RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 ZNF816-ZNF321PA0A0X1KG74 233 aa16.57■□□□□ 0.24
USP39-218ENST00000493829 ANKRD30BLA7E2S9 258 aa16.57■□□□□ 0.24
USP39-218ENST00000493829 ZNF850A8MQ14 1090 aa16.57■□□□□ 0.24
USP39-218ENST00000493829 IQCF6A8MYZ5 107 aa16.57■□□□□ 0.24
USP39-218ENST00000493829 UCHL1P09936 223 aa16.57■□□□□ 0.24
USP39-218ENST00000493829 SELEP16581 610 aa16.57■□□□□ 0.24
USP39-218ENST00000493829 CA6P23280 308 aa16.57■□□□□ 0.24
USP39-218ENST00000493829 FOXB2Q5VYV0 432 aa16.57■□□□□ 0.24
USP39-218ENST00000493829 UNQ9370/PRO34162Q6UXP9 181 aa16.57■□□□□ 0.24
USP39-218ENST00000493829 Q6ZSR3 168 aa16.57■□□□□ 0.24
USP39-218ENST00000493829 OR51A2Q8NGJ7 313 aa16.57■□□□□ 0.24
USP39-218ENST00000493829 UBTD1Q9HAC8 227 aa16.57■□□□□ 0.24
USP39-218ENST00000493829 MSL2Q9HCI7 577 aa16.57■□□□□ 0.24
USP39-218ENST00000493829 SPTAN1Q13813 2472 aaKnown RBP16.57■□□□□ 0.24
USP39-218ENST00000493829 SHISA3A0PJX4 238 aa16.56■□□□□ 0.24
USP39-218ENST00000493829 MAS1P04201 325 aa16.56■□□□□ 0.24
USP39-218ENST00000493829 KITLGP21583 273 aa16.56■□□□□ 0.24
USP39-218ENST00000493829 SERPINF1P36955 418 aa16.56■□□□□ 0.24
USP39-218ENST00000493829 ALDH3B1P43353 468 aa16.56■□□□□ 0.24
USP39-218ENST00000493829 SELENOVP59797 346 aa16.56■□□□□ 0.24
USP39-218ENST00000493829 PRDX4Q13162 271 aa16.56■□□□□ 0.24
USP39-218ENST00000493829 NKPD1Q17RQ9 610 aa16.56■□□□□ 0.24
USP39-218ENST00000493829 PLCXD3Q63HM9 321 aa16.56■□□□□ 0.24
USP39-218ENST00000493829 SERPINA12Q8IW75 414 aa16.56■□□□□ 0.24
USP39-218ENST00000493829 PARP16Q8N5Y8 322 aa16.56■□□□□ 0.24
USP39-218ENST00000493829 CCDC54Q8NEL0 328 aa16.56■□□□□ 0.24
USP39-218ENST00000493829 CSNK2A3Q8NEV1 391 aa16.56■□□□□ 0.24
USP39-218ENST00000493829 NDNFQ8TB73 568 aa16.56■□□□□ 0.24
USP39-218ENST00000493829 NKX3-1Q99801 234 aaPredicted RBP16.56■□□□□ 0.24
USP39-218ENST00000493829 CHST5Q9GZS9 411 aa16.56■□□□□ 0.24
USP39-218ENST00000493829 TAAR3PQ9P1P4 343 aa16.56■□□□□ 0.24
USP39-218ENST00000493829 CKLFQ9UBR5 152 aa16.56■□□□□ 0.24
USP39-218ENST00000493829 GSTK1Q9Y2Q3 226 aa16.56■□□□□ 0.24
USP39-218ENST00000493829 DHRS7CA6NNS2 312 aa16.56■□□□□ 0.24
USP39-218ENST00000493829 ARL6IP5O75915 188 aa16.56■□□□□ 0.24
USP39-218ENST00000493829 OCMP0CE72 109 aaPredicted RBP16.56■□□□□ 0.24
USP39-218ENST00000493829 GALP22466 123 aa16.56■□□□□ 0.24
USP39-218ENST00000493829 MYL9P24844 172 aa16.56■□□□□ 0.24
USP39-218ENST00000493829 FGF9P31371 208 aaPredicted RBP16.56■□□□□ 0.24
USP39-218ENST00000493829 MXD1Q05195 221 aa16.56■□□□□ 0.24
USP39-218ENST00000493829 PAMR1Q6UXH9 720 aa16.56■□□□□ 0.24
USP39-218ENST00000493829 MOB3CQ70IA8 216 aa16.56■□□□□ 0.24
USP39-218ENST00000493829 FTMTQ8N4E7 242 aa16.56■□□□□ 0.24
USP39-218ENST00000493829 OR10AD1Q8NGE0 317 aa16.56■□□□□ 0.24
USP39-218ENST00000493829 TRMT10AQ8TBZ6 339 aaKnown RBP16.56■□□□□ 0.24
USP39-218ENST00000493829 UBASH3BQ8TF42 649 aa16.56■□□□□ 0.24
USP39-218ENST00000493829 RAB2BQ8WUD1 216 aa16.56■□□□□ 0.24
USP39-218ENST00000493829 THRSPQ92748 146 aa16.56■□□□□ 0.24
USP39-218ENST00000493829 PIGTQ969N2 578 aa16.56■□□□□ 0.24
USP39-218ENST00000493829 FBXW5Q969U6 566 aa16.56■□□□□ 0.24
USP39-218ENST00000493829 KCTD7Q96MP8 289 aa16.56■□□□□ 0.24
USP39-218ENST00000493829 DHRS9Q9BPW9 319 aa16.56■□□□□ 0.24
USP39-218ENST00000493829 ADAT1Q9BUB4 502 aaKnown RBP16.56■□□□□ 0.24
USP39-218ENST00000493829 ZCCHC4Q9H5U6 513 aa16.56■□□□□ 0.24
USP39-218ENST00000493829 TCF7L1Q9HCS4 588 aa16.56■□□□□ 0.24
USP39-218ENST00000493829 IGLV3-9A0A075B6K5 115 aa16.55■□□□□ 0.24
USP39-218ENST00000493829 H3BMQ9 156 aa16.55■□□□□ 0.24
USP39-218ENST00000493829 GMDSO60547 372 aa16.55■□□□□ 0.24
USP39-218ENST00000493829 NRASP01111 189 aa16.55■□□□□ 0.24
USP39-218ENST00000493829 IGHV3-13P01766 116 aa16.55■□□□□ 0.24
USP39-218ENST00000493829 DDOSTP39656 456 aa16.55■□□□□ 0.24
USP39-218ENST00000493829 TMBIM6P55061 237 aa16.55■□□□□ 0.24
USP39-218ENST00000493829 PPP3R1P63098 170 aa16.55■□□□□ 0.24
USP39-218ENST00000493829 CLVS2Q5SYC1 327 aa16.55■□□□□ 0.24
USP39-218ENST00000493829 HIST2H2BCQ6DN03 193 aa16.55■□□□□ 0.24
USP39-218ENST00000493829 TMEM200AQ86VY9 491 aa16.55■□□□□ 0.24
USP39-218ENST00000493829 DNAAF1Q8NEP3 725 aa16.55■□□□□ 0.24
USP39-218ENST00000493829 OR8G5Q8NG78 346 aa16.55■□□□□ 0.24
USP39-218ENST00000493829 OR5D14Q8NGL3 314 aa16.55■□□□□ 0.24
USP39-218ENST00000493829 RSL24D1Q9UHA3 163 aaKnown RBP16.55■□□□□ 0.24
USP39-218ENST00000493829 PLCE1Q9P212 2302 aa16.55■□□□□ 0.24
USP39-218ENST00000493829 IGHV3-64DA0A0J9YX35 117 aa16.54■□□□□ 0.24
USP39-218ENST00000493829 SMIM31A0A1B0GVY4 71 aa16.54■□□□□ 0.24
USP39-218ENST00000493829 ZSCAN5BA6NJL1 495 aa16.54■□□□□ 0.24
USP39-218ENST00000493829 H0YL77 283 aa16.54■□□□□ 0.24
USP39-218ENST00000493829 NCR1O76036 304 aa16.54■□□□□ 0.24
USP39-218ENST00000493829 FSTP19883 344 aa16.54■□□□□ 0.24
USP39-218ENST00000493829 APOBEC3AP31941 199 aaPredicted RBP16.54■□□□□ 0.24
USP39-218ENST00000493829 SERPINB10P48595 397 aa16.54■□□□□ 0.24
USP39-218ENST00000493829 SPCS2Q15005 226 aa16.54■□□□□ 0.24
USP39-218ENST00000493829 UBE2V2Q15819 145 aa16.54■□□□□ 0.24
USP39-218ENST00000493829 GDPGP1Q6ZNW5 385 aa16.54■□□□□ 0.24
USP39-218ENST00000493829 Q6ZR03 302 aa16.54■□□□□ 0.24
USP39-218ENST00000493829 ZDHHC23Q8IYP9 409 aa16.54■□□□□ 0.24
USP39-218ENST00000493829 OR1M1Q8NGA1 313 aa16.54■□□□□ 0.24
USP39-218ENST00000493829 PP6455Q8WZ26 134 aa16.54■□□□□ 0.24
USP39-218ENST00000493829 C12orf43Q96C57 262 aaKnown RBP16.54■□□□□ 0.24
USP39-218ENST00000493829 PSMG3-AS1Q96PY0 264 aa16.54■□□□□ 0.24
USP39-218ENST00000493829 SPACA5Q96QH8 159 aa16.54■□□□□ 0.24
USP39-218ENST00000493829 MRPL15Q9P015 296 aaKnown RBP16.54■□□□□ 0.24
USP39-218ENST00000493829 PLEKHB1Q9UF11 243 aaPredicted RBP16.54■□□□□ 0.24
USP39-218ENST00000493829 USP9YO00507 2555 aaPredicted RBP16.53■□□□□ 0.24
USP39-218ENST00000493829 PLSCR5A0PG75 271 aa16.53■□□□□ 0.24
USP39-218ENST00000493829 VSTM5A8MXK1 200 aa16.53■□□□□ 0.24
USP39-218ENST00000493829 HS3ST1O14792 307 aa16.53■□□□□ 0.24
USP39-218ENST00000493829 SULT1B1O43704 296 aa16.53■□□□□ 0.24
USP39-218ENST00000493829 CST4P01036 141 aa16.53■□□□□ 0.24
USP39-218ENST00000493829 RAF1P04049 648 aa16.53■□□□□ 0.24
USP39-218ENST00000493829 CLEC2LP0C7M8 214 aa16.53■□□□□ 0.24
USP39-218ENST00000493829 NAT2P11245 290 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms