RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 C1RLQ9NZP8 487 aa17.36■□□□□ 0.37
VSX1-206ENST00000444511 DNAJB11Q9UBS4 358 aa17.36■□□□□ 0.37
VSX1-206ENST00000444511 A0A0U1RQK1 487 aa17.35■□□□□ 0.37
VSX1-206ENST00000444511 A0A1B0GVI7 797 aa17.35■□□□□ 0.37
VSX1-206ENST00000444511 ZNF850A8MQ14 1090 aa17.35■□□□□ 0.37
VSX1-206ENST00000444511 PRODHO43272 600 aa17.35■□□□□ 0.37
VSX1-206ENST00000444511 E2F6O75461 281 aa17.35■□□□□ 0.37
VSX1-206ENST00000444511 NDUFA7O95182 113 aa17.35■□□□□ 0.37
VSX1-206ENST00000444511 FAM107AO95990 144 aa17.35■□□□□ 0.37
VSX1-206ENST00000444511 HMGN1P05114 100 aa17.35■□□□□ 0.37
VSX1-206ENST00000444511 RPS7P62081 194 aaKnown RBP17.35■□□□□ 0.37
VSX1-206ENST00000444511 IKZF1Q13422 519 aa17.35■□□□□ 0.37
VSX1-206ENST00000444511 KCTD8Q6ZWB6 473 aa17.35■□□□□ 0.37
VSX1-206ENST00000444511 TMEM179BQ7Z7N9 219 aa17.35■□□□□ 0.37
VSX1-206ENST00000444511 CMTM4Q8IZR5 234 aa17.35■□□□□ 0.37
VSX1-206ENST00000444511 CANT1Q8WVQ1 401 aa17.35■□□□□ 0.37
VSX1-206ENST00000444511 THTPAQ9BU02 230 aa17.35■□□□□ 0.37
VSX1-206ENST00000444511 C1orf21Q9H246 121 aa17.35■□□□□ 0.37
VSX1-206ENST00000444511 HAO2Q9NYQ3 351 aa17.35■□□□□ 0.37
VSX1-206ENST00000444511 MEGF8Q7Z7M0 2845 aa17.35■□□□□ 0.37
VSX1-206ENST00000444511 TMEM210A6NLX4 147 aa17.34■□□□□ 0.37
VSX1-206ENST00000444511 AQP12BA6NM10 295 aa17.34■□□□□ 0.37
VSX1-206ENST00000444511 GPR37O15354 613 aa17.34■□□□□ 0.37
VSX1-206ENST00000444511 OSMP13725 252 aa17.34■□□□□ 0.37
VSX1-206ENST00000444511 HOXB6P17509 224 aaKnown RBP17.34■□□□□ 0.37
VSX1-206ENST00000444511 ACKR3P25106 362 aa17.34■□□□□ 0.37
VSX1-206ENST00000444511 RPL15P61313 204 aaKnown RBP17.34■□□□□ 0.37
VSX1-206ENST00000444511 RELBQ01201 579 aa17.34■□□□□ 0.37
VSX1-206ENST00000444511 LRRC10Q5BKY1 277 aa17.34■□□□□ 0.37
VSX1-206ENST00000444511 OLFML2AQ68BL7 652 aa17.34■□□□□ 0.37
VSX1-206ENST00000444511 STUMQ69YW2 141 aa17.34■□□□□ 0.37
VSX1-206ENST00000444511 CPOQ8IVL8 374 aa17.34■□□□□ 0.37
VSX1-206ENST00000444511 AQP12AQ8IXF9 295 aa17.34■□□□□ 0.37
VSX1-206ENST00000444511 LY6G5BQ8NDX9 201 aa17.34■□□□□ 0.37
VSX1-206ENST00000444511 OR5T2Q8NGG2 359 aa17.34■□□□□ 0.37
VSX1-206ENST00000444511 WFDC12Q8WWY7 111 aa17.34■□□□□ 0.37
VSX1-206ENST00000444511 OR5P3Q8WZ94 311 aa17.34■□□□□ 0.37
VSX1-206ENST00000444511 PIGCQ92535 297 aa17.34■□□□□ 0.37
VSX1-206ENST00000444511 DYRK2Q92630 601 aa17.34■□□□□ 0.37
VSX1-206ENST00000444511 RPL3LQ92901 407 aaKnown RBP17.34■□□□□ 0.37
VSX1-206ENST00000444511 PKP2Q99959 881 aa17.34■□□□□ 0.37
VSX1-206ENST00000444511 NIPAL2Q9H841 368 aa17.34■□□□□ 0.37
VSX1-206ENST00000444511 ZNF391Q9UJN7 358 aa17.34■□□□□ 0.37
VSX1-206ENST00000444511 FAM96BQ9Y3D0 163 aa17.34■□□□□ 0.37
VSX1-206ENST00000444511 NKX6-3A6NJ46 265 aa17.33■□□□□ 0.36
VSX1-206ENST00000444511 CST4P01036 141 aa17.33■□□□□ 0.36
VSX1-206ENST00000444511 IGHV4-59P01825 116 aa17.33■□□□□ 0.36
VSX1-206ENST00000444511 PSMA6P60900 246 aaKnown RBP17.33■□□□□ 0.36
VSX1-206ENST00000444511 SLC35D3Q5M8T2 416 aa17.33■□□□□ 0.36
VSX1-206ENST00000444511 ATPAF1Q5TC12 328 aaPredicted RBP17.33■□□□□ 0.36
VSX1-206ENST00000444511 LDLRAD3Q86YD5 345 aa17.33■□□□□ 0.36
VSX1-206ENST00000444511 OR8B12Q8NGG6 310 aa17.33■□□□□ 0.36
VSX1-206ENST00000444511 OR10Z1Q8NGY1 313 aa17.33■□□□□ 0.36
VSX1-206ENST00000444511 H1FXQ92522 213 aaKnown RBP17.33■□□□□ 0.36
VSX1-206ENST00000444511 RNF170Q96K19 258 aa17.33■□□□□ 0.36
VSX1-206ENST00000444511 DMRTB1Q96MA1 342 aa17.33■□□□□ 0.36
VSX1-206ENST00000444511 HIST1H2AAQ96QV6 131 aa17.33■□□□□ 0.36
VSX1-206ENST00000444511 TEX12Q9BXU0 123 aa17.33■□□□□ 0.36
VSX1-206ENST00000444511 SNTG1Q9NSN8 517 aa17.33■□□□□ 0.36
VSX1-206ENST00000444511 LAMP5Q9UJQ1 280 aa17.33■□□□□ 0.36
VSX1-206ENST00000444511 KLHDC2Q9Y2U9 406 aa17.33■□□□□ 0.36
VSX1-206ENST00000444511 CLPSL1A2RUU4 121 aa17.32■□□□□ 0.36
VSX1-206ENST00000444511 KCNAB3O43448 404 aa17.32■□□□□ 0.36
VSX1-206ENST00000444511 GPR137BO60478 399 aa17.32■□□□□ 0.36
VSX1-206ENST00000444511 TGM4P49221 684 aa17.32■□□□□ 0.36
VSX1-206ENST00000444511 CDK5Q00535 292 aa17.32■□□□□ 0.36
VSX1-206ENST00000444511 SRSF4Q08170 494 aaKnown RBP17.32■□□□□ 0.36
VSX1-206ENST00000444511 KRT77Q7Z794 578 aa17.32■□□□□ 0.36
VSX1-206ENST00000444511 ZDHHC23Q8IYP9 409 aa17.32■□□□□ 0.36
VSX1-206ENST00000444511 HS3ST5Q8IZT8 346 aa17.32■□□□□ 0.36
VSX1-206ENST00000444511 PIP4P2Q8N4L2 257 aa17.32■□□□□ 0.36
VSX1-206ENST00000444511 BBS1Q8NFJ9 593 aa17.32■□□□□ 0.36
VSX1-206ENST00000444511 FAM81AQ8TBF8 368 aa17.32■□□□□ 0.36
VSX1-206ENST00000444511 LYZL4Q96KX0 146 aa17.32■□□□□ 0.36
VSX1-206ENST00000444511 RAB3IPQ96QF0 476 aaPredicted RBP17.32■□□□□ 0.36
VSX1-206ENST00000444511 DCTN5Q9BTE1 182 aa17.32■□□□□ 0.36
VSX1-206ENST00000444511 DNTTIP1Q9H147 329 aa17.32■□□□□ 0.36
VSX1-206ENST00000444511 WDR13Q9H1Z4 485 aa17.32■□□□□ 0.36
VSX1-206ENST00000444511 DPAGT1Q9H3H5 408 aa17.32■□□□□ 0.36
VSX1-206ENST00000444511 SIRT7Q9NRC8 400 aa17.32■□□□□ 0.36
VSX1-206ENST00000444511 CAB39Q9Y376 341 aaPredicted RBP17.32■□□□□ 0.36
VSX1-206ENST00000444511 LRP12Q9Y561 859 aa17.32■□□□□ 0.36
VSX1-206ENST00000444511 PKD1L1Q8TDX9 2849 aa17.32■□□□□ 0.36
VSX1-206ENST00000444511 TRRAPQ9Y4A5 3859 aa17.31■□□□□ 0.36
VSX1-206ENST00000444511 AKR7A2O43488 359 aa17.31■□□□□ 0.36
VSX1-206ENST00000444511 ANXA8P13928 327 aa17.31■□□□□ 0.36
VSX1-206ENST00000444511 AMY2BP19961 511 aa17.31■□□□□ 0.36
VSX1-206ENST00000444511 PRKACGP22612 351 aa17.31■□□□□ 0.36
VSX1-206ENST00000444511 IER3P46695 156 aa17.31■□□□□ 0.36
VSX1-206ENST00000444511 BRICD5Q6PL45 260 aa17.31■□□□□ 0.36
VSX1-206ENST00000444511 MED30Q96HR3 178 aa17.31■□□□□ 0.36
VSX1-206ENST00000444511 YY1AP1Q9H869 796 aa17.31■□□□□ 0.36
VSX1-206ENST00000444511 FBP1P09467 338 aa17.3■□□□□ 0.36
VSX1-206ENST00000444511 SELLP14151 372 aa17.3■□□□□ 0.36
VSX1-206ENST00000444511 ALOX5APP20292 161 aa17.3■□□□□ 0.36
VSX1-206ENST00000444511 EEF1B2P24534 225 aaKnown RBP17.3■□□□□ 0.36
VSX1-206ENST00000444511 GUCA2AQ02747 115 aa17.3■□□□□ 0.36
VSX1-206ENST00000444511 APOFQ13790 326 aa17.3■□□□□ 0.36
VSX1-206ENST00000444511 FAM76BQ5HYJ3 339 aa17.3■□□□□ 0.36
VSX1-206ENST00000444511 TMEM236Q5W0B7 351 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms