RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 TOMM20LQ6UXN7 152 aa17.71■□□□□ 0.42
SHANK1-203ENST00000391813 OR4C5Q8NGB2 326 aa17.71■□□□□ 0.42
SHANK1-203ENST00000391813 CORO2AQ92828 525 aa17.71■□□□□ 0.42
SHANK1-203ENST00000391813 NMES1Q9C002 83 aa17.71■□□□□ 0.42
SHANK1-203ENST00000391813 GPR160Q9UJ42 338 aa17.71■□□□□ 0.42
SHANK1-203ENST00000391813 TMEM272A0A1B0GTI8 110 aa17.7■□□□□ 0.42
SHANK1-203ENST00000391813 A0A1W2PPH5 198 aa17.7■□□□□ 0.42
SHANK1-203ENST00000391813 PGA3P0DJD8 388 aa17.7■□□□□ 0.42
SHANK1-203ENST00000391813 TMEM183BQ1AE95 376 aa17.7■□□□□ 0.42
SHANK1-203ENST00000391813 H2BFWTQ7Z2G1 175 aa17.7■□□□□ 0.42
SHANK1-203ENST00000391813 RIMS4Q9H426 269 aaPredicted RBP17.7■□□□□ 0.42
SHANK1-203ENST00000391813 NPBWR1P48145 328 aa17.7■□□□□ 0.42
SHANK1-203ENST00000391813 GZMMP51124 257 aa17.7■□□□□ 0.42
SHANK1-203ENST00000391813 WDR38Q5JTN6 314 aa17.7■□□□□ 0.42
SHANK1-203ENST00000391813 LHFPL2Q6ZUX7 228 aa17.7■□□□□ 0.42
SHANK1-203ENST00000391813 TMEM37Q8WXS4 190 aa17.7■□□□□ 0.42
SHANK1-203ENST00000391813 CTDSP1Q9GZU7 261 aa17.7■□□□□ 0.42
SHANK1-203ENST00000391813 ALX4Q9H161 411 aaPredicted RBP17.7■□□□□ 0.42
SHANK1-203ENST00000391813 GPR173Q9NS66 373 aa17.7■□□□□ 0.42
SHANK1-203ENST00000391813 FBXL17Q9UF56 701 aa17.7■□□□□ 0.42
SHANK1-203ENST00000391813 GTF2H5Q6ZYL4 71 aa17.7■□□□□ 0.42
SHANK1-203ENST00000391813 KDF1Q8NAX2 398 aaPredicted RBP17.7■□□□□ 0.42
SHANK1-203ENST00000391813 REEP6Q96HR9 211 aa17.7■□□□□ 0.42
SHANK1-203ENST00000391813 EMC6Q9BV81 110 aa17.7■□□□□ 0.42
SHANK1-203ENST00000391813 RPL29P47914 159 aaKnown RBP17.7■□□□□ 0.42
SHANK1-203ENST00000391813 DEGS2Q6QHC5 323 aa17.7■□□□□ 0.42
SHANK1-203ENST00000391813 KMT5CQ86Y97 462 aa17.7■□□□□ 0.42
SHANK1-203ENST00000391813 OR51F2Q8NH61 342 aa17.7■□□□□ 0.42
SHANK1-203ENST00000391813 OBP2BQ9NPH6 170 aa17.7■□□□□ 0.42
SHANK1-203ENST00000391813 ING1Q9UK53 422 aaPredicted RBP17.7■□□□□ 0.42
SHANK1-203ENST00000391813 COL4A1P02462 1669 aa17.69■□□□□ 0.42
SHANK1-203ENST00000391813 A0A1B0GX78 115 aa17.69■□□□□ 0.42
SHANK1-203ENST00000391813 OR1D5P58170 312 aa17.69■□□□□ 0.42
SHANK1-203ENST00000391813 IL13RA2Q14627 380 aa17.69■□□□□ 0.42
SHANK1-203ENST00000391813 NCMAPQ5T1S8 102 aa17.69■□□□□ 0.42
SHANK1-203ENST00000391813 PP6455Q8WZ26 134 aa17.69■□□□□ 0.42
SHANK1-203ENST00000391813 ARRDC1-AS1Q9H2J1 176 aa17.69■□□□□ 0.42
SHANK1-203ENST00000391813 LIN7CQ9NUP9 197 aaKnown RBP17.69■□□□□ 0.42
SHANK1-203ENST00000391813 MPPED1O15442 326 aa17.69■□□□□ 0.42
SHANK1-203ENST00000391813 BHLHA9Q7RTU4 235 aa17.69■□□□□ 0.42
SHANK1-203ENST00000391813 IFI44Q8TCB0 444 aa17.69■□□□□ 0.42
SHANK1-203ENST00000391813 COLQQ9Y215 455 aaPredicted RBP17.69■□□□□ 0.42
SHANK1-203ENST00000391813 CEP290O15078 2479 aa17.69■□□□□ 0.42
SHANK1-203ENST00000391813 QSER1Q2KHR3 1735 aa17.69■□□□□ 0.42
SHANK1-203ENST00000391813 ZNF814B7Z6K7 855 aa17.69■□□□□ 0.42
SHANK1-203ENST00000391813 M0R135 149 aa17.69■□□□□ 0.42
SHANK1-203ENST00000391813 HLA-DRB3P79483 266 aa17.69■□□□□ 0.42
SHANK1-203ENST00000391813 ZNF799Q96GE5 643 aa17.69■□□□□ 0.42
SHANK1-203ENST00000391813 TBC1D29Q9UFV1 150 aa17.69■□□□□ 0.42
SHANK1-203ENST00000391813 CCKARP32238 428 aa17.68■□□□□ 0.42
SHANK1-203ENST00000391813 KRTDAPP60985 99 aa17.68■□□□□ 0.42
SHANK1-203ENST00000391813 PKIAP61925 76 aa17.68■□□□□ 0.42
SHANK1-203ENST00000391813 PPP2CBP62714 309 aa17.68■□□□□ 0.42
SHANK1-203ENST00000391813 PPP2CAP67775 309 aa17.68■□□□□ 0.42
SHANK1-203ENST00000391813 C16orf52Q8NHV5 167 aa17.68■□□□□ 0.42
SHANK1-203ENST00000391813 ARSGQ96EG1 525 aa17.68■□□□□ 0.42
SHANK1-203ENST00000391813 MS4A10Q96PG2 267 aa17.68■□□□□ 0.42
SHANK1-203ENST00000391813 MAGT1Q9H0U3 335 aa17.68■□□□□ 0.42
SHANK1-203ENST00000391813 C20orf141Q9NUB4 165 aa17.68■□□□□ 0.42
SHANK1-203ENST00000391813 XKRY2A2RUG3 117 aa17.68■□□□□ 0.42
SHANK1-203ENST00000391813 SHISA7A6NL88 538 aa17.68■□□□□ 0.42
SHANK1-203ENST00000391813 HIST1H1DP16402 221 aaKnown RBP17.68■□□□□ 0.42
SHANK1-203ENST00000391813 EEF1A2Q05639 463 aaKnown RBP17.68■□□□□ 0.42
SHANK1-203ENST00000391813 RPL7L1Q6DKI1 246 aaKnown RBP17.68■□□□□ 0.42
SHANK1-203ENST00000391813 ZNF813Q6ZN06 617 aa17.68■□□□□ 0.42
SHANK1-203ENST00000391813 UTP23Q9BRU9 249 aaKnown RBP17.68■□□□□ 0.42
SHANK1-203ENST00000391813 RSRP1Q9BUV0 290 aa17.68■□□□□ 0.42
SHANK1-203ENST00000391813 PSENENQ9NZ42 101 aa17.68■□□□□ 0.42
SHANK1-203ENST00000391813 PRAMEF25A6NGN4 478 aa17.68■□□□□ 0.42
SHANK1-203ENST00000391813 LMO7DNF2Z398 122 aa17.68■□□□□ 0.42
SHANK1-203ENST00000391813 GLB1P16278 677 aa17.68■□□□□ 0.42
SHANK1-203ENST00000391813 GSK3AP49840 483 aa17.68■□□□□ 0.42
SHANK1-203ENST00000391813 EMDP50402 254 aa17.68■□□□□ 0.42
SHANK1-203ENST00000391813 MORN4Q8NDC4 146 aa17.68■□□□□ 0.42
SHANK1-203ENST00000391813 PIK3IP1Q96FE7 263 aa17.68■□□□□ 0.42
SHANK1-203ENST00000391813 PPIL1Q9Y3C6 166 aa17.68■□□□□ 0.42
SHANK1-203ENST00000391813 B4DEV8 164 aa17.68■□□□□ 0.42
SHANK1-203ENST00000391813 FFAR1O14842 300 aa17.68■□□□□ 0.42
SHANK1-203ENST00000391813 IGF2P01344 180 aa17.68■□□□□ 0.42
SHANK1-203ENST00000391813 S100A7P31151 101 aa17.68■□□□□ 0.42
SHANK1-203ENST00000391813 SIGLEC14Q08ET2 396 aa17.68■□□□□ 0.42
SHANK1-203ENST00000391813 SOX7Q9BT81 388 aa17.68■□□□□ 0.42
SHANK1-203ENST00000391813 H0Y8X5 98 aa17.67■□□□□ 0.42
SHANK1-203ENST00000391813 NXPH2O95156 264 aa17.67■□□□□ 0.42
SHANK1-203ENST00000391813 GDF1P27539 372 aa17.67■□□□□ 0.42
SHANK1-203ENST00000391813 TMEM241Q24JQ0 296 aa17.67■□□□□ 0.42
SHANK1-203ENST00000391813 Q6ZS52 159 aa17.67■□□□□ 0.42
SHANK1-203ENST00000391813 SIRT7Q9NRC8 400 aa17.67■□□□□ 0.42
SHANK1-203ENST00000391813 B3GAT1Q9P2W7 334 aa17.67■□□□□ 0.42
SHANK1-203ENST00000391813 LRP12Q9Y561 859 aa17.67■□□□□ 0.42
SHANK1-203ENST00000391813 MPGP29372 298 aa17.67■□□□□ 0.42
SHANK1-203ENST00000391813 CD200P41217 278 aa17.67■□□□□ 0.42
SHANK1-203ENST00000391813 SLC10A1Q14973 349 aa17.67■□□□□ 0.42
SHANK1-203ENST00000391813 TMEM91Q6ZNR0 172 aa17.67■□□□□ 0.42
SHANK1-203ENST00000391813 SLC35G3Q8N808 338 aa17.67■□□□□ 0.42
SHANK1-203ENST00000391813 CHRDL1Q9BU40 450 aa17.67■□□□□ 0.42
SHANK1-203ENST00000391813 CACFD1Q9UGQ2 172 aa17.67■□□□□ 0.42
SHANK1-203ENST00000391813 NAAAQ02083 359 aa17.67■□□□□ 0.42
SHANK1-203ENST00000391813 CLEC12BQ2HXU8 276 aa17.67■□□□□ 0.42
SHANK1-203ENST00000391813 FAM103A1Q9BTL3 118 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms