RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 LRRC75A-AS1Q8N1F1 130 aa9.05□□□□□ -0.96
COL5A1-202ENST00000371820 ZNF511Q8NB15 262 aa9.05□□□□□ -0.96
COL5A1-202ENST00000371820 OR6M1Q8NGM8 313 aa9.05□□□□□ -0.96
COL5A1-202ENST00000371820 OR13C5Q8NGS8 318 aa9.05□□□□□ -0.96
COL5A1-202ENST00000371820 LRRC20Q8TCA0 184 aa9.05□□□□□ -0.96
COL5A1-202ENST00000371820 SMAP2Q8WU79 429 aaPredicted RBP9.05□□□□□ -0.96
COL5A1-202ENST00000371820 TSEN15Q8WW01 171 aaKnown RBP9.05□□□□□ -0.96
COL5A1-202ENST00000371820 TMEM106AQ96A25 262 aa9.05□□□□□ -0.96
COL5A1-202ENST00000371820 APH1AQ96BI3 265 aa9.05□□□□□ -0.96
COL5A1-202ENST00000371820 S100PBPQ96BU1 408 aa9.05□□□□□ -0.96
COL5A1-202ENST00000371820 MUCL1Q96DR8 90 aa9.05□□□□□ -0.96
COL5A1-202ENST00000371820 PLPPR2Q96GM1 343 aa9.05□□□□□ -0.96
COL5A1-202ENST00000371820 ARL5BQ96KC2 179 aa9.05□□□□□ -0.96
COL5A1-202ENST00000371820 CCL19Q99731 98 aa9.05□□□□□ -0.96
COL5A1-202ENST00000371820 SMR3AQ99954 134 aa9.05□□□□□ -0.96
COL5A1-202ENST00000371820 NUDT16L1Q9BRJ7 211 aaKnown RBP9.05□□□□□ -0.96
COL5A1-202ENST00000371820 OR11A1Q9GZK7 315 aa9.05□□□□□ -0.96
COL5A1-202ENST00000371820 HEXA-AS1Q9H8Q6 139 aa9.05□□□□□ -0.96
COL5A1-202ENST00000371820 PARPBPQ9NWS1 579 aa9.05□□□□□ -0.96
COL5A1-202ENST00000371820 ZNF69Q9UC07 566 aa9.05□□□□□ -0.96
COL5A1-202ENST00000371820 HEATR5AQ86XA9 2040 aa9.05□□□□□ -0.96
COL5A1-202ENST00000371820 PRSS37A4D1T9 235 aa9.04□□□□□ -0.96
COL5A1-202ENST00000371820 ZNF716A6NP11 495 aa9.04□□□□□ -0.96
COL5A1-202ENST00000371820 DISC1C4P0D8 188 aa9.04□□□□□ -0.96
COL5A1-202ENST00000371820 MCRIP1C9JLW8 97 aa9.04□□□□□ -0.96
COL5A1-202ENST00000371820 SIAH2O43255 324 aa9.04□□□□□ -0.96
COL5A1-202ENST00000371820 GMDSO60547 372 aa9.04□□□□□ -0.96
COL5A1-202ENST00000371820 RP2O75695 350 aa9.04□□□□□ -0.96
COL5A1-202ENST00000371820 B3GALNT1O75752 331 aa9.04□□□□□ -0.96
COL5A1-202ENST00000371820 HPXP02790 462 aa9.04□□□□□ -0.96
COL5A1-202ENST00000371820 ERCC1P07992 297 aaPredicted RBP9.04□□□□□ -0.96
COL5A1-202ENST00000371820 TBPP20226 339 aa9.04□□□□□ -0.96
COL5A1-202ENST00000371820 PTNP21246 168 aa9.04□□□□□ -0.96
COL5A1-202ENST00000371820 ACHEP22303 614 aa9.04□□□□□ -0.96
COL5A1-202ENST00000371820 VEGFCP49767 419 aa9.04□□□□□ -0.96
COL5A1-202ENST00000371820 DAP3P51398 398 aaKnown RBP9.04□□□□□ -0.96
COL5A1-202ENST00000371820 SEC61A1P61619 476 aaKnown RBP9.04□□□□□ -0.96
COL5A1-202ENST00000371820 NKX6-1P78426 367 aaPredicted RBP9.04□□□□□ -0.96
COL5A1-202ENST00000371820 H3F3AP84243 136 aa9.04□□□□□ -0.96
COL5A1-202ENST00000371820 EXOSC2Q13868 293 aaKnown RBP9.04□□□□□ -0.96
COL5A1-202ENST00000371820 PCGF3Q3KNV8 242 aa9.04□□□□□ -0.96
COL5A1-202ENST00000371820 C2orf76Q3KRA6 126 aa9.04□□□□□ -0.96
COL5A1-202ENST00000371820 TIMM23BQ5SRD1 257 aa9.04□□□□□ -0.96
COL5A1-202ENST00000371820 FBXW9Q5XUX1 488 aa9.04□□□□□ -0.96
COL5A1-202ENST00000371820 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.04□□□□□ -0.96
COL5A1-202ENST00000371820 SCARB1Q8WTV0 552 aa9.04□□□□□ -0.96
COL5A1-202ENST00000371820 TAAR8Q969N4 342 aa9.04□□□□□ -0.96
COL5A1-202ENST00000371820 FAM3DQ96BQ1 224 aa9.04□□□□□ -0.96
COL5A1-202ENST00000371820 SCGB3A2Q96PL1 93 aa9.04□□□□□ -0.96
COL5A1-202ENST00000371820 SF3B5Q9BWJ5 86 aaKnown RBP9.04□□□□□ -0.96
COL5A1-202ENST00000371820 KLK11Q9UBX7 282 aa9.04□□□□□ -0.96
COL5A1-202ENST00000371820 PRSS50Q9UI38 385 aa9.04□□□□□ -0.96
COL5A1-202ENST00000371820 ING1Q9UK53 422 aaPredicted RBP9.04□□□□□ -0.96
COL5A1-202ENST00000371820 RAB22AQ9UL26 194 aa9.04□□□□□ -0.96
COL5A1-202ENST00000371820 HHLA2Q9UM44 414 aa9.04□□□□□ -0.96
COL5A1-202ENST00000371820 RNF115Q9Y4L5 304 aa9.04□□□□□ -0.96
COL5A1-202ENST00000371820 A0A1W2PPL8 197 aa9.03□□□□□ -0.96
COL5A1-202ENST00000371820 CIB4A0PJX0 185 aa9.03□□□□□ -0.96
COL5A1-202ENST00000371820 ZNF814B7Z6K7 855 aa9.03□□□□□ -0.96
COL5A1-202ENST00000371820 F5H5P2 479 aa9.03□□□□□ -0.96
COL5A1-202ENST00000371820 VAMP5O95183 116 aa9.03□□□□□ -0.96
COL5A1-202ENST00000371820 HLA-DQA2P01906 255 aa9.03□□□□□ -0.96
COL5A1-202ENST00000371820 LPLP06858 475 aa9.03□□□□□ -0.96
COL5A1-202ENST00000371820 CD3EP07766 207 aa9.03□□□□□ -0.96
COL5A1-202ENST00000371820 UBCP0CG48 685 aaKnown RBP9.03□□□□□ -0.96
COL5A1-202ENST00000371820 NR2C1P13056 603 aa9.03□□□□□ -0.96
COL5A1-202ENST00000371820 GTF2F2P13984 249 aa9.03□□□□□ -0.96
COL5A1-202ENST00000371820 COX5AP20674 150 aa9.03□□□□□ -0.96
COL5A1-202ENST00000371820 MPZP25189 248 aa9.03□□□□□ -0.96
COL5A1-202ENST00000371820 LOXP28300 417 aaPredicted RBP9.03□□□□□ -0.96
COL5A1-202ENST00000371820 EGR4Q05215 589 aa9.03□□□□□ -0.96
COL5A1-202ENST00000371820 PPA1Q15181 289 aa9.03□□□□□ -0.96
COL5A1-202ENST00000371820 STK11Q15831 433 aa9.03□□□□□ -0.96
COL5A1-202ENST00000371820 MESTQ5EB52 335 aa9.03□□□□□ -0.96
COL5A1-202ENST00000371820 OR7E24Q6IFN5 339 aa9.03□□□□□ -0.96
COL5A1-202ENST00000371820 STEAP1BQ6NZ63 245 aa9.03□□□□□ -0.96
COL5A1-202ENST00000371820 FAHD2BQ6P2I3 314 aaPredicted RBP9.03□□□□□ -0.96
COL5A1-202ENST00000371820 TMEM65Q6PI78 240 aa9.03□□□□□ -0.96
COL5A1-202ENST00000371820 Q71RC1 249 aaPredicted RBP9.03□□□□□ -0.96
COL5A1-202ENST00000371820 UTS2BQ765I0 119 aa9.03□□□□□ -0.96
COL5A1-202ENST00000371820 SLC36A1Q7Z2H8 476 aa9.03□□□□□ -0.96
COL5A1-202ENST00000371820 DPY19L4Q7Z388 723 aa9.03□□□□□ -0.96
COL5A1-202ENST00000371820 ABHD12BQ7Z5M8 362 aaPredicted RBP9.03□□□□□ -0.96
COL5A1-202ENST00000371820 SLC51BQ86UW2 128 aa9.03□□□□□ -0.96
COL5A1-202ENST00000371820 COMMD7Q86VX2 200 aa9.03□□□□□ -0.96
COL5A1-202ENST00000371820 CCDC36Q8IYA8 594 aa9.03□□□□□ -0.96
COL5A1-202ENST00000371820 DTX3Q8N9I9 347 aa9.03□□□□□ -0.96
COL5A1-202ENST00000371820 CCDC54Q8NEL0 328 aa9.03□□□□□ -0.96
COL5A1-202ENST00000371820 OR2AK2Q8NG84 335 aa9.03□□□□□ -0.96
COL5A1-202ENST00000371820 OR11H4Q8NGC9 324 aa9.03□□□□□ -0.96
COL5A1-202ENST00000371820 MFSD8Q8NHS3 518 aa9.03□□□□□ -0.96
COL5A1-202ENST00000371820 GPX8Q8TED1 209 aa9.03□□□□□ -0.96
COL5A1-202ENST00000371820 TMEM171Q8WVE6 324 aa9.03□□□□□ -0.96
COL5A1-202ENST00000371820 FAHD2AQ96GK7 314 aa9.03□□□□□ -0.96
COL5A1-202ENST00000371820 HS3ST6Q96QI5 342 aa9.03□□□□□ -0.96
COL5A1-202ENST00000371820 TSPAN32Q96QS1 320 aa9.03□□□□□ -0.96
COL5A1-202ENST00000371820 GFI1Q99684 422 aa9.03□□□□□ -0.96
COL5A1-202ENST00000371820 GINS4Q9BRT9 223 aa9.03□□□□□ -0.96
COL5A1-202ENST00000371820 DNTTIP1Q9H147 329 aa9.03□□□□□ -0.96
COL5A1-202ENST00000371820 PPA2Q9H2U2 334 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms