RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 ZNF799Q96GE5 643 aa17.4■□□□□ 0.38
SUDS3-204ENST00000543473 SLC35B3Q9H1N7 401 aa17.4■□□□□ 0.38
SUDS3-204ENST00000543473 LAMP3Q9UQV4 416 aa17.4■□□□□ 0.38
SUDS3-204ENST00000543473 SLCO1B1Q9Y6L6 691 aa17.4■□□□□ 0.38
SUDS3-204ENST00000543473 A0A1W2PPQ1 181 aa17.4■□□□□ 0.38
SUDS3-204ENST00000543473 BTBD17A6NE02 478 aa17.4■□□□□ 0.38
SUDS3-204ENST00000543473 OR2W5A6NFC9 320 aa17.4■□□□□ 0.38
SUDS3-204ENST00000543473 SMIM6P0DI80 62 aa17.4■□□□□ 0.38
SUDS3-204ENST00000543473 RFC3P40938 356 aa17.4■□□□□ 0.38
SUDS3-204ENST00000543473 ZNF429Q86V71 674 aa17.4■□□□□ 0.38
SUDS3-204ENST00000543473 PPIAP62937 165 aaKnown RBP17.4■□□□□ 0.38
SUDS3-204ENST00000543473 SPANXN5Q5MJ07 72 aa17.4■□□□□ 0.38
SUDS3-204ENST00000543473 TMEM215Q68D42 235 aa17.4■□□□□ 0.38
SUDS3-204ENST00000543473 MAML2Q8IZL2 1156 aaPredicted RBP17.4■□□□□ 0.38
SUDS3-204ENST00000543473 ZNF426Q9BUY5 554 aa17.4■□□□□ 0.38
SUDS3-204ENST00000543473 SUCNR1Q9BXA5 334 aa17.4■□□□□ 0.38
SUDS3-204ENST00000543473 CRYBA1P05813 215 aa17.39■□□□□ 0.38
SUDS3-204ENST00000543473 CTXN2P0C2S0 81 aa17.39■□□□□ 0.38
SUDS3-204ENST00000543473 ETFDHQ16134 617 aa17.39■□□□□ 0.38
SUDS3-204ENST00000543473 RYDENQ9NUL5 291 aaKnown RBP17.39■□□□□ 0.38
SUDS3-204ENST00000543473 NSG1A0A0A6YYJ2 146 aa17.39■□□□□ 0.37
SUDS3-204ENST00000543473 GPANK1O95872 356 aa17.39■□□□□ 0.37
SUDS3-204ENST00000543473 CXCL2P19875 107 aa17.39■□□□□ 0.37
SUDS3-204ENST00000543473 ZNF770Q6IQ21 691 aaPredicted RBP17.39■□□□□ 0.37
SUDS3-204ENST00000543473 ZNF547Q8IVP9 402 aa17.39■□□□□ 0.37
SUDS3-204ENST00000543473 OR13D1Q8NGV5 346 aa17.39■□□□□ 0.37
SUDS3-204ENST00000543473 OR10J5Q8NHC4 309 aa17.39■□□□□ 0.37
SUDS3-204ENST00000543473 ZNF764Q96H86 408 aaPredicted RBP17.39■□□□□ 0.37
SUDS3-204ENST00000543473 RAB9BQ9NP90 201 aa17.39■□□□□ 0.37
SUDS3-204ENST00000543473 FOCADQ5VW36 1801 aa17.39■□□□□ 0.37
SUDS3-204ENST00000543473 AP4M1O00189 453 aa17.39■□□□□ 0.37
SUDS3-204ENST00000543473 PTGER4P35408 488 aa17.39■□□□□ 0.37
SUDS3-204ENST00000543473 SP6Q3SY56 376 aa17.39■□□□□ 0.37
SUDS3-204ENST00000543473 Q6ZS52 159 aa17.39■□□□□ 0.37
SUDS3-204ENST00000543473 OR4F5Q8NH21 305 aa17.39■□□□□ 0.37
SUDS3-204ENST00000543473 OR4F4Q96R69 305 aa17.39■□□□□ 0.37
SUDS3-204ENST00000543473 RSRP1Q9BUV0 290 aa17.39■□□□□ 0.37
SUDS3-204ENST00000543473 TMPRSS13Q9BYE2 586 aa17.39■□□□□ 0.37
SUDS3-204ENST00000543473 OR51I2Q9H344 312 aa17.39■□□□□ 0.37
SUDS3-204ENST00000543473 SCN4AP35499 1836 aa17.39■□□□□ 0.37
SUDS3-204ENST00000543473 A0A1W2PNR3 127 aa17.39■□□□□ 0.37
SUDS3-204ENST00000543473 CFDP00746 253 aaPredicted RBP17.39■□□□□ 0.37
SUDS3-204ENST00000543473 RPL7L1Q6DKI1 246 aaKnown RBP17.39■□□□□ 0.37
SUDS3-204ENST00000543473 DBX2Q6ZNG2 339 aa17.39■□□□□ 0.37
SUDS3-204ENST00000543473 PLA2G2FQ9BZM2 168 aa17.39■□□□□ 0.37
SUDS3-204ENST00000543473 OBP2BQ9NPH6 170 aa17.39■□□□□ 0.37
SUDS3-204ENST00000543473 RCL1Q9Y2P8 373 aaKnown RBP17.39■□□□□ 0.37
SUDS3-204ENST00000543473 COL11A1P12107 1806 aaPredicted RBP17.39■□□□□ 0.37
SUDS3-204ENST00000543473 LRP5LA4QPB2 252 aa17.38■□□□□ 0.37
SUDS3-204ENST00000543473 FIGNL2A6NMB9 653 aa17.38■□□□□ 0.37
SUDS3-204ENST00000543473 FGF7P21781 194 aa17.38■□□□□ 0.37
SUDS3-204ENST00000543473 SNCAP37840 140 aa17.38■□□□□ 0.37
SUDS3-204ENST00000543473 OR1D5P58170 312 aa17.38■□□□□ 0.37
SUDS3-204ENST00000543473 ZNF121P58317 390 aaPredicted RBP17.38■□□□□ 0.37
SUDS3-204ENST00000543473 LTC4SQ16873 150 aa17.38■□□□□ 0.37
SUDS3-204ENST00000543473 ZNF528Q3MIS6 628 aa17.38■□□□□ 0.37
SUDS3-204ENST00000543473 NCR3LG1Q68D85 454 aa17.38■□□□□ 0.37
SUDS3-204ENST00000543473 NUBPLQ8TB37 319 aa17.38■□□□□ 0.37
SUDS3-204ENST00000543473 OR6C1Q96RD1 312 aa17.38■□□□□ 0.37
SUDS3-204ENST00000543473 SEC11CQ9BY50 192 aa17.38■□□□□ 0.37
SUDS3-204ENST00000543473 MRM2Q9UI43 246 aaKnown RBP17.38■□□□□ 0.37
SUDS3-204ENST00000543473 SIRT4Q9Y6E7 314 aaPredicted RBP17.38■□□□□ 0.37
SUDS3-204ENST00000543473 WSB1Q9Y6I7 421 aa17.38■□□□□ 0.37
SUDS3-204ENST00000543473 CST7O76096 145 aa17.38■□□□□ 0.37
SUDS3-204ENST00000543473 GCH1P30793 250 aa17.38■□□□□ 0.37
SUDS3-204ENST00000543473 EIF4EBP2Q13542 120 aaPredicted RBP17.38■□□□□ 0.37
SUDS3-204ENST00000543473 OVCH2Q7RTZ1 564 aa17.38■□□□□ 0.37
SUDS3-204ENST00000543473 ST8SIA1Q92185 356 aa17.38■□□□□ 0.37
SUDS3-204ENST00000543473 C20orf202A1L168 122 aa17.38■□□□□ 0.37
SUDS3-204ENST00000543473 GLRA1P23415 457 aa17.38■□□□□ 0.37
SUDS3-204ENST00000543473 KCNJ3P48549 501 aa17.38■□□□□ 0.37
SUDS3-204ENST00000543473 TGFBR3Q03167 851 aa17.38■□□□□ 0.37
SUDS3-204ENST00000543473 KCNK15Q9H427 330 aa17.38■□□□□ 0.37
SUDS3-204ENST00000543473 MIOXQ9UGB7 285 aa17.38■□□□□ 0.37
SUDS3-204ENST00000543473 ADAP1O75689 374 aa17.38■□□□□ 0.37
SUDS3-204ENST00000543473 CRHP06850 196 aa17.38■□□□□ 0.37
SUDS3-204ENST00000543473 SPP1P10451 314 aa17.38■□□□□ 0.37
SUDS3-204ENST00000543473 HOXB3P14651 431 aaPredicted RBP17.38■□□□□ 0.37
SUDS3-204ENST00000543473 GLULP15104 373 aa17.38■□□□□ 0.37
SUDS3-204ENST00000543473 Q7L0L9 218 aa17.38■□□□□ 0.37
SUDS3-204ENST00000543473 GVQW1Q8N7I0 195 aa17.38■□□□□ 0.37
SUDS3-204ENST00000543473 ISOC2Q96AB3 205 aa17.38■□□□□ 0.37
SUDS3-204ENST00000543473 HEYLQ9NQ87 328 aaPredicted RBP17.38■□□□□ 0.37
SUDS3-204ENST00000543473 YKT6O15498 198 aa17.37■□□□□ 0.37
SUDS3-204ENST00000543473 GCM2O75603 506 aaPredicted RBP17.37■□□□□ 0.37
SUDS3-204ENST00000543473 METTL15P1P0C7V9 234 aa17.37■□□□□ 0.37
SUDS3-204ENST00000543473 ABOP16442 354 aa17.37■□□□□ 0.37
SUDS3-204ENST00000543473 MITD1Q8WV92 249 aa17.37■□□□□ 0.37
SUDS3-204ENST00000543473 DAZAP1Q96EP5 407 aaKnown RBP17.37■□□□□ 0.37
SUDS3-204ENST00000543473 GNG12Q9UBI6 72 aa17.37■□□□□ 0.37
SUDS3-204ENST00000543473 FBXL17Q9UF56 701 aa17.37■□□□□ 0.37
SUDS3-204ENST00000543473 PLXNB2O15031 1838 aa17.37■□□□□ 0.37
SUDS3-204ENST00000543473 A0A1B0GX78 115 aa17.37■□□□□ 0.37
SUDS3-204ENST00000543473 GP1BAP07359 652 aa17.37■□□□□ 0.37
SUDS3-204ENST00000543473 CISD3P0C7P0 127 aa17.37■□□□□ 0.37
SUDS3-204ENST00000543473 HIST1H1DP16402 221 aaKnown RBP17.37■□□□□ 0.37
SUDS3-204ENST00000543473 ENPP1P22413 925 aa17.37■□□□□ 0.37
SUDS3-204ENST00000543473 ABCD3P28288 659 aa17.37■□□□□ 0.37
SUDS3-204ENST00000543473 DCDP81605 110 aaKnown RBP17.37■□□□□ 0.37
SUDS3-204ENST00000543473 GPR119Q8TDV5 335 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms