
SHANK1-203ENST00000391813 GUSBP08236 651 aa17.64■□□□□ 0.42
SHANK1-203ENST00000391813 NKAIN2Q5VXU1 208 aa17.64■□□□□ 0.42
SHANK1-203ENST00000391813 SLC25A42Q86VD7 318 aa17.64■□□□□ 0.42
SHANK1-203ENST00000391813 ZNF775Q96BV0 537 aaPredicted RBP17.64■□□□□ 0.42
SHANK1-203ENST00000391813 TIPARPQ7Z3E1 657 aaKnown RBP17.64■□□□□ 0.41
SHANK1-203ENST00000391813 OR2C3Q8N628 320 aa17.64■□□□□ 0.41
SHANK1-203ENST00000391813 SLC26A10Q8NG04 563 aa17.64■□□□□ 0.41
SHANK1-203ENST00000391813 MVB12AQ96EY5 273 aa17.64■□□□□ 0.41
SHANK1-203ENST00000391813 RPP25Q9BUL9 199 aaKnown RBP17.64■□□□□ 0.41
SHANK1-203ENST00000391813 DHCR7Q9UBM7 475 aaKnown RBP17.64■□□□□ 0.41
SHANK1-203ENST00000391813 TNFSF18Q9UNG2 199 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms