RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 GFOD2Q3B7J2 385 aa14.19□□□□□ -0.14
SQLE-205ENST00000521232 LCN1P1Q5VSP4 162 aa14.19□□□□□ -0.14
SQLE-205ENST00000521232 C1orf146Q5VVC0 180 aa14.19□□□□□ -0.14
SQLE-205ENST00000521232 TEX36Q5VZQ5 186 aa14.19□□□□□ -0.14
SQLE-205ENST00000521232 KDM4DQ6B0I6 523 aa14.19□□□□□ -0.14
SQLE-205ENST00000521232 KCTD18Q6PI47 426 aaPredicted RBP14.19□□□□□ -0.14
SQLE-205ENST00000521232 GALNT4Q8N4A0 578 aa14.19□□□□□ -0.14
SQLE-205ENST00000521232 FTMTQ8N4E7 242 aa14.19□□□□□ -0.14
SQLE-205ENST00000521232 LYZL4Q96KX0 146 aa14.19□□□□□ -0.14
SQLE-205ENST00000521232 NUDT16L1Q9BRJ7 211 aaKnown RBP14.19□□□□□ -0.14
SQLE-205ENST00000521232 PRRG3Q9BZD7 231 aa14.19□□□□□ -0.14
SQLE-205ENST00000521232 GABARAPL1Q9H0R8 117 aa14.19□□□□□ -0.14
SQLE-205ENST00000521232 KRT84Q9NSB2 600 aa14.19□□□□□ -0.14
SQLE-205ENST00000521232 ERVK-18Q9QC07 812 aa14.19□□□□□ -0.14
SQLE-205ENST00000521232 CTSZQ9UBR2 303 aa14.19□□□□□ -0.14
SQLE-205ENST00000521232 MPC1Q9Y5U8 109 aa14.19□□□□□ -0.14
SQLE-205ENST00000521232 ZAR1LA6NP61 321 aa14.18□□□□□ -0.14
SQLE-205ENST00000521232 MITFO75030 526 aaPredicted RBP14.18□□□□□ -0.14
SQLE-205ENST00000521232 CST4P01036 141 aa14.18□□□□□ -0.14
SQLE-205ENST00000521232 ACKR3P25106 362 aa14.18□□□□□ -0.14
SQLE-205ENST00000521232 EPHA2P29317 976 aa14.18□□□□□ -0.14
SQLE-205ENST00000521232 DCTDP32321 178 aa14.18□□□□□ -0.14
SQLE-205ENST00000521232 CFHR2P36980 270 aa14.18□□□□□ -0.14
SQLE-205ENST00000521232 GNALP38405 381 aa14.18□□□□□ -0.14
SQLE-205ENST00000521232 COMPP49747 757 aaPredicted RBP14.18□□□□□ -0.14
SQLE-205ENST00000521232 ROM1Q03395 351 aa14.18□□□□□ -0.14
SQLE-205ENST00000521232 SLX4IPQ5VYV7 408 aa14.18□□□□□ -0.14
SQLE-205ENST00000521232 CD276Q5ZPR3 534 aa14.18□□□□□ -0.14
SQLE-205ENST00000521232 MEPCEQ7L2J0 689 aaKnown RBP14.18□□□□□ -0.14
SQLE-205ENST00000521232 DOK3Q7L591 496 aa14.18□□□□□ -0.14
SQLE-205ENST00000521232 KRT74Q7RTS7 529 aa14.18□□□□□ -0.14
SQLE-205ENST00000521232 FAM90A1Q86YD7 464 aa14.18□□□□□ -0.14
SQLE-205ENST00000521232 ZDHHC13Q8IUH4 622 aa14.18□□□□□ -0.14
SQLE-205ENST00000521232 OR8B12Q8NGG6 310 aa14.18□□□□□ -0.14
SQLE-205ENST00000521232 ITFG2Q969R8 447 aa14.18□□□□□ -0.14
SQLE-205ENST00000521232 ITPKCQ96DU7 683 aa14.18□□□□□ -0.14
SQLE-205ENST00000521232 MICU1Q9BPX6 476 aa14.18□□□□□ -0.14
SQLE-205ENST00000521232 PAPOLGQ9BWT3 736 aaKnown RBP14.18□□□□□ -0.14
SQLE-205ENST00000521232 MROQ9BYG7 248 aa14.18□□□□□ -0.14
SQLE-205ENST00000521232 TLNRD1Q9H1K6 362 aa14.18□□□□□ -0.14
SQLE-205ENST00000521232 TMEM14AQ9Y6G1 99 aa14.18□□□□□ -0.14
SQLE-205ENST00000521232 hCG_1807616A0A1W2PRN6 198 aa14.17□□□□□ -0.14
SQLE-205ENST00000521232 TMEM89A2RUT3 159 aa14.17□□□□□ -0.14
SQLE-205ENST00000521232 C22orf46C9J442 243 aa14.17□□□□□ -0.14
SQLE-205ENST00000521232 ADAM20O43506 726 aa14.17□□□□□ -0.14
SQLE-205ENST00000521232 ZNF254O75437 659 aa14.17□□□□□ -0.14
SQLE-205ENST00000521232 IGHV4-38-2P0DP08 117 aa14.17□□□□□ -0.14
SQLE-205ENST00000521232 FCGR1AP12314 374 aa14.17□□□□□ -0.14
SQLE-205ENST00000521232 EGR1P18146 543 aa14.17□□□□□ -0.14
SQLE-205ENST00000521232 IL5RAQ01344 420 aa14.17□□□□□ -0.14
SQLE-205ENST00000521232 FAM76BQ5HYJ3 339 aa14.17□□□□□ -0.14
SQLE-205ENST00000521232 AADACL4Q5VUY2 407 aa14.17□□□□□ -0.14
SQLE-205ENST00000521232 NXNL2Q5VZ03 156 aa14.17□□□□□ -0.14
SQLE-205ENST00000521232 C12orf73Q69YU5 71 aa14.17□□□□□ -0.14
SQLE-205ENST00000521232 WDR82Q6UXN9 313 aa14.17□□□□□ -0.14
SQLE-205ENST00000521232 RBMS3Q6XE24 437 aaKnown RBP14.17□□□□□ -0.14
SQLE-205ENST00000521232 C9orf139Q6ZV77 190 aa14.17□□□□□ -0.14
SQLE-205ENST00000521232 AMIGO2Q86SJ2 522 aa14.17□□□□□ -0.14
SQLE-205ENST00000521232 ZNF679Q8IYX0 411 aa14.17□□□□□ -0.14
SQLE-205ENST00000521232 BCL6BQ8N143 479 aaPredicted RBP14.17□□□□□ -0.14
SQLE-205ENST00000521232 SIGLECL1Q8N7X8 197 aa14.17□□□□□ -0.14
SQLE-205ENST00000521232 ASB17Q8WXJ9 295 aa14.17□□□□□ -0.14
SQLE-205ENST00000521232 LRTOMTQ8WZ04 291 aa14.17□□□□□ -0.14
SQLE-205ENST00000521232 ABCB9Q9NP78 766 aa14.17□□□□□ -0.14
SQLE-205ENST00000521232 FAM206AQ9NX38 181 aa14.17□□□□□ -0.14
SQLE-205ENST00000521232 KAAG1Q9UBP8 84 aa14.17□□□□□ -0.14
SQLE-205ENST00000521232 NBEAL1Q6ZS30 2694 aa14.17□□□□□ -0.14
SQLE-205ENST00000521232 A0A0U1RQV5 110 aa14.16□□□□□ -0.14
SQLE-205ENST00000521232 TMEM269A0A1B0GVZ9 245 aa14.16□□□□□ -0.14
SQLE-205ENST00000521232 ANXA2P2A6NMY6 339 aa14.16□□□□□ -0.14
SQLE-205ENST00000521232 ZNF850A8MQ14 1090 aa14.16□□□□□ -0.14
SQLE-205ENST00000521232 CDIPTO14735 213 aa14.16□□□□□ -0.14
SQLE-205ENST00000521232 ENSAO43768 121 aaKnown RBP14.16□□□□□ -0.14
SQLE-205ENST00000521232 PLATP00750 562 aa14.16□□□□□ -0.14
SQLE-205ENST00000521232 GYPAP02724 150 aa14.16□□□□□ -0.14
SQLE-205ENST00000521232 LIPFP07098 398 aa14.16□□□□□ -0.14
SQLE-205ENST00000521232 MRPL3P09001 348 aaKnown RBP14.16□□□□□ -0.14
SQLE-205ENST00000521232 MUC1P15941 1255 aaPredicted RBP14.16□□□□□ -0.14
SQLE-205ENST00000521232 UBA52P62987 128 aaKnown RBP14.16□□□□□ -0.14
SQLE-205ENST00000521232 CSNK2BP67870 215 aa14.16□□□□□ -0.14
SQLE-205ENST00000521232 PRDX4Q13162 271 aa14.16□□□□□ -0.14
SQLE-205ENST00000521232 C11orf91Q3C1V1 193 aa14.16□□□□□ -0.14
SQLE-205ENST00000521232 C12orf54Q6X4T0 127 aa14.16□□□□□ -0.14
SQLE-205ENST00000521232 BCDIN3DQ7Z5W3 292 aaKnown RBP14.16□□□□□ -0.14
SQLE-205ENST00000521232 TCEANCQ8N8B7 351 aa14.16□□□□□ -0.14
SQLE-205ENST00000521232 TMEM163Q8TC26 289 aa14.16□□□□□ -0.14
SQLE-205ENST00000521232 LRRC29Q8WV35 223 aa14.16□□□□□ -0.14
SQLE-205ENST00000521232 OR5P3Q8WZ94 311 aa14.16□□□□□ -0.14
SQLE-205ENST00000521232 ZNF48Q96MX3 618 aaPredicted RBP14.16□□□□□ -0.14
SQLE-205ENST00000521232 TECTBQ96PL2 329 aa14.16□□□□□ -0.14
SQLE-205ENST00000521232 OR8B4Q96RC9 309 aa14.16□□□□□ -0.14
SQLE-205ENST00000521232 RTL8AQ9BWD3 113 aa14.16□□□□□ -0.14
SQLE-205ENST00000521232 MS4A7Q9GZW8 240 aaPredicted RBP14.16□□□□□ -0.14
SQLE-205ENST00000521232 H2AFY2Q9P0M6 372 aaPredicted RBP14.16□□□□□ -0.14
SQLE-205ENST00000521232 ENOPH1Q9UHY7 261 aa14.16□□□□□ -0.14
SQLE-205ENST00000521232 COPS3Q9UNS2 423 aa14.16□□□□□ -0.14
SQLE-205ENST00000521232 SLC22A31A6NKX4 558 aa14.15□□□□□ -0.14
SQLE-205ENST00000521232 TMEM210A6NLX4 147 aa14.15□□□□□ -0.14
SQLE-205ENST00000521232 PRR32B1ATL7 298 aa14.15□□□□□ -0.14
SQLE-205ENST00000521232 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms