RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 CLN5O75503 358 aa17.75■□□□□ 0.43
SHANK1-203ENST00000391813 PPICP45877 212 aa17.75■□□□□ 0.43
SHANK1-203ENST00000391813 PPIAP62937 165 aaKnown RBP17.75■□□□□ 0.43
SHANK1-203ENST00000391813 PWWP2BQ6NUJ5 590 aa17.75■□□□□ 0.43
SHANK1-203ENST00000391813 CATSPERDQ86XM0 798 aa17.75■□□□□ 0.43
SHANK1-203ENST00000391813 ZNF845Q96IR2 970 aaPredicted RBP17.75■□□□□ 0.43
SHANK1-203ENST00000391813 C4orf45Q96LM5 186 aa17.75■□□□□ 0.43
SHANK1-203ENST00000391813 OR6C1Q96RD1 312 aa17.75■□□□□ 0.43
SHANK1-203ENST00000391813 HSD17B6O14756 317 aa17.74■□□□□ 0.43
SHANK1-203ENST00000391813 CD96P40200 585 aa17.74■□□□□ 0.43
SHANK1-203ENST00000391813 HIST1H3AP68431 136 aa17.74■□□□□ 0.43
SHANK1-203ENST00000391813 SRYQ05066 204 aa17.74■□□□□ 0.43
SHANK1-203ENST00000391813 TIGITQ495A1 244 aa17.74■□□□□ 0.43
SHANK1-203ENST00000391813 SEZ6L2Q6UXD5 910 aa17.74■□□□□ 0.43
SHANK1-203ENST00000391813 SHISA6Q6ZSJ9 500 aa17.74■□□□□ 0.43
SHANK1-203ENST00000391813 FBLIM1Q8WUP2 373 aa17.74■□□□□ 0.43
SHANK1-203ENST00000391813 M0R143 59 aa17.74■□□□□ 0.43
SHANK1-203ENST00000391813 KLF9Q13886 244 aaPredicted RBP17.74■□□□□ 0.43
SHANK1-203ENST00000391813 ELAVL1Q15717 326 aaKnown RBP17.74■□□□□ 0.43
SHANK1-203ENST00000391813 ZNF362Q5T0B9 420 aaPredicted RBP17.74■□□□□ 0.43
SHANK1-203ENST00000391813 OR2AE1Q8NHA4 323 aa17.74■□□□□ 0.43
SHANK1-203ENST00000391813 WDR34Q96EX3 536 aa17.74■□□□□ 0.43
SHANK1-203ENST00000391813 PBOV1Q9GZY1 135 aa17.74■□□□□ 0.43
SHANK1-203ENST00000391813 SLCO1B1Q9Y6L6 691 aa17.74■□□□□ 0.43
SHANK1-203ENST00000391813 K7ESM1 405 aa17.74■□□□□ 0.43
SHANK1-203ENST00000391813 ETFDHQ16134 617 aa17.74■□□□□ 0.43
SHANK1-203ENST00000391813 CMBLQ96DG6 245 aa17.74■□□□□ 0.43
SHANK1-203ENST00000391813 SHARPINQ9H0F6 387 aa17.74■□□□□ 0.43
SHANK1-203ENST00000391813 SLC35D1Q9NTN3 355 aa17.74■□□□□ 0.43
SHANK1-203ENST00000391813 OR10P1Q8NGE3 313 aa17.74■□□□□ 0.43
SHANK1-203ENST00000391813 MRPS18AQ9NVS2 196 aaKnown RBP17.74■□□□□ 0.43
SHANK1-203ENST00000391813 GNG12Q9UBI6 72 aa17.74■□□□□ 0.43
SHANK1-203ENST00000391813 LHX6Q9UPM6 363 aa17.74■□□□□ 0.43
SHANK1-203ENST00000391813 CCL27Q9Y4X3 112 aa17.74■□□□□ 0.43
SHANK1-203ENST00000391813 A0A087WUJ7 227 aa17.73■□□□□ 0.43
SHANK1-203ENST00000391813 NMBP08949 121 aa17.73■□□□□ 0.43
SHANK1-203ENST00000391813 PNRC1Q12796 327 aaPredicted RBP17.73■□□□□ 0.43
SHANK1-203ENST00000391813 ABHD5Q8WTS1 349 aa17.73■□□□□ 0.43
SHANK1-203ENST00000391813 MYEOVQ96EZ4 313 aa17.73■□□□□ 0.43
SHANK1-203ENST00000391813 C1QTNF6Q9BXI9 259 aa17.73■□□□□ 0.43
SHANK1-203ENST00000391813 ZNF107Q9UII5 783 aaPredicted RBP17.73■□□□□ 0.43
SHANK1-203ENST00000391813 BOKQ9UMX3 212 aaPredicted RBP17.73■□□□□ 0.43
SHANK1-203ENST00000391813 A0A0B4J2E0 115 aa17.73■□□□□ 0.43
SHANK1-203ENST00000391813 A0A1B0GX12 115 aa17.73■□□□□ 0.43
SHANK1-203ENST00000391813 VAMP5O95183 116 aa17.73■□□□□ 0.43
SHANK1-203ENST00000391813 ABHD16AO95870 558 aa17.73■□□□□ 0.43
SHANK1-203ENST00000391813 OPRM1P35372 400 aa17.73■□□□□ 0.43
SHANK1-203ENST00000391813 ZNF345Q14585 488 aa17.73■□□□□ 0.43
SHANK1-203ENST00000391813 AWAT1Q58HT5 328 aa17.73■□□□□ 0.43
SHANK1-203ENST00000391813 SPANXN5Q5MJ07 72 aa17.73■□□□□ 0.43
SHANK1-203ENST00000391813 OR2A1Q8NGT9 310 aa17.73■□□□□ 0.43
SHANK1-203ENST00000391813 LILRB1Q8NHL6 650 aaPredicted RBP17.73■□□□□ 0.43
SHANK1-203ENST00000391813 CHST6Q9GZX3 395 aa17.73■□□□□ 0.43
SHANK1-203ENST00000391813 PRO1933Q9H354 126 aa17.73■□□□□ 0.43
SHANK1-203ENST00000391813 RASL12Q9NYN1 266 aa17.73■□□□□ 0.43
SHANK1-203ENST00000391813 TMED3Q9Y3Q3 217 aa17.73■□□□□ 0.43
SHANK1-203ENST00000391813 HSPB6O14558 160 aa17.73■□□□□ 0.43
SHANK1-203ENST00000391813 OGG1O15527 345 aa17.73■□□□□ 0.43
SHANK1-203ENST00000391813 RAB32Q13637 225 aa17.73■□□□□ 0.43
SHANK1-203ENST00000391813 LPAR3Q9UBY5 353 aa17.73■□□□□ 0.43
SHANK1-203ENST00000391813 ZNF749O43361 778 aa17.72■□□□□ 0.43
SHANK1-203ENST00000391813 CST2P09228 141 aa17.72■□□□□ 0.43
SHANK1-203ENST00000391813 SDHBP21912 280 aa17.72■□□□□ 0.43
SHANK1-203ENST00000391813 C9orf152Q5JTZ5 239 aa17.72■□□□□ 0.43
SHANK1-203ENST00000391813 NXPH3O95157 252 aa17.72■□□□□ 0.43
SHANK1-203ENST00000391813 QDPRP09417 244 aa17.72■□□□□ 0.43
SHANK1-203ENST00000391813 OR8U8P0C7N1 319 aa17.72■□□□□ 0.43
SHANK1-203ENST00000391813 NTF3P20783 257 aa17.72■□□□□ 0.43
SHANK1-203ENST00000391813 ASTLQ6HA08 431 aaPredicted RBP17.72■□□□□ 0.43
SHANK1-203ENST00000391813 SPACA5Q96QH8 159 aa17.72■□□□□ 0.43
SHANK1-203ENST00000391813 MRPL22Q9NWU5 206 aaKnown RBP17.72■□□□□ 0.43
SHANK1-203ENST00000391813 SHROOM3Q8TF72 1996 aa17.72■□□□□ 0.43
SHANK1-203ENST00000391813 CRHP06850 196 aa17.72■□□□□ 0.43
SHANK1-203ENST00000391813 PRTGQ2VWP7 1150 aa17.72■□□□□ 0.43
SHANK1-203ENST00000391813 OR4N2Q8NGD1 307 aa17.72■□□□□ 0.43
SHANK1-203ENST00000391813 IP6K3Q96PC2 410 aa17.72■□□□□ 0.43
SHANK1-203ENST00000391813 PARD6AQ9NPB6 346 aa17.72■□□□□ 0.43
SHANK1-203ENST00000391813 TCAPO15273 167 aa17.72■□□□□ 0.43
SHANK1-203ENST00000391813 HNRNPA3P51991 378 aaKnown RBP17.72■□□□□ 0.43
SHANK1-203ENST00000391813 CIB3Q96Q77 187 aaPredicted RBP17.72■□□□□ 0.43
SHANK1-203ENST00000391813 PPP1CBP62140 327 aa17.71■□□□□ 0.43
SHANK1-203ENST00000391813 LBHQ53QV2 105 aaPredicted RBP17.71■□□□□ 0.43
SHANK1-203ENST00000391813 ETFBKMTQ8IXQ9 262 aa17.71■□□□□ 0.43
SHANK1-203ENST00000391813 LINC00518Q8N0U6 118 aa17.71■□□□□ 0.43
SHANK1-203ENST00000391813 ZNF230Q9UIE0 474 aaPredicted RBP17.71■□□□□ 0.43
SHANK1-203ENST00000391813 RCL1Q9Y2P8 373 aaKnown RBP17.71■□□□□ 0.43
SHANK1-203ENST00000391813 OPN1MWP04001 364 aa17.71■□□□□ 0.43
SHANK1-203ENST00000391813 OPN1MW2P0DN77 364 aa17.71■□□□□ 0.43
SHANK1-203ENST00000391813 OPN1MW3P0DN78 364 aa17.71■□□□□ 0.43
SHANK1-203ENST00000391813 GABRG2P18507 467 aa17.71■□□□□ 0.43
SHANK1-203ENST00000391813 ZNF764Q96H86 408 aaPredicted RBP17.71■□□□□ 0.43
SHANK1-203ENST00000391813 C7orf77A4D0Y5 90 aa17.71■□□□□ 0.43
SHANK1-203ENST00000391813 M0QZK8 103 aa17.71■□□□□ 0.43
SHANK1-203ENST00000391813 MFNGO00587 321 aa17.71■□□□□ 0.43
SHANK1-203ENST00000391813 GGCTO75223 188 aaKnown RBP17.71■□□□□ 0.43
SHANK1-203ENST00000391813 MAML2Q8IZL2 1156 aaPredicted RBP17.71■□□□□ 0.43
SHANK1-203ENST00000391813 ST8SIA1Q92185 356 aa17.71■□□□□ 0.43
SHANK1-203ENST00000391813 MTCH2Q9Y6C9 303 aa17.71■□□□□ 0.43
SHANK1-203ENST00000391813 KCNE3Q9Y6H6 103 aa17.71■□□□□ 0.43
SHANK1-203ENST00000391813 AKR7A3O95154 331 aa17.71■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms