RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 NQO2P16083 231 aa11.8□□□□□ -0.52
TNFRSF21-201ENST00000296861 RAB30Q15771 203 aa11.8□□□□□ -0.52
TNFRSF21-201ENST00000296861 ANKRD55Q3KP44 614 aa11.8□□□□□ -0.52
TNFRSF21-201ENST00000296861 EIF5AL1Q6IS14 154 aaKnown RBP11.8□□□□□ -0.52
TNFRSF21-201ENST00000296861 C1QL2Q7Z5L3 287 aa11.8□□□□□ -0.52
TNFRSF21-201ENST00000296861 CLCC1Q96S66 551 aa11.8□□□□□ -0.52
TNFRSF21-201ENST00000296861 MAGT1Q9H0U3 335 aa11.8□□□□□ -0.52
TNFRSF21-201ENST00000296861 OR51B6Q9H340 312 aa11.8□□□□□ -0.52
TNFRSF21-201ENST00000296861 LMAN1LQ9HAT1 526 aa11.8□□□□□ -0.52
TNFRSF21-201ENST00000296861 FLVCR1Q9Y5Y0 555 aa11.8□□□□□ -0.52
TNFRSF21-201ENST00000296861 RNASEK-C17orf49H0YIS7 233 aa11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 ZNF217O75362 1048 aa11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 OR2J2O76002 312 aa11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 DUS4LO95620 317 aaKnown RBP11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 ZNF735P0CB33 412 aa11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 RFC3P40938 356 aa11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 LPCAT3Q6P1A2 487 aa11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 PGAP1Q75T13 922 aa11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 OR10G3Q8NGC4 313 aa11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 KCNG3Q8TAE7 436 aa11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 ZNF721Q8TF20 911 aa11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 UTP23Q9BRU9 249 aaKnown RBP11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 PCDH15Q96QU1 1955 aa11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 C5orf63A6NC05 138 aa11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 A6NIZ1 184 aa11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 PRR19A6NJB7 356 aa11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 ALG1L2C9J202 215 aa11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 LINC01387J3KSC0 135 aa11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 EIF3GO75821 320 aaKnown RBP eCLIP11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 CD1AP06126 327 aa11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 MTCP1P56278 107 aa11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 RAP1BP61224 184 aa11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 RAP1AP62834 184 aa11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 RNF4P78317 190 aa11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 DMWDQ09019 674 aa11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 HFEQ30201 348 aa11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 SGPP2Q8IWX5 399 aa11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 FAM24BQ8N5W8 94 aa11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 NKAIN3Q8N8D7 197 aa11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 OR8B12Q8NGG6 310 aa11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 HOXB13Q92826 284 aaPredicted RBP11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 DEFB126Q9BYW3 111 aa11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 CHST11Q9NPF2 352 aa11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 FREM2Q5SZK8 3169 aa11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 LTBP2Q14767 1821 aa11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 TRBV23-1A0A0A0MS06 115 aa11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 OR5H15A6NDH6 313 aa11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 A6NLC8 198 aa11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 IGHG1P01857 330 aa11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 LCATP04180 440 aa11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 ADCYAP1P18509 176 aa11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 RPL12P30050 165 aaKnown RBP11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 HSD11B2P80365 405 aa11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 MISPQ8IVT2 679 aa11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 TCEAL3Q969E4 200 aa11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 G6PC2Q9NQR9 355 aa11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 CLDN16Q9Y5I7 305 aa11.79□□□□□ -0.52
TNFRSF21-201ENST00000296861 A0A1W2PPC4 97 aa11.78□□□□□ -0.52
TNFRSF21-201ENST00000296861 ZNF44P15621 663 aa11.78□□□□□ -0.52
TNFRSF21-201ENST00000296861 PTGFRP43088 359 aa11.78□□□□□ -0.52
TNFRSF21-201ENST00000296861 LPAR6P43657 344 aa11.78□□□□□ -0.52
TNFRSF21-201ENST00000296861 RPS10P46783 165 aaKnown RBP11.78□□□□□ -0.52
TNFRSF21-201ENST00000296861 RSU1Q15404 277 aa11.78□□□□□ -0.52
TNFRSF21-201ENST00000296861 ISXQ2M1V0 245 aa11.78□□□□□ -0.52
TNFRSF21-201ENST00000296861 PAQR4Q8N4S7 273 aaPredicted RBP11.78□□□□□ -0.52
TNFRSF21-201ENST00000296861 OR8U1Q8NH10 309 aa11.78□□□□□ -0.52
TNFRSF21-201ENST00000296861 SLC39A7Q92504 469 aa11.78□□□□□ -0.52
TNFRSF21-201ENST00000296861 C5orf66Q9H5L9 145 aa11.78□□□□□ -0.52
TNFRSF21-201ENST00000296861 FSCN3Q9NQT6 498 aa11.78□□□□□ -0.52
TNFRSF21-201ENST00000296861 CLEC1BQ9P126 229 aa11.78□□□□□ -0.52
TNFRSF21-201ENST00000296861 PIGLQ9Y2B2 252 aa11.78□□□□□ -0.52
TNFRSF21-201ENST00000296861 MMP24Q9Y5R2 645 aa11.78□□□□□ -0.52
TNFRSF21-201ENST00000296861 HS3ST3A1Q9Y663 406 aa11.78□□□□□ -0.52
TNFRSF21-201ENST00000296861 EP300Q09472 2414 aaPredicted RBP11.78□□□□□ -0.52
TNFRSF21-201ENST00000296861 RAD51DO75771 328 aa11.78□□□□□ -0.52
TNFRSF21-201ENST00000296861 PNLIPRP2P54317 469 aa11.78□□□□□ -0.52
TNFRSF21-201ENST00000296861 F2RL1P55085 397 aa11.78□□□□□ -0.52
TNFRSF21-201ENST00000296861 CDCA3Q99618 268 aaPredicted RBP11.78□□□□□ -0.52
TNFRSF21-201ENST00000296861 FAAP24Q9BTP7 215 aa11.78□□□□□ -0.52
TNFRSF21-201ENST00000296861 ADAM19Q9H013 955 aa11.78□□□□□ -0.52
TNFRSF21-201ENST00000296861 ALX4Q9H161 411 aaPredicted RBP11.78□□□□□ -0.52
TNFRSF21-201ENST00000296861 ZNF442Q9H7R0 627 aa11.78□□□□□ -0.52
TNFRSF21-201ENST00000296861 LANCL2Q9NS86 450 aa11.78□□□□□ -0.52
TNFRSF21-201ENST00000296861 FBXL17Q9UF56 701 aa11.78□□□□□ -0.52
TNFRSF21-201ENST00000296861 MMP17Q9ULZ9 603 aa11.78□□□□□ -0.52
TNFRSF21-201ENST00000296861 RAB19A4D1S5 217 aa11.78□□□□□ -0.52
TNFRSF21-201ENST00000296861 MS4A18H0YCH9 400 aa11.78□□□□□ -0.52
TNFRSF21-201ENST00000296861 MBTPS2O43462 519 aa11.78□□□□□ -0.52
TNFRSF21-201ENST00000296861 HIST1H1DP16402 221 aaKnown RBP11.78□□□□□ -0.52
TNFRSF21-201ENST00000296861 EPHA1P21709 976 aa11.78□□□□□ -0.52
TNFRSF21-201ENST00000296861 PJVKQ0ZLH3 352 aa11.78□□□□□ -0.52
TNFRSF21-201ENST00000296861 MS4A18Q3C1V0 323 aa11.78□□□□□ -0.52
TNFRSF21-201ENST00000296861 PLAC9Q5JTB6 97 aa11.78□□□□□ -0.52
TNFRSF21-201ENST00000296861 UQCC3Q6UW78 93 aa11.78□□□□□ -0.52
TNFRSF21-201ENST00000296861 OR6C1Q96RD1 312 aa11.78□□□□□ -0.52
TNFRSF21-201ENST00000296861 RBM7Q9Y580 266 aaKnown RBP11.78□□□□□ -0.52
TNFRSF21-201ENST00000296861 KIAA2026Q5HYC2 2103 aa11.78□□□□□ -0.52
TNFRSF21-201ENST00000296861 TLX3O43711 291 aaPredicted RBP11.77□□□□□ -0.52
TNFRSF21-201ENST00000296861 EIF4E2O60573 245 aaKnown RBP11.77□□□□□ -0.52
TNFRSF21-201ENST00000296861 TRAPPC6AO75865 159 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms