RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 C11orf42Q8N5U0 333 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 ZNF383Q8NA42 475 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 TNFRSF14Q92956 283 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 ADTRPQ96IZ2 230 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 EGLN2Q96KS0 407 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 NDUFAF3Q9BU61 184 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 RAB33BQ9H082 229 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 THYN1Q9P016 225 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 JKAMPQ9P055 326 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 MCTS1Q9ULC4 181 aaKnown RBP4.4□□□□□ -1.7
CSMD3-201ENST00000297405 OR8B8Q15620 311 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 C21orf62-AS1Q17RA5 79 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 SLC5A12Q1EHB4 618 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 ODF4Q2M2E3 257 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 SLC25A30Q5SVS4 291 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 NPSR1Q6W5P4 371 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 SECTM1Q8WVN6 248 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 MEGF10Q96KG7 1140 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 GALR2O43603 387 aaPredicted RBP4.4□□□□□ -1.7
CSMD3-201ENST00000297405 SLCO2B1O94956 709 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 LGALS2P05162 132 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 DLX1P56177 255 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 DUSP8Q13202 625 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 RTP2Q5QGT7 225 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 POMZP3Q6PJE2 187 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 ZNF595Q8IYB9 648 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 C1orf127Q8N9H9 656 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 OR2I1PQ8NGU4 316 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 OR10AG1Q8NH19 301 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 IGSF21Q96ID5 467 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 OVOL2Q9BRP0 275 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 TPSD1Q9BZJ3 242 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 LINC00597Q9H2U6 94 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 LSM2Q9Y333 95 aaKnown RBP4.4□□□□□ -1.7
CSMD3-201ENST00000297405 FKBP1BP68106 108 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 SLAMF6Q96DU3 332 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 SELENOIQ9C0D9 397 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 SLC52A3Q9NQ40 469 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 FLRT3Q9NZU0 649 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 RCC2Q9P258 522 aaKnown RBP4.4□□□□□ -1.7
CSMD3-201ENST00000297405 GPR34Q9UPC5 381 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 GPR52Q9Y2T5 361 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 A0A0B4J293 547 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 CLEC18AA5D8T8 446 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 VENTXO95231 258 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 CYB5R3P00387 301 aaPredicted RBP4.4□□□□□ -1.7
CSMD3-201ENST00000297405 IL17AQ16552 155 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 AWAT1Q58HT5 328 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 C9orf62Q8N4C0 152 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 CLEC18CQ8NCF0 446 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 MOB3AQ96BX8 217 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 SHDQ96IW2 340 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 ICAM5Q9UMF0 924 aa4.4□□□□□ -1.7
CSMD3-201ENST00000297405 ROBO2Q9HCK4 1378 aa4.4□□□□□ -1.71
CSMD3-201ENST00000297405 HBZP02008 142 aa4.4□□□□□ -1.71
CSMD3-201ENST00000297405 KIR2DL3P43628 341 aa4.4□□□□□ -1.71
CSMD3-201ENST00000297405 DUSP5Q16690 384 aa4.4□□□□□ -1.71
CSMD3-201ENST00000297405 LHFPL2Q6ZUX7 228 aa4.4□□□□□ -1.71
CSMD3-201ENST00000297405 TMEM37Q8WXS4 190 aa4.4□□□□□ -1.71
CSMD3-201ENST00000297405 DEFB129Q9H1M3 183 aa4.4□□□□□ -1.71
CSMD3-201ENST00000297405 OPN4Q9UHM6 478 aa4.4□□□□□ -1.71
CSMD3-201ENST00000297405 GPR37O15354 613 aa4.4□□□□□ -1.71
CSMD3-201ENST00000297405 HYAL3O43820 417 aaPredicted RBP4.4□□□□□ -1.71
CSMD3-201ENST00000297405 MPZL1O95297 269 aa4.4□□□□□ -1.71
CSMD3-201ENST00000297405 NID1P14543 1247 aa4.4□□□□□ -1.71
CSMD3-201ENST00000297405 TBXA2RP21731 343 aa4.4□□□□□ -1.71
CSMD3-201ENST00000297405 COMPP49747 757 aaPredicted RBP4.4□□□□□ -1.71
CSMD3-201ENST00000297405 GNG10P50151 68 aa4.4□□□□□ -1.71
CSMD3-201ENST00000297405 CLDN15P56746 228 aa4.4□□□□□ -1.71
CSMD3-201ENST00000297405 DHRS7BQ6IAN0 325 aaPredicted RBP4.4□□□□□ -1.71
CSMD3-201ENST00000297405 ATOH1Q92858 354 aaPredicted RBP4.4□□□□□ -1.71
CSMD3-201ENST00000297405 TAAR1Q96RJ0 339 aa4.4□□□□□ -1.71
CSMD3-201ENST00000297405 VN1R3Q9BXE9 311 aa4.4□□□□□ -1.71
CSMD3-201ENST00000297405 IKZF4Q9H2S9 585 aa4.4□□□□□ -1.71
CSMD3-201ENST00000297405 MYOZ1Q9NP98 299 aaPredicted RBP4.4□□□□□ -1.71
CSMD3-201ENST00000297405 ACOT8O14734 319 aa4.4□□□□□ -1.71
CSMD3-201ENST00000297405 OR7C1O76099 320 aaPredicted RBP4.4□□□□□ -1.71
CSMD3-201ENST00000297405 SMIM13P0DJ93 91 aa4.4□□□□□ -1.71
CSMD3-201ENST00000297405 CDC34P49427 236 aaPredicted RBP4.4□□□□□ -1.71
CSMD3-201ENST00000297405 PRLHRP49683 370 aa4.4□□□□□ -1.71
CSMD3-201ENST00000297405 PIGFQ07326 219 aa4.4□□□□□ -1.71
CSMD3-201ENST00000297405 ENTPD8Q5MY95 495 aa4.4□□□□□ -1.71
CSMD3-201ENST00000297405 TMEM217Q8N7C4 229 aa4.4□□□□□ -1.71
CSMD3-201ENST00000297405 MYOZ3Q8TDC0 251 aa4.4□□□□□ -1.71
CSMD3-201ENST00000297405 OR6C1Q96RD1 312 aa4.4□□□□□ -1.71
CSMD3-201ENST00000297405 ZNF430Q9H8G1 570 aaPredicted RBP4.4□□□□□ -1.71
CSMD3-201ENST00000297405 CNTD2Q9H8S5 307 aa4.4□□□□□ -1.71
CSMD3-201ENST00000297405 ASCL3Q9NQ33 180 aa4.4□□□□□ -1.71
CSMD3-201ENST00000297405 IL17BQ9UHF5 180 aa4.4□□□□□ -1.71
CSMD3-201ENST00000297405 PKD1L2Q7Z442 2459 aa4.4□□□□□ -1.71
CSMD3-201ENST00000297405 ZNF732B4DXR9 585 aa4.4□□□□□ -1.71
CSMD3-201ENST00000297405 TMX2-CTNND1H3BSU7 103 aa4.4□□□□□ -1.71
CSMD3-201ENST00000297405 PLPP2O43688 288 aa4.4□□□□□ -1.71
CSMD3-201ENST00000297405 CD1CP29017 333 aa4.4□□□□□ -1.71
CSMD3-201ENST00000297405 OTX1P32242 354 aaPredicted RBP4.4□□□□□ -1.71
CSMD3-201ENST00000297405 P2RY1P47900 373 aa4.4□□□□□ -1.71
CSMD3-201ENST00000297405 PPP2CBP62714 309 aa4.4□□□□□ -1.71
CSMD3-201ENST00000297405 NCMAPQ5T1S8 102 aa4.4□□□□□ -1.71
CSMD3-201ENST00000297405 OR8G2PQ6IF36 304 aa4.4□□□□□ -1.71
CSMD3-201ENST00000297405 CALHM3Q86XJ0 350 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms