RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 TSPAN5P62079 268 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 SNRPD2P62316 118 aaKnown RBP9.07□□□□□ -0.96
COL5A1-202ENST00000371820 SLC35A1P78382 337 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 ZP4Q12836 540 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 MADCAM1Q13477 382 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 SLC17A1Q14916 467 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 OPCMLQ14982 345 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 ZMYND11Q15326 602 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 RAB11BQ15907 218 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 TEX30Q5JUR7 227 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 SFRP5Q5T4F7 317 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 TMEM244Q5VVB8 128 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 SFRP4Q6FHJ7 346 aaPredicted RBP9.07□□□□□ -0.96
COL5A1-202ENST00000371820 ABLIM2Q6H8Q1 611 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 LPCAT3Q6P1A2 487 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 Q6ZT83 130 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 NLRC3Q7RTR2 1065 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 PRSS45Q7RTY3 260 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 NUFIP2Q7Z417 695 aaKnown RBP9.07□□□□□ -0.96
COL5A1-202ENST00000371820 BIVMQ86UB2 503 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 LRRTM1Q86UE6 522 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 ADGRG3Q86Y34 549 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 WFDC8Q8IUA0 241 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 ZNF100Q8IYN0 542 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 GABRG1Q8N1C3 465 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 TMEM229BQ8NBD8 167 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 OR6N1Q8NGY5 312 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 OTOSQ8NHW6 89 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 THEM6Q8WUY1 208 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 MCHR2Q969V1 340 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 ZNF524Q96C55 264 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 OR8B4Q96RC9 309 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 TXNIPQ9H3M7 391 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 FRRS1LQ9P0K9 344 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 MGAT4CQ9UBM8 478 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 MRM2Q9UI43 246 aaKnown RBP9.07□□□□□ -0.96
COL5A1-202ENST00000371820 ZNF346Q9UL40 294 aaKnown RBP9.07□□□□□ -0.96
COL5A1-202ENST00000371820 COPS3Q9UNS2 423 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 ADAM18Q9Y3Q7 739 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 IGKV1D-42A0A075B6H8 117 aa9.06□□□□□ -0.96
COL5A1-202ENST00000371820 IGKV3D-15A0A087WSY6 115 aa9.06□□□□□ -0.96
COL5A1-202ENST00000371820 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.06□□□□□ -0.96
COL5A1-202ENST00000371820 A0A1W2PPK0 400 aa9.06□□□□□ -0.96
COL5A1-202ENST00000371820 ACOD1A6NK06 481 aa9.06□□□□□ -0.96
COL5A1-202ENST00000371820 KRBOX1C9JBD0 128 aa9.06□□□□□ -0.96
COL5A1-202ENST00000371820 RRASP10301 218 aa9.06□□□□□ -0.96
COL5A1-202ENST00000371820 ZNF823P16415 610 aa9.06□□□□□ -0.96
COL5A1-202ENST00000371820 CDK2P24941 298 aa9.06□□□□□ -0.96
COL5A1-202ENST00000371820 RPL18Q07020 188 aaKnown RBP9.06□□□□□ -0.96
COL5A1-202ENST00000371820 PUDPQ08623 228 aa9.06□□□□□ -0.96
COL5A1-202ENST00000371820 MEF2DQ14814 521 aa9.06□□□□□ -0.96
COL5A1-202ENST00000371820 ACKR1Q16570 336 aa9.06□□□□□ -0.96
COL5A1-202ENST00000371820 LIN54Q6MZP7 749 aa9.06□□□□□ -0.96
COL5A1-202ENST00000371820 SEZ6L2Q6UXD5 910 aa9.06□□□□□ -0.96
COL5A1-202ENST00000371820 CXorf67Q86X51 503 aaPredicted RBP9.06□□□□□ -0.96
COL5A1-202ENST00000371820 FTMTQ8N4E7 242 aa9.06□□□□□ -0.96
COL5A1-202ENST00000371820 NKAIN3Q8N8D7 197 aa9.06□□□□□ -0.96
COL5A1-202ENST00000371820 OR51L1Q8NGJ5 315 aa9.06□□□□□ -0.96
COL5A1-202ENST00000371820 OR6N2Q8NGY6 317 aa9.06□□□□□ -0.96
COL5A1-202ENST00000371820 HSD17B8Q92506 261 aa9.06□□□□□ -0.96
COL5A1-202ENST00000371820 RASD2Q96D21 266 aa9.06□□□□□ -0.96
COL5A1-202ENST00000371820 SLC25A38Q96DW6 304 aa9.06□□□□□ -0.96
COL5A1-202ENST00000371820 C18orf12Q96KH6 178 aa9.06□□□□□ -0.96
COL5A1-202ENST00000371820 C4orf45Q96LM5 186 aa9.06□□□□□ -0.96
COL5A1-202ENST00000371820 DPCDQ9BVM2 203 aaPredicted RBP9.06□□□□□ -0.96
COL5A1-202ENST00000371820 ESRP2Q9H6T0 727 aaKnown RBP9.06□□□□□ -0.96
COL5A1-202ENST00000371820 METTL17Q9H7H0 456 aaPredicted RBP9.06□□□□□ -0.96
COL5A1-202ENST00000371820 UBTD1Q9HAC8 227 aa9.06□□□□□ -0.96
COL5A1-202ENST00000371820 NKIRAS2Q9NYR9 191 aa9.06□□□□□ -0.96
COL5A1-202ENST00000371820 VSX1Q9NZR4 365 aaPredicted RBP9.06□□□□□ -0.96
COL5A1-202ENST00000371820 PFDN2Q9UHV9 154 aa9.06□□□□□ -0.96
COL5A1-202ENST00000371820 B9D1Q9UPM9 204 aa9.06□□□□□ -0.96
COL5A1-202ENST00000371820 DHDHQ9UQ10 334 aa9.06□□□□□ -0.96
COL5A1-202ENST00000371820 NOSIPQ9Y314 301 aaKnown RBP9.06□□□□□ -0.96
COL5A1-202ENST00000371820 A0A0D9SG52 128 aa9.05□□□□□ -0.96
COL5A1-202ENST00000371820 PLSCR5A0PG75 271 aa9.05□□□□□ -0.96
COL5A1-202ENST00000371820 GGT3PA6NGU5 568 aa9.05□□□□□ -0.96
COL5A1-202ENST00000371820 A6NIN4 97 aa9.05□□□□□ -0.96
COL5A1-202ENST00000371820 ARPC1BO15143 372 aaKnown RBP9.05□□□□□ -0.96
COL5A1-202ENST00000371820 BET1O15155 118 aa9.05□□□□□ -0.96
COL5A1-202ENST00000371820 SMPD2O60906 423 aa9.05□□□□□ -0.96
COL5A1-202ENST00000371820 ADAM11O75078 769 aa9.05□□□□□ -0.96
COL5A1-202ENST00000371820 MRPL33O75394 65 aaKnown RBP9.05□□□□□ -0.96
COL5A1-202ENST00000371820 RPP14O95059 124 aaKnown RBP9.05□□□□□ -0.96
COL5A1-202ENST00000371820 AHSA1O95433 338 aa9.05□□□□□ -0.96
COL5A1-202ENST00000371820 ABHD16AO95870 558 aa9.05□□□□□ -0.96
COL5A1-202ENST00000371820 BGLAPP02818 100 aa9.05□□□□□ -0.96
COL5A1-202ENST00000371820 ISG15P05161 165 aa9.05□□□□□ -0.96
COL5A1-202ENST00000371820 THBDP07204 575 aa9.05□□□□□ -0.96
COL5A1-202ENST00000371820 OR8G3PP0DMU2 310 aa9.05□□□□□ -0.96
COL5A1-202ENST00000371820 CXCL3P19876 107 aa9.05□□□□□ -0.96
COL5A1-202ENST00000371820 FSTP19883 344 aa9.05□□□□□ -0.96
COL5A1-202ENST00000371820 RAB6AP20340 208 aa9.05□□□□□ -0.96
COL5A1-202ENST00000371820 S100A11P31949 105 aa9.05□□□□□ -0.96
COL5A1-202ENST00000371820 NANOS3P60323 173 aaKnown RBP9.05□□□□□ -0.96
COL5A1-202ENST00000371820 GLO1Q04760 184 aa9.05□□□□□ -0.96
COL5A1-202ENST00000371820 SHEQ5VZ18 495 aa9.05□□□□□ -0.96
COL5A1-202ENST00000371820 RFPL4BQ6ZWI9 263 aa9.05□□□□□ -0.96
COL5A1-202ENST00000371820 RHOUQ7L0Q8 258 aa9.05□□□□□ -0.96
COL5A1-202ENST00000371820 BHLHA15Q7RTS1 189 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms