RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 TSEN15Q8WW01 171 aaKnown RBP13.95□□□□□ -0.18
CTDSP1-201ENST00000273062 FAHD2AQ96GK7 314 aa13.95□□□□□ -0.18
CTDSP1-201ENST00000273062 IKZF2Q9UKS7 526 aa13.95□□□□□ -0.18
CTDSP1-201ENST00000273062 GAB2Q9UQC2 676 aa13.95□□□□□ -0.18
CTDSP1-201ENST00000273062 WDR45Q9Y484 360 aa13.95□□□□□ -0.18
CTDSP1-201ENST00000273062 METTL12A8MUP2 240 aa13.95□□□□□ -0.18
CTDSP1-201ENST00000273062 SOX1O00570 391 aaPredicted RBP13.95□□□□□ -0.18
CTDSP1-201ENST00000273062 GMFGO60234 142 aa13.95□□□□□ -0.18
CTDSP1-201ENST00000273062 CRTAPO75718 401 aaPredicted RBP13.95□□□□□ -0.18
CTDSP1-201ENST00000273062 BRS3P32247 399 aa13.95□□□□□ -0.18
CTDSP1-201ENST00000273062 SSR2P43308 183 aa13.95□□□□□ -0.18
CTDSP1-201ENST00000273062 PLAURQ03405 335 aa13.95□□□□□ -0.18
CTDSP1-201ENST00000273062 HIKESHIQ53FT3 197 aa13.95□□□□□ -0.18
CTDSP1-201ENST00000273062 LINC01590Q5TEZ4 76 aa13.95□□□□□ -0.18
CTDSP1-201ENST00000273062 TMEM64Q6YI46 380 aa13.95□□□□□ -0.18
CTDSP1-201ENST00000273062 TMEM156Q8N614 296 aa13.95□□□□□ -0.18
CTDSP1-201ENST00000273062 COMMD1Q8N668 190 aa13.95□□□□□ -0.18
CTDSP1-201ENST00000273062 WFDC1Q9HC57 220 aa13.95□□□□□ -0.18
CTDSP1-201ENST00000273062 TBC1D29Q9UFV1 150 aa13.95□□□□□ -0.18
CTDSP1-201ENST00000273062 POLR3KQ9Y2Y1 108 aaPredicted RBP13.95□□□□□ -0.18
CTDSP1-201ENST00000273062 PRR19A6NJB7 356 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 B4E171 279 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 JTBO76095 146 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 AKT2P31751 481 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 GLIPR1P48060 266 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 PPM1FP49593 454 aaPredicted RBP13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 SLC37A1P57057 533 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 P2RY6Q15077 328 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 RCC1LQ96I51 464 aaKnown RBP13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 TIMM29Q9BSF4 260 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 OR11A1Q9GZK7 315 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 PCBD2Q9H0N5 130 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 PARD6AQ9NPB6 346 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 A0A0A6YYD5 115 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 A0A1W2PR48 441 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 EPHA1P21709 976 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 APOBEC1P41238 236 aaKnown RBP13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 IL15RAQ13261 267 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 PCK2Q16822 640 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 MFSD12Q6NUT3 480 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 FAM220AQ7Z4H9 259 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 OR10A7Q8NGE5 316 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 OR56A1Q8NGH5 318 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 OR51A2Q8NGJ7 313 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 OR4X1Q8NH49 305 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 SVIPQ8NHG7 77 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 TSACCQ96A04 125 aaPredicted RBP13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 DCBLD2Q96PD2 775 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 CMKLR1Q99788 373 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 ADAP2Q9NPF8 381 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 LUZP4Q9P127 313 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 CHD3Q12873 2000 aaKnown RBP13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 A0A087WWC5 75 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 ERI3O43414 337 aaKnown RBP13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 SCGNO76038 276 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 CTHP32929 405 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 TNFRSF4P43489 277 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 DCAF7P61962 342 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 GAS6Q14393 721 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 LRRC69Q6ZNQ3 347 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 GALNTL5Q7Z4T8 443 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 MDGA2Q7Z553 956 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 ZNF283Q8N7M2 679 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 CYB561D1Q8N8Q1 229 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 OR2L3Q8NG85 312 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 OR1P1Q8NH06 330 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 ADAMTS15Q8TE58 950 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 OR1E3Q8WZA6 343 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 CCDC74BQ96LY2 380 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 GABRG3Q99928 467 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 ABHD14AQ9BUJ0 271 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 PBDC1Q9BVG4 233 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 RAB18Q9NP72 206 aa13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 MRPL22Q9NWU5 206 aaKnown RBP13.94□□□□□ -0.18
CTDSP1-201ENST00000273062 PRSS38A1L453 326 aa13.93□□□□□ -0.18
CTDSP1-201ENST00000273062 DCDC2BA2VCK2 349 aa13.93□□□□□ -0.18
CTDSP1-201ENST00000273062 TLCD2A6NGC4 264 aa13.93□□□□□ -0.18
CTDSP1-201ENST00000273062 GPR89AB7ZAQ6 455 aa13.93□□□□□ -0.18
CTDSP1-201ENST00000273062 NXPH2O95156 264 aa13.93□□□□□ -0.18
CTDSP1-201ENST00000273062 TK1P04183 234 aa13.93□□□□□ -0.18
CTDSP1-201ENST00000273062 GPR89BP0CG08 455 aa13.93□□□□□ -0.18
CTDSP1-201ENST00000273062 HNF1AP20823 631 aa13.93□□□□□ -0.18
CTDSP1-201ENST00000273062 ELLP55199 621 aaPredicted RBP13.93□□□□□ -0.18
CTDSP1-201ENST00000273062 COL10A1Q03692 680 aa13.93□□□□□ -0.18
CTDSP1-201ENST00000273062 ZNF429Q86V71 674 aa13.93□□□□□ -0.18
CTDSP1-201ENST00000273062 ZNF595Q8IYB9 648 aa13.93□□□□□ -0.18
CTDSP1-201ENST00000273062 OR2I1PQ8NGU4 316 aa13.93□□□□□ -0.18
CTDSP1-201ENST00000273062 FAM213BQ8TBF2 198 aa13.93□□□□□ -0.18
CTDSP1-201ENST00000273062 ALG12Q9BV10 488 aa13.93□□□□□ -0.18
CTDSP1-201ENST00000273062 RXFP3Q9NSD7 469 aa13.93□□□□□ -0.18
CTDSP1-201ENST00000273062 GCGP01275 180 aa13.93□□□□□ -0.18
CTDSP1-201ENST00000273062 GAPDHP04406 335 aaKnown RBP13.93□□□□□ -0.18
CTDSP1-201ENST00000273062 FGF5P12034 268 aa13.93□□□□□ -0.18
CTDSP1-201ENST00000273062 TMEM128Q5BJH2 165 aa13.93□□□□□ -0.18
CTDSP1-201ENST00000273062 LCN10Q6JVE6 187 aa13.93□□□□□ -0.18
CTDSP1-201ENST00000273062 ZNF880Q6PDB4 577 aa13.93□□□□□ -0.18
CTDSP1-201ENST00000273062 FAM185AQ8N0U4 392 aa13.93□□□□□ -0.18
CTDSP1-201ENST00000273062 SHISA5Q8N114 240 aa13.93□□□□□ -0.18
CTDSP1-201ENST00000273062 C2orf50Q96LR7 162 aa13.93□□□□□ -0.18
CTDSP1-201ENST00000273062 ADAD1Q96M93 576 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms