RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 TSTD3H0UI37 97 aa11.32□□□□□ -0.6
DNMT3A-202ENST00000321117 DXOO77932 396 aaKnown RBP11.32□□□□□ -0.6
DNMT3A-202ENST00000321117 FOSL1P15407 271 aa11.32□□□□□ -0.6
DNMT3A-202ENST00000321117 CD27P26842 260 aa11.32□□□□□ -0.6
DNMT3A-202ENST00000321117 TFF2Q03403 129 aa11.32□□□□□ -0.6
DNMT3A-202ENST00000321117 HAGHQ16775 308 aa11.32□□□□□ -0.6
DNMT3A-202ENST00000321117 WDR5BQ86VZ2 330 aa11.32□□□□□ -0.6
DNMT3A-202ENST00000321117 FOXQ1Q9C009 403 aa11.32□□□□□ -0.6
DNMT3A-202ENST00000321117 C19orf12Q9NSK7 152 aa11.32□□□□□ -0.6
DNMT3A-202ENST00000321117 CA14Q9ULX7 337 aa11.32□□□□□ -0.6
DNMT3A-202ENST00000321117 CNOT4O95628 575 aaKnown RBP11.32□□□□□ -0.6
DNMT3A-202ENST00000321117 IDH3GP51553 393 aaPredicted RBP11.32□□□□□ -0.6
DNMT3A-202ENST00000321117 LY6G6FQ5SQ64 297 aa11.32□□□□□ -0.6
DNMT3A-202ENST00000321117 GGNBP1Q5YKI7 109 aa11.32□□□□□ -0.6
DNMT3A-202ENST00000321117 ZNF709Q8N972 641 aa11.32□□□□□ -0.6
DNMT3A-202ENST00000321117 SP7Q8TDD2 431 aaPredicted RBP11.32□□□□□ -0.6
DNMT3A-202ENST00000321117 LIPHQ8WWY8 451 aa11.32□□□□□ -0.6
DNMT3A-202ENST00000321117 PP6455Q8WZ26 134 aa11.32□□□□□ -0.6
DNMT3A-202ENST00000321117 AQP3Q92482 292 aa11.32□□□□□ -0.6
DNMT3A-202ENST00000321117 ISOC2Q96AB3 205 aa11.32□□□□□ -0.6
DNMT3A-202ENST00000321117 CRISPLD2Q9H0B8 497 aa11.32□□□□□ -0.6
DNMT3A-202ENST00000321117 OR5AC2Q9NZP5 309 aa11.32□□□□□ -0.6
DNMT3A-202ENST00000321117 AK3Q9UIJ7 227 aa11.32□□□□□ -0.6
DNMT3A-202ENST00000321117 PLXNA4Q9HCM2 1894 aa11.32□□□□□ -0.6
DNMT3A-202ENST00000321117 TTRP02766 147 aa11.32□□□□□ -0.6
DNMT3A-202ENST00000321117 FOLR1P15328 257 aa11.32□□□□□ -0.6
DNMT3A-202ENST00000321117 MECP2P51608 486 aaKnown RBP11.32□□□□□ -0.6
DNMT3A-202ENST00000321117 PLP2Q04941 152 aa11.32□□□□□ -0.6
DNMT3A-202ENST00000321117 AWAT1Q58HT5 328 aa11.32□□□□□ -0.6
DNMT3A-202ENST00000321117 OR8B12Q8NGG6 310 aa11.32□□□□□ -0.6
DNMT3A-202ENST00000321117 RTTNQ86VV8 2226 aa11.31□□□□□ -0.6
DNMT3A-202ENST00000321117 PLXNB3Q9ULL4 1909 aa11.31□□□□□ -0.6
DNMT3A-202ENST00000321117 RNF222A6NCQ9 220 aa11.31□□□□□ -0.6
DNMT3A-202ENST00000321117 ZNF724A8MTY0 619 aa11.31□□□□□ -0.6
DNMT3A-202ENST00000321117 GPR137BO60478 399 aa11.31□□□□□ -0.6
DNMT3A-202ENST00000321117 EIF1BO60739 113 aaKnown RBP11.31□□□□□ -0.6
DNMT3A-202ENST00000321117 FOSL2P15408 326 aa11.31□□□□□ -0.6
DNMT3A-202ENST00000321117 RBP2P50120 134 aa11.31□□□□□ -0.6
DNMT3A-202ENST00000321117 HOGA1Q86XE5 327 aa11.31□□□□□ -0.6
DNMT3A-202ENST00000321117 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.31□□□□□ -0.6
DNMT3A-202ENST00000321117 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.31□□□□□ -0.6
DNMT3A-202ENST00000321117 H7C1Q1 480 aa11.31□□□□□ -0.6
DNMT3A-202ENST00000321117 ANGPTL7O43827 346 aa11.31□□□□□ -0.6
DNMT3A-202ENST00000321117 SMIM6P0DI80 62 aa11.31□□□□□ -0.6
DNMT3A-202ENST00000321117 BCKDHBP21953 392 aa11.31□□□□□ -0.6
DNMT3A-202ENST00000321117 THBS4P35443 961 aa11.31□□□□□ -0.6
DNMT3A-202ENST00000321117 DCDP81605 110 aaKnown RBP11.31□□□□□ -0.6
DNMT3A-202ENST00000321117 IKZF1Q13422 519 aa11.31□□□□□ -0.6
DNMT3A-202ENST00000321117 TEX30Q5JUR7 227 aa11.31□□□□□ -0.6
DNMT3A-202ENST00000321117 OR6S1Q8NH40 331 aa11.31□□□□□ -0.6
DNMT3A-202ENST00000321117 MRPL38Q96DV4 380 aaKnown RBP11.31□□□□□ -0.6
DNMT3A-202ENST00000321117 SLC2A8Q9NY64 477 aa11.31□□□□□ -0.6
DNMT3A-202ENST00000321117 FAM186AA6NE01 2351 aa11.31□□□□□ -0.6
DNMT3A-202ENST00000321117 G3V3Y1 287 aa11.31□□□□□ -0.6
DNMT3A-202ENST00000321117 MFNGO00587 321 aa11.31□□□□□ -0.6
DNMT3A-202ENST00000321117 NAT2P11245 290 aa11.31□□□□□ -0.6
DNMT3A-202ENST00000321117 TMEM268Q5VZI3 342 aa11.31□□□□□ -0.6
DNMT3A-202ENST00000321117 BEND4Q6ZU67 534 aa11.31□□□□□ -0.6
DNMT3A-202ENST00000321117 C6orf201Q7Z4U5 140 aa11.31□□□□□ -0.6
DNMT3A-202ENST00000321117 ROBO4Q8WZ75 1007 aa11.31□□□□□ -0.6
DNMT3A-202ENST00000321117 OR6C1Q96RD1 312 aa11.31□□□□□ -0.6
DNMT3A-202ENST00000321117 RP1P56715 2156 aa11.3□□□□□ -0.6
DNMT3A-202ENST00000321117 FREM3P0C091 2139 aa11.3□□□□□ -0.6
DNMT3A-202ENST00000321117 P04436 131 aa11.3□□□□□ -0.6
DNMT3A-202ENST00000321117 DAOP14920 347 aa11.3□□□□□ -0.6
DNMT3A-202ENST00000321117 ZNF684Q5T5D7 378 aa11.3□□□□□ -0.6
DNMT3A-202ENST00000321117 ZFP62Q8NB50 900 aaPredicted RBP11.3□□□□□ -0.6
DNMT3A-202ENST00000321117 ZNF251Q9BRH9 671 aa11.3□□□□□ -0.6
DNMT3A-202ENST00000321117 ANKRD10Q9NXR5 420 aa11.3□□□□□ -0.6
DNMT3A-202ENST00000321117 C7orf77A4D0Y5 90 aa11.3□□□□□ -0.6
DNMT3A-202ENST00000321117 CD300LBA8K4G0 201 aa11.3□□□□□ -0.6
DNMT3A-202ENST00000321117 RCC1P18754 421 aaPredicted RBP11.3□□□□□ -0.6
DNMT3A-202ENST00000321117 FCARP24071 287 aa11.3□□□□□ -0.6
DNMT3A-202ENST00000321117 MRPS34P82930 218 aaKnown RBP11.3□□□□□ -0.6
DNMT3A-202ENST00000321117 HIST2H3PS2Q5TEC6 136 aa11.3□□□□□ -0.6
DNMT3A-202ENST00000321117 SLC16A14Q7RTX9 510 aa11.3□□□□□ -0.6
DNMT3A-202ENST00000321117 MAML2Q8IZL2 1156 aaPredicted RBP11.3□□□□□ -0.6
DNMT3A-202ENST00000321117 ZSCAN4Q8NAM6 433 aaPredicted RBP11.3□□□□□ -0.6
DNMT3A-202ENST00000321117 SUCNR1Q9BXA5 334 aa11.3□□□□□ -0.6
DNMT3A-202ENST00000321117 A0A1W2PPH5 198 aa11.3□□□□□ -0.6
DNMT3A-202ENST00000321117 C5orf67F2Z3F1 127 aa11.3□□□□□ -0.6
DNMT3A-202ENST00000321117 CFIP05156 583 aa11.3□□□□□ -0.6
DNMT3A-202ENST00000321117 ISG15P05161 165 aa11.3□□□□□ -0.6
DNMT3A-202ENST00000321117 HPNP05981 417 aa11.3□□□□□ -0.6
DNMT3A-202ENST00000321117 SURF2Q15527 256 aaPredicted RBP11.3□□□□□ -0.6
DNMT3A-202ENST00000321117 DRAM2Q6UX65 266 aa11.3□□□□□ -0.6
DNMT3A-202ENST00000321117 MRPL21Q7Z2W9 205 aaKnown RBP11.3□□□□□ -0.6
DNMT3A-202ENST00000321117 DPPA2Q7Z7J5 298 aa11.3□□□□□ -0.6
DNMT3A-202ENST00000321117 LRRC75AQ8NAA5 344 aa11.3□□□□□ -0.6
DNMT3A-202ENST00000321117 TMEM104Q8NE00 496 aa11.3□□□□□ -0.6
DNMT3A-202ENST00000321117 SGCZQ96LD1 299 aa11.3□□□□□ -0.6
DNMT3A-202ENST00000321117 GPR132Q9UNW8 380 aa11.3□□□□□ -0.6
DNMT3A-202ENST00000321117 AMDHD2Q9Y303 409 aa11.3□□□□□ -0.6
DNMT3A-202ENST00000321117 A6NLC8 198 aa11.29□□□□□ -0.6
DNMT3A-202ENST00000321117 NXPH3O95157 252 aa11.29□□□□□ -0.6
DNMT3A-202ENST00000321117 IGSF11Q5DX21 431 aa11.29□□□□□ -0.6
DNMT3A-202ENST00000321117 VAX1Q5SQQ9 334 aa11.29□□□□□ -0.6
DNMT3A-202ENST00000321117 C9orf40Q8IXQ3 194 aa11.29□□□□□ -0.6
DNMT3A-202ENST00000321117 MKXQ8IYA7 352 aa11.29□□□□□ -0.6
DNMT3A-202ENST00000321117 OR1L3Q8NH93 324 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms