RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 LHX4Q969G2 390 aa17.41■□□□□ 0.38
VSX1-206ENST00000444511 ASB9Q96DX5 294 aa17.41■□□□□ 0.38
VSX1-206ENST00000444511 CCT8L2Q96SF2 557 aa17.41■□□□□ 0.38
VSX1-206ENST00000444511 AMELYQ99218 206 aa17.41■□□□□ 0.38
VSX1-206ENST00000444511 PAPOLGQ9BWT3 736 aaKnown RBP17.41■□□□□ 0.38
VSX1-206ENST00000444511 SIRPDQ9H106 197 aa17.41■□□□□ 0.38
VSX1-206ENST00000444511 OR51V1Q9H2C8 321 aa17.41■□□□□ 0.38
VSX1-206ENST00000444511 PRPF19Q9UMS4 504 aaKnown RBP17.41■□□□□ 0.38
VSX1-206ENST00000444511 MELTFP08582 738 aa17.4■□□□□ 0.38
VSX1-206ENST00000444511 MUC1P15941 1255 aaPredicted RBP17.4■□□□□ 0.38
VSX1-206ENST00000444511 POU1F1P28069 291 aa17.4■□□□□ 0.38
VSX1-206ENST00000444511 OPRL1P41146 370 aa17.4■□□□□ 0.38
VSX1-206ENST00000444511 NAA10P41227 235 aaPredicted RBP17.4■□□□□ 0.38
VSX1-206ENST00000444511 CSNK2BP67870 215 aa17.4■□□□□ 0.38
VSX1-206ENST00000444511 SNCBQ16143 134 aa17.4■□□□□ 0.38
VSX1-206ENST00000444511 C11orf53Q8IXP5 236 aa17.4■□□□□ 0.38
VSX1-206ENST00000444511 TIGD4Q8IY51 512 aa17.4■□□□□ 0.38
VSX1-206ENST00000444511 TMEM86BQ8N661 226 aa17.4■□□□□ 0.38
VSX1-206ENST00000444511 CCL13Q99616 98 aa17.4■□□□□ 0.38
VSX1-206ENST00000444511 MICU1Q9BPX6 476 aa17.4■□□□□ 0.38
VSX1-206ENST00000444511 CHID1Q9BWS9 393 aa17.4■□□□□ 0.38
VSX1-206ENST00000444511 CHIAQ9BZP6 476 aa17.4■□□□□ 0.38
VSX1-206ENST00000444511 RGCCQ9H4X1 137 aa17.4■□□□□ 0.38
VSX1-206ENST00000444511 ACOXLQ9NUZ1 547 aa17.4■□□□□ 0.38
VSX1-206ENST00000444511 RHBDD3Q9Y3P4 386 aa17.4■□□□□ 0.38
VSX1-206ENST00000444511 MMP24Q9Y5R2 645 aa17.4■□□□□ 0.38
VSX1-206ENST00000444511 IGHV1-69DA0A0B4J2H0 117 aa17.39■□□□□ 0.37
VSX1-206ENST00000444511 A0A1B0GUS0 222 aa17.39■□□□□ 0.37
VSX1-206ENST00000444511 ARRDC5A6NEK1 342 aa17.39■□□□□ 0.37
VSX1-206ENST00000444511 ANXA2P2A6NMY6 339 aa17.39■□□□□ 0.37
VSX1-206ENST00000444511 PRR23D1E9PI22 279 aaPredicted RBP17.39■□□□□ 0.37
VSX1-206ENST00000444511 GNGT2O14610 69 aa17.39■□□□□ 0.37
VSX1-206ENST00000444511 FCN3O75636 299 aa17.39■□□□□ 0.37
VSX1-206ENST00000444511 IGHV1-69P01742 117 aa17.39■□□□□ 0.37
VSX1-206ENST00000444511 PRR23D2P0DMB1 279 aaPredicted RBP17.39■□□□□ 0.37
VSX1-206ENST00000444511 RAG2P55895 527 aa17.39■□□□□ 0.37
VSX1-206ENST00000444511 IL5RAQ01344 420 aa17.39■□□□□ 0.37
VSX1-206ENST00000444511 KLHL12Q53G59 568 aa17.39■□□□□ 0.37
VSX1-206ENST00000444511 WDR38Q5JTN6 314 aa17.39■□□□□ 0.37
VSX1-206ENST00000444511 WDR82Q6UXN9 313 aa17.39■□□□□ 0.37
VSX1-206ENST00000444511 SLC36A1Q7Z2H8 476 aa17.39■□□□□ 0.37
VSX1-206ENST00000444511 OR4F5Q8NH21 305 aa17.39■□□□□ 0.37
VSX1-206ENST00000444511 SSMEM1Q8WWF3 244 aa17.39■□□□□ 0.37
VSX1-206ENST00000444511 PPP1R3EQ9H7J1 279 aa17.39■□□□□ 0.37
VSX1-206ENST00000444511 CNTD2Q9H8S5 307 aa17.39■□□□□ 0.37
VSX1-206ENST00000444511 BEX1Q9HBH7 125 aa17.39■□□□□ 0.37
VSX1-206ENST00000444511 ZNF319Q9P2F9 582 aa17.39■□□□□ 0.37
VSX1-206ENST00000444511 RPUSD1Q9UJJ7 312 aaKnown RBP17.39■□□□□ 0.37
VSX1-206ENST00000444511 POMT1Q9Y6A1 747 aa17.39■□□□□ 0.37
VSX1-206ENST00000444511 CDIPTO14735 213 aa17.38■□□□□ 0.37
VSX1-206ENST00000444511 KNG1P01042 644 aa17.38■□□□□ 0.37
VSX1-206ENST00000444511 LYNP07948 512 aa17.38■□□□□ 0.37
VSX1-206ENST00000444511 PLBD1Q6P4A8 553 aa17.38■□□□□ 0.37
VSX1-206ENST00000444511 GALNT4Q8N4A0 578 aa17.38■□□□□ 0.37
VSX1-206ENST00000444511 ZNF454Q8N9F8 522 aa17.38■□□□□ 0.37
VSX1-206ENST00000444511 SCCPDHQ8NBX0 429 aa17.38■□□□□ 0.37
VSX1-206ENST00000444511 CCDC197Q8NCU1 140 aa17.38■□□□□ 0.37
VSX1-206ENST00000444511 OTOSQ8NHW6 89 aa17.38■□□□□ 0.37
VSX1-206ENST00000444511 THEM6Q8WUY1 208 aa17.38■□□□□ 0.37
VSX1-206ENST00000444511 CLPTM1LQ96KA5 538 aa17.38■□□□□ 0.37
VSX1-206ENST00000444511 RTL8AQ9BWD3 113 aa17.38■□□□□ 0.37
VSX1-206ENST00000444511 PDP1Q9P0J1 537 aaPredicted RBP17.38■□□□□ 0.37
VSX1-206ENST00000444511 A0A1B0GW55 424 aa17.37■□□□□ 0.37
VSX1-206ENST00000444511 SELENOFO60613 162 aa17.37■□□□□ 0.37
VSX1-206ENST00000444511 DUX4L2P0CJ85 424 aa17.37■□□□□ 0.37
VSX1-206ENST00000444511 DUX4L3P0CJ86 424 aa17.37■□□□□ 0.37
VSX1-206ENST00000444511 DUX4L4P0CJ87 422 aa17.37■□□□□ 0.37
VSX1-206ENST00000444511 DUX4L5P0CJ88 424 aa17.37■□□□□ 0.37
VSX1-206ENST00000444511 DUX4L6P0CJ89 424 aa17.37■□□□□ 0.37
VSX1-206ENST00000444511 DUX4L7P0CJ90 424 aa17.37■□□□□ 0.37
VSX1-206ENST00000444511 ELF3P78545 371 aaPredicted RBP17.37■□□□□ 0.37
VSX1-206ENST00000444511 GINS1Q14691 196 aa17.37■□□□□ 0.37
VSX1-206ENST00000444511 CDONQ4KMG0 1287 aa17.37■□□□□ 0.37
VSX1-206ENST00000444511 DUX4L9Q6RFH8 374 aaPredicted RBP17.37■□□□□ 0.37
VSX1-206ENST00000444511 TREML4Q6UXN2 200 aa17.37■□□□□ 0.37
VSX1-206ENST00000444511 C17orf107Q6ZR85 190 aa17.37■□□□□ 0.37
VSX1-206ENST00000444511 ADGRG5Q8IZF4 528 aa17.37■□□□□ 0.37
VSX1-206ENST00000444511 FGFRL1Q8N441 504 aa17.37■□□□□ 0.37
VSX1-206ENST00000444511 FAM216BQ8N7L0 139 aa17.37■□□□□ 0.37
VSX1-206ENST00000444511 TBC1D15Q8TC07 691 aa17.37■□□□□ 0.37
VSX1-206ENST00000444511 C12orf43Q96C57 262 aaKnown RBP17.37■□□□□ 0.37
VSX1-206ENST00000444511 ITPKCQ96DU7 683 aa17.37■□□□□ 0.37
VSX1-206ENST00000444511 ZNF556Q9HAH1 456 aa17.37■□□□□ 0.37
VSX1-206ENST00000444511 ONECUT1Q9UBC0 465 aa17.37■□□□□ 0.37
VSX1-206ENST00000444511 DUX4Q9UBX2 424 aa17.37■□□□□ 0.37
VSX1-206ENST00000444511 MPC1Q9Y5U8 109 aa17.37■□□□□ 0.37
VSX1-206ENST00000444511 KPTNQ9Y664 436 aa17.37■□□□□ 0.37
VSX1-206ENST00000444511 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.36■□□□□ 0.37
VSX1-206ENST00000444511 ACOT8O14734 319 aa17.36■□□□□ 0.37
VSX1-206ENST00000444511 NDUFB3O43676 98 aa17.36■□□□□ 0.37
VSX1-206ENST00000444511 T-ENOLP0DO92 83 aa17.36■□□□□ 0.37
VSX1-206ENST00000444511 GMFBP60983 142 aa17.36■□□□□ 0.37
VSX1-206ENST00000444511 PRDX4Q13162 271 aa17.36■□□□□ 0.37
VSX1-206ENST00000444511 VMO1Q7Z5L0 202 aa17.36■□□□□ 0.37
VSX1-206ENST00000444511 PDZD9Q8IXQ8 264 aa17.36■□□□□ 0.37
VSX1-206ENST00000444511 KIR3DL3Q8N743 410 aa17.36■□□□□ 0.37
VSX1-206ENST00000444511 SEH1LQ96EE3 360 aa17.36■□□□□ 0.37
VSX1-206ENST00000444511 TLNRD1Q9H1K6 362 aa17.36■□□□□ 0.37
VSX1-206ENST00000444511 ABCB9Q9NP78 766 aa17.36■□□□□ 0.37
VSX1-206ENST00000444511 TAS2R1Q9NYW7 299 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms