RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 SLCO5A1Q9H2Y9 848 aa13.93□□□□□ -0.18
CTDSP1-201ENST00000273062 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.93□□□□□ -0.18
CTDSP1-201ENST00000273062 CST2P09228 141 aa13.92□□□□□ -0.18
CTDSP1-201ENST00000273062 GABRR1P24046 479 aa13.92□□□□□ -0.18
CTDSP1-201ENST00000273062 CD82P27701 267 aa13.92□□□□□ -0.18
CTDSP1-201ENST00000273062 RPL4P36578 427 aaKnown RBP13.92□□□□□ -0.18
CTDSP1-201ENST00000273062 RAB42Q8N4Z0 105 aa13.92□□□□□ -0.18
CTDSP1-201ENST00000273062 MS4A6EQ96DS6 147 aa13.92□□□□□ -0.18
CTDSP1-201ENST00000273062 SLC22A13Q9Y226 551 aa13.92□□□□□ -0.18
CTDSP1-201ENST00000273062 PPIAL4AQ9Y536 164 aa13.92□□□□□ -0.18
CTDSP1-201ENST00000273062 KIR2DL5BA0A0G2JN68 375 aa13.92□□□□□ -0.18
CTDSP1-201ENST00000273062 KIR2DL5BA0A0G2JPC4 375 aa13.92□□□□□ -0.18
CTDSP1-201ENST00000273062 A6NIZ1 184 aa13.92□□□□□ -0.18
CTDSP1-201ENST00000273062 IL6RP08887 468 aaPredicted RBP13.92□□□□□ -0.18
CTDSP1-201ENST00000273062 RAP1BP61224 184 aa13.92□□□□□ -0.18
CTDSP1-201ENST00000273062 WDR38Q5JTN6 314 aa13.92□□□□□ -0.18
CTDSP1-201ENST00000273062 VHLLQ6RSH7 139 aa13.92□□□□□ -0.18
CTDSP1-201ENST00000273062 HOGA1Q86XE5 327 aa13.92□□□□□ -0.18
CTDSP1-201ENST00000273062 SFTPA2Q8IWL1 248 aa13.92□□□□□ -0.18
CTDSP1-201ENST00000273062 KIR2DL5AQ8N109 375 aa13.92□□□□□ -0.18
CTDSP1-201ENST00000273062 COX18Q8N8Q8 333 aa13.92□□□□□ -0.18
CTDSP1-201ENST00000273062 FAM131CQ96AQ9 280 aa13.92□□□□□ -0.18
CTDSP1-201ENST00000273062 ALKBH3Q96Q83 286 aaPredicted RBP13.92□□□□□ -0.18
CTDSP1-201ENST00000273062 AMELYQ99218 206 aa13.92□□□□□ -0.18
CTDSP1-201ENST00000273062 NUDT9Q9BW91 350 aa13.92□□□□□ -0.18
CTDSP1-201ENST00000273062 SERINC1Q9NRX5 453 aa13.92□□□□□ -0.18
CTDSP1-201ENST00000273062 SPEGQ15772 3267 aa13.92□□□□□ -0.18
CTDSP1-201ENST00000273062 CLEC3AO75596 197 aa13.91□□□□□ -0.18
CTDSP1-201ENST00000273062 SFT2D2O95562 160 aa13.91□□□□□ -0.18
CTDSP1-201ENST00000273062 WNT5AP41221 380 aa13.91□□□□□ -0.18
CTDSP1-201ENST00000273062 RND3P61587 244 aa13.91□□□□□ -0.18
CTDSP1-201ENST00000273062 C1orf194Q5T5A4 169 aa13.91□□□□□ -0.18
CTDSP1-201ENST00000273062 RTL6Q6ICC9 239 aa13.91□□□□□ -0.18
CTDSP1-201ENST00000273062 TMEM92Q6UXU6 159 aa13.91□□□□□ -0.18
CTDSP1-201ENST00000273062 TMEM182Q6ZP80 229 aaPredicted RBP13.91□□□□□ -0.18
CTDSP1-201ENST00000273062 C1orf87Q8N0U7 546 aa13.91□□□□□ -0.18
CTDSP1-201ENST00000273062 AQP3Q92482 292 aa13.91□□□□□ -0.18
CTDSP1-201ENST00000273062 MRGPRX1Q96LB2 322 aa13.91□□□□□ -0.18
CTDSP1-201ENST00000273062 MTHFD2LQ9H903 347 aaPredicted RBP13.91□□□□□ -0.18
CTDSP1-201ENST00000273062 FOXJ2Q9P0K8 574 aa13.91□□□□□ -0.18
CTDSP1-201ENST00000273062 APOBEC3BQ9UH17 382 aaKnown RBP13.91□□□□□ -0.18
CTDSP1-201ENST00000273062 LIPGQ9Y5X9 500 aa13.91□□□□□ -0.18
CTDSP1-201ENST00000273062 ITGB1BP1O14713 200 aa13.91□□□□□ -0.18
CTDSP1-201ENST00000273062 IFNA6P05013 189 aa13.91□□□□□ -0.18
CTDSP1-201ENST00000273062 TNFSF10P50591 281 aa13.91□□□□□ -0.18
CTDSP1-201ENST00000273062 CCR4P51679 360 aa13.91□□□□□ -0.18
CTDSP1-201ENST00000273062 UCP3P55916 312 aa13.91□□□□□ -0.18
CTDSP1-201ENST00000273062 PMS2P11Q13670 270 aa13.91□□□□□ -0.18
CTDSP1-201ENST00000273062 ZIC1Q15915 447 aa13.91□□□□□ -0.18
CTDSP1-201ENST00000273062 CHST4Q8NCG5 386 aa13.91□□□□□ -0.18
CTDSP1-201ENST00000273062 FAM46BQ96A09 425 aa13.91□□□□□ -0.18
CTDSP1-201ENST00000273062 GAL3ST2Q9H3Q3 398 aa13.91□□□□□ -0.18
CTDSP1-201ENST00000273062 GTF2A1LQ9UNN4 478 aa13.91□□□□□ -0.18
CTDSP1-201ENST00000273062 SCN3AQ9NY46 2000 aa13.91□□□□□ -0.18
CTDSP1-201ENST00000273062 KNL1Q8NG31 2342 aa13.9□□□□□ -0.18
CTDSP1-201ENST00000273062 XKRY2A2RUG3 117 aa13.9□□□□□ -0.18
CTDSP1-201ENST00000273062 A8MXE2 369 aa13.9□□□□□ -0.18
CTDSP1-201ENST00000273062 XKRYO14609 159 aa13.9□□□□□ -0.18
CTDSP1-201ENST00000273062 SLC35G6P0C7Q6 338 aa13.9□□□□□ -0.18
CTDSP1-201ENST00000273062 GNB3P16520 340 aa13.9□□□□□ -0.18
CTDSP1-201ENST00000273062 CFPP27918 469 aa13.9□□□□□ -0.18
CTDSP1-201ENST00000273062 SQSTM1Q13501 440 aa13.9□□□□□ -0.18
CTDSP1-201ENST00000273062 PRSS8Q16651 343 aa13.9□□□□□ -0.18
CTDSP1-201ENST00000273062 FCRL6Q6DN72 434 aa13.9□□□□□ -0.18
CTDSP1-201ENST00000273062 ULK3Q6PHR2 472 aa13.9□□□□□ -0.18
CTDSP1-201ENST00000273062 OPN5Q6U736 354 aa13.9□□□□□ -0.18
CTDSP1-201ENST00000273062 MAML2Q8IZL2 1156 aaPredicted RBP13.9□□□□□ -0.18
CTDSP1-201ENST00000273062 C11orf42Q8N5U0 333 aa13.9□□□□□ -0.18
CTDSP1-201ENST00000273062 Q8NFD4 153 aa13.9□□□□□ -0.18
CTDSP1-201ENST00000273062 COL26A1Q96A83 441 aa13.9□□□□□ -0.18
CTDSP1-201ENST00000273062 COMMD4Q9H0A8 199 aa13.9□□□□□ -0.18
CTDSP1-201ENST00000273062 TAS2R4Q9NYW5 299 aa13.9□□□□□ -0.18
CTDSP1-201ENST00000273062 LSM5Q9Y4Y9 91 aaKnown RBP13.9□□□□□ -0.18
CTDSP1-201ENST00000273062 TCRBV21S2A2A0A5A6 115 aa13.9□□□□□ -0.18
CTDSP1-201ENST00000273062 H7C1C5 153 aa13.9□□□□□ -0.18
CTDSP1-201ENST00000273062 LDB3O75112 727 aa13.9□□□□□ -0.18
CTDSP1-201ENST00000273062 SRP19P09132 144 aaKnown RBP13.9□□□□□ -0.18
CTDSP1-201ENST00000273062 PET100P0DJ07 73 aa13.9□□□□□ -0.18
CTDSP1-201ENST00000273062 HIST1H1TP22492 207 aaPredicted RBP13.9□□□□□ -0.18
CTDSP1-201ENST00000273062 LTBRP36941 435 aa13.9□□□□□ -0.18
CTDSP1-201ENST00000273062 CDKN2AP42771 156 aaKnown RBP13.9□□□□□ -0.18
CTDSP1-201ENST00000273062 POLR2HP52434 150 aaKnown RBP13.9□□□□□ -0.18
CTDSP1-201ENST00000273062 LCN6P62502 163 aa13.9□□□□□ -0.18
CTDSP1-201ENST00000273062 RNF151Q2KHN1 245 aa13.9□□□□□ -0.18
CTDSP1-201ENST00000273062 ZNF260Q3ZCT1 412 aa13.9□□□□□ -0.18
CTDSP1-201ENST00000273062 ABHD17CQ6PCB6 329 aa13.9□□□□□ -0.18
CTDSP1-201ENST00000273062 C16orf54Q6UWD8 224 aa13.9□□□□□ -0.18
CTDSP1-201ENST00000273062 DNASE2BQ8WZ79 361 aa13.9□□□□□ -0.18
CTDSP1-201ENST00000273062 EXTL1Q92935 676 aa13.9□□□□□ -0.18
CTDSP1-201ENST00000273062 BMFQ96LC9 184 aa13.9□□□□□ -0.18
CTDSP1-201ENST00000273062 NMNAT2Q9BZQ4 307 aa13.9□□□□□ -0.18
CTDSP1-201ENST00000273062 CDH20Q9HBT6 801 aa13.9□□□□□ -0.18
CTDSP1-201ENST00000273062 OR52A1Q9UKL2 312 aa13.9□□□□□ -0.18
CTDSP1-201ENST00000273062 CYP8B1Q9UNU6 501 aa13.9□□□□□ -0.18
CTDSP1-201ENST00000273062 RBFOX3A6NFN3 312 aa13.89□□□□□ -0.19
CTDSP1-201ENST00000273062 ZNF860A6NHJ4 632 aa13.89□□□□□ -0.19
CTDSP1-201ENST00000273062 FTCDNL1E5RQL4 147 aa13.89□□□□□ -0.19
CTDSP1-201ENST00000273062 CD55P08174 381 aa13.89□□□□□ -0.19
CTDSP1-201ENST00000273062 TACSTD2P09758 323 aa13.89□□□□□ -0.19
CTDSP1-201ENST00000273062 CDKN1BP46527 198 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms