RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 LINC00346Q8IVM7 164 aa3.29□□□□□ -1.88
HMGB3P20-201ENST00000417997 TIGD4Q8IY51 512 aa3.29□□□□□ -1.88
HMGB3P20-201ENST00000417997 ZADH2Q8N4Q0 377 aa3.29□□□□□ -1.88
HMGB3P20-201ENST00000417997 MS4A15Q8N5U1 240 aa3.29□□□□□ -1.88
HMGB3P20-201ENST00000417997 ZNF676Q8N7Q3 588 aa3.29□□□□□ -1.88
HMGB3P20-201ENST00000417997 DMBX1Q8NFW5 382 aa3.29□□□□□ -1.88
HMGB3P20-201ENST00000417997 SLC26A10Q8NG04 563 aa3.29□□□□□ -1.88
HMGB3P20-201ENST00000417997 OR6X1Q8NH79 312 aa3.29□□□□□ -1.88
HMGB3P20-201ENST00000417997 OTOSQ8NHW6 89 aa3.29□□□□□ -1.88
HMGB3P20-201ENST00000417997 NEIL3Q8TAT5 605 aa3.29□□□□□ -1.88
HMGB3P20-201ENST00000417997 DYNC2LI1Q8TCX1 351 aa3.29□□□□□ -1.88
HMGB3P20-201ENST00000417997 ZFAND2BQ8WV99 257 aa3.29□□□□□ -1.88
HMGB3P20-201ENST00000417997 TSEN15Q8WW01 171 aaKnown RBP3.29□□□□□ -1.88
HMGB3P20-201ENST00000417997 ZNRF4Q8WWF5 429 aa3.29□□□□□ -1.88
HMGB3P20-201ENST00000417997 C11orf40Q8WZ69 217 aa3.29□□□□□ -1.88
HMGB3P20-201ENST00000417997 AP3S1Q92572 193 aa3.29□□□□□ -1.88
HMGB3P20-201ENST00000417997 THRSPQ92748 146 aa3.29□□□□□ -1.88
HMGB3P20-201ENST00000417997 HAS2Q92819 552 aa3.29□□□□□ -1.88
HMGB3P20-201ENST00000417997 ABTB1Q969K4 478 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P20-201ENST00000417997 NTNG2Q96CW9 530 aa3.29□□□□□ -1.88
HMGB3P20-201ENST00000417997 SMIM19Q96E16 107 aa3.29□□□□□ -1.88
HMGB3P20-201ENST00000417997 PELI1Q96FA3 418 aa3.29□□□□□ -1.88
HMGB3P20-201ENST00000417997 OR8B4Q96RC9 309 aa3.29□□□□□ -1.88
HMGB3P20-201ENST00000417997 DDOQ99489 341 aa3.29□□□□□ -1.88
HMGB3P20-201ENST00000417997 MROQ9BYG7 248 aa3.29□□□□□ -1.88
HMGB3P20-201ENST00000417997 SLITRK2Q9H156 845 aa3.29□□□□□ -1.88
HMGB3P20-201ENST00000417997 DEFB127Q9H1M4 99 aa3.29□□□□□ -1.88
HMGB3P20-201ENST00000417997 RNF167Q9H6Y7 350 aa3.29□□□□□ -1.88
HMGB3P20-201ENST00000417997 MARCH7Q9H992 704 aa3.29□□□□□ -1.88
HMGB3P20-201ENST00000417997 HMG20AQ9NP66 347 aa3.29□□□□□ -1.88
HMGB3P20-201ENST00000417997 CENPMQ9NSP4 180 aa3.29□□□□□ -1.88
HMGB3P20-201ENST00000417997 TXNL4BQ9NX01 149 aaKnown RBP3.29□□□□□ -1.88
HMGB3P20-201ENST00000417997 EMC3Q9P0I2 261 aa3.29□□□□□ -1.88
HMGB3P20-201ENST00000417997 KIAA1456Q9P272 454 aa3.29□□□□□ -1.88
HMGB3P20-201ENST00000417997 KLHL9Q9P2J3 617 aa3.29□□□□□ -1.88
HMGB3P20-201ENST00000417997 B3GAT1Q9P2W7 334 aa3.29□□□□□ -1.88
HMGB3P20-201ENST00000417997 FBXO9Q9UK97 447 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P20-201ENST00000417997 KLHDC2Q9Y2U9 406 aa3.29□□□□□ -1.88
HMGB3P20-201ENST00000417997 FAM96BQ9Y3D0 163 aa3.29□□□□□ -1.88
HMGB3P20-201ENST00000417997 FREM3P0C091 2139 aa3.29□□□□□ -1.88
HMGB3P20-201ENST00000417997 LOC102725191A0A1B0GVB3 256 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 A0A1B0GVC2 190 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 TRIM64BA6NI03 449 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 TMEM212A6NML5 194 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 ZNF879B4DU55 563 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 CLDN25C9JDP6 229 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 ZNF587BE7ETH6 402 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 E9PI62 339 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 H0YC42 278 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 MKRN2OSH3BPM6 223 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 GPR171O14626 319 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 PDCD5O14737 125 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 MAGEB4O15481 346 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 OGG1O15527 345 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 LRRTM2O43300 516 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 PLPP2O43688 288 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 CYTIPO60759 359 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 ZNF254O75437 659 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 GATBO75879 557 aaKnown RBP3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 SULT1C4O75897 302 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 AQP8O94778 261 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 GLSO94925 669 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 MPZL1O95297 269 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 QDPRP09417 244 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 ZNF708P17019 499 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 ALOX5APP20292 161 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 MSR1P21757 451 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 CFL1P23528 166 aaKnown RBP3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 MAPK3P27361 379 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 CALRP27797 417 aaKnown RBP3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 LAP3P28838 519 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 FGF9P31371 208 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 SDC2P34741 201 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 OPRL1P41146 370 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 CRYBB2P43320 205 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 LHX2P50458 406 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 P2RY4P51582 365 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 SUCLG1P53597 346 aaKnown RBP3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 CLDN18P56856 261 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 GRB2P62993 217 aaKnown RBP3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 SIRPAP78324 504 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 H3F3AP84243 136 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 RELQ04864 619 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 DCTN2Q13561 401 aaKnown RBP3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 RBM39Q14498 530 aaKnown RBP3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 SLC17A1Q14916 467 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 RNPS1Q15287 305 aaKnown RBP3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 BCL2A1Q16548 175 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 C3AR1Q16581 482 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 SGCAQ16586 387 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 MOGQ16653 247 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 HYAL4Q2M3T9 481 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 HSD17B12Q53GQ0 312 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 YIF1BQ5BJH7 314 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 SPANXN2Q5MJ10 180 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 BCL2L15Q5TBC7 163 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 LIPNQ5VXI9 398 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 OTPQ5XKR4 325 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 DMKNQ6E0U4 476 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 ADAM5Q6NVV9 412 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms