RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 MBNL2Q5VZF2 373 aaKnown RBP11.08□□□□□ -0.64
SPG7-209ENST00000564047 C22orf42Q6IC83 251 aa11.08□□□□□ -0.64
SPG7-209ENST00000564047 RGS7BPQ6MZT1 257 aaPredicted RBP11.08□□□□□ -0.64
SPG7-209ENST00000564047 MEX3BQ6ZN04 569 aaKnown RBP11.08□□□□□ -0.64
SPG7-209ENST00000564047 KRT74Q7RTS7 529 aa11.08□□□□□ -0.64
SPG7-209ENST00000564047 KLF14Q8TD94 323 aaPredicted RBP11.08□□□□□ -0.64
SPG7-209ENST00000564047 AP3S1Q92572 193 aa11.08□□□□□ -0.64
SPG7-209ENST00000564047 FGGYQ96C11 551 aa11.08□□□□□ -0.64
SPG7-209ENST00000564047 HAVCR1Q96D42 359 aa11.08□□□□□ -0.64
SPG7-209ENST00000564047 CMBLQ96DG6 245 aa11.08□□□□□ -0.64
SPG7-209ENST00000564047 ITPKCQ96DU7 683 aa11.08□□□□□ -0.64
SPG7-209ENST00000564047 SPOCK3Q9BQ16 436 aa11.08□□□□□ -0.64
SPG7-209ENST00000564047 TMEM204Q9BSN7 226 aa11.08□□□□□ -0.64
SPG7-209ENST00000564047 BARHL1Q9BZE3 327 aa11.08□□□□□ -0.64
SPG7-209ENST00000564047 ZNF442Q9H7R0 627 aa11.08□□□□□ -0.64
SPG7-209ENST00000564047 PLEKHA1Q9HB21 404 aa11.08□□□□□ -0.64
SPG7-209ENST00000564047 NOX4Q9NPH5 578 aa11.08□□□□□ -0.64
SPG7-209ENST00000564047 RHBDL2Q9NX52 303 aa11.08□□□□□ -0.64
SPG7-209ENST00000564047 RNF115Q9Y4L5 304 aa11.08□□□□□ -0.64
SPG7-209ENST00000564047 HCFC1P51610 2035 aa11.08□□□□□ -0.64
SPG7-209ENST00000564047 ANKHD1Q8IWZ3 2542 aaKnown RBP11.07□□□□□ -0.64
SPG7-209ENST00000564047 GGT3PA6NGU5 568 aa11.07□□□□□ -0.64
SPG7-209ENST00000564047 CD300LBA8K4G0 201 aa11.07□□□□□ -0.64
SPG7-209ENST00000564047 SHISA9B4DS77 424 aa11.07□□□□□ -0.64
SPG7-209ENST00000564047 LMX1BO60663 402 aa11.07□□□□□ -0.64
SPG7-209ENST00000564047 GOSR1O95249 250 aa11.07□□□□□ -0.64
SPG7-209ENST00000564047 ZNF250P15622 560 aa11.07□□□□□ -0.64
SPG7-209ENST00000564047 ZNF20P17024 532 aa11.07□□□□□ -0.64
SPG7-209ENST00000564047 ACKR3P25106 362 aa11.07□□□□□ -0.64
SPG7-209ENST00000564047 GCH1P30793 250 aa11.07□□□□□ -0.64
SPG7-209ENST00000564047 THBS4P35443 961 aa11.07□□□□□ -0.64
SPG7-209ENST00000564047 DEFA1P59665 94 aa11.07□□□□□ -0.64
SPG7-209ENST00000564047 DEFA3P59666 94 aa11.07□□□□□ -0.64
SPG7-209ENST00000564047 HSD17B12Q53GQ0 312 aa11.07□□□□□ -0.64
SPG7-209ENST00000564047 ADAM5Q6NVV9 412 aa11.07□□□□□ -0.64
SPG7-209ENST00000564047 SERPINA12Q8IW75 414 aa11.07□□□□□ -0.64
SPG7-209ENST00000564047 CSNK2A3Q8NEV1 391 aa11.07□□□□□ -0.64
SPG7-209ENST00000564047 SETD6Q8TBK2 473 aa11.07□□□□□ -0.64
SPG7-209ENST00000564047 TMEM171Q8WVE6 324 aa11.07□□□□□ -0.64
SPG7-209ENST00000564047 ADAT3Q96EY9 351 aaPredicted RBP11.07□□□□□ -0.64
SPG7-209ENST00000564047 PIK3IP1Q96FE7 263 aa11.07□□□□□ -0.64
SPG7-209ENST00000564047 POM121Q96HA1 1249 aa11.07□□□□□ -0.64
SPG7-209ENST00000564047 LURAP1Q96LR2 239 aa11.07□□□□□ -0.64
SPG7-209ENST00000564047 PPIL3Q9H2H8 161 aaKnown RBP11.07□□□□□ -0.64
SPG7-209ENST00000564047 CA10Q9NS85 328 aa11.07□□□□□ -0.64
SPG7-209ENST00000564047 SNTG1Q9NSN8 517 aa11.07□□□□□ -0.64
SPG7-209ENST00000564047 KCNN3Q9UGI6 736 aa11.07□□□□□ -0.64
SPG7-209ENST00000564047 FOXJ3Q9UPW0 622 aa11.07□□□□□ -0.64
SPG7-209ENST00000564047 PIGLQ9Y2B2 252 aa11.07□□□□□ -0.64
SPG7-209ENST00000564047 CMAHPQ9Y471 501 aa11.07□□□□□ -0.64
SPG7-209ENST00000564047 ATP23Q9Y6H3 246 aa11.07□□□□□ -0.64
SPG7-209ENST00000564047 FBN3Q75N90 2809 aa11.07□□□□□ -0.64
SPG7-209ENST00000564047 TRAV1-2A0A0B4J238 106 aa11.06□□□□□ -0.64
SPG7-209ENST00000564047 ZNF816-ZNF321PA0A0X1KG74 233 aa11.06□□□□□ -0.64
SPG7-209ENST00000564047 A0A1W2PPK0 400 aa11.06□□□□□ -0.64
SPG7-209ENST00000564047 VSTM5A8MXK1 200 aa11.06□□□□□ -0.64
SPG7-209ENST00000564047 IQCF6A8MYZ5 107 aa11.06□□□□□ -0.64
SPG7-209ENST00000564047 CTDSP2O14595 271 aa11.06□□□□□ -0.64
SPG7-209ENST00000564047 HNRNPCP07910 306 aaKnown RBP eCLIP11.06□□□□□ -0.64
SPG7-209ENST00000564047 FAHP16930 419 aa11.06□□□□□ -0.64
SPG7-209ENST00000564047 FSTP19883 344 aa11.06□□□□□ -0.64
SPG7-209ENST00000564047 KITLGP21583 273 aa11.06□□□□□ -0.64
SPG7-209ENST00000564047 TNFSF8P32971 234 aa11.06□□□□□ -0.64
SPG7-209ENST00000564047 MPV17P39210 176 aa11.06□□□□□ -0.64
SPG7-209ENST00000564047 RANBP1P43487 201 aa11.06□□□□□ -0.64
SPG7-209ENST00000564047 FABP6P51161 128 aa11.06□□□□□ -0.64
SPG7-209ENST00000564047 PSMD7P51665 324 aa11.06□□□□□ -0.64
SPG7-209ENST00000564047 PSG7Q13046 419 aa11.06□□□□□ -0.64
SPG7-209ENST00000564047 FAM27D1Q5T7N8 215 aa11.06□□□□□ -0.64
SPG7-209ENST00000564047 OR2T2Q6IF00 324 aa11.06□□□□□ -0.64
SPG7-209ENST00000564047 FTMTQ8N4E7 242 aa11.06□□□□□ -0.64
SPG7-209ENST00000564047 OR56B2PQ8NGI1 322 aa11.06□□□□□ -0.64
SPG7-209ENST00000564047 OR5D14Q8NGL3 314 aa11.06□□□□□ -0.64
SPG7-209ENST00000564047 SYNPRQ8TBG9 265 aa11.06□□□□□ -0.64
SPG7-209ENST00000564047 PP6455Q8WZ26 134 aa11.06□□□□□ -0.64
SPG7-209ENST00000564047 HS3ST6Q96QI5 342 aa11.06□□□□□ -0.64
SPG7-209ENST00000564047 ABCB10Q9NRK6 738 aa11.06□□□□□ -0.64
SPG7-209ENST00000564047 CKLFQ9UBR5 152 aa11.06□□□□□ -0.64
SPG7-209ENST00000564047 PURGQ9UJV8 347 aaKnown RBP11.06□□□□□ -0.64
SPG7-209ENST00000564047 POU2F3Q9UKI9 436 aa11.06□□□□□ -0.64
SPG7-209ENST00000564047 MAP1AP78559 2803 aaPredicted RBP11.05□□□□□ -0.64
SPG7-209ENST00000564047 IGLV3-9A0A075B6K5 115 aa11.05□□□□□ -0.64
SPG7-209ENST00000564047 CST4P01036 141 aa11.05□□□□□ -0.64
SPG7-209ENST00000564047 IGHV3-13P01766 116 aa11.05□□□□□ -0.64
SPG7-209ENST00000564047 IGFBP3P17936 291 aaPredicted RBP11.05□□□□□ -0.64
SPG7-209ENST00000564047 SRMP19623 302 aa11.05□□□□□ -0.64
SPG7-209ENST00000564047 MYL9P24844 172 aa11.05□□□□□ -0.64
SPG7-209ENST00000564047 PTBP1P26599 531 aaKnown RBP eCLIP11.05□□□□□ -0.64
SPG7-209ENST00000564047 GNALP38405 381 aa11.05□□□□□ -0.64
SPG7-209ENST00000564047 MTNR1BP49286 362 aa11.05□□□□□ -0.64
SPG7-209ENST00000564047 PRSS12P56730 875 aa11.05□□□□□ -0.64
SPG7-209ENST00000564047 MSMPQ1L6U9 139 aa11.05□□□□□ -0.64
SPG7-209ENST00000564047 CLVS2Q5SYC1 327 aa11.05□□□□□ -0.64
SPG7-209ENST00000564047 STEAP3Q658P3 488 aa11.05□□□□□ -0.64
SPG7-209ENST00000564047 TMEM42Q69YG0 159 aa11.05□□□□□ -0.64
SPG7-209ENST00000564047 ASPHD2Q6ICH7 369 aa11.05□□□□□ -0.64
SPG7-209ENST00000564047 ZNF529Q6P280 563 aa11.05□□□□□ -0.64
SPG7-209ENST00000564047 VHLLQ6RSH7 139 aa11.05□□□□□ -0.64
SPG7-209ENST00000564047 METAP1DQ6UB28 335 aaPredicted RBP11.05□□□□□ -0.64
SPG7-209ENST00000564047 UTS2BQ765I0 119 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms