RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 NFYAP23511 347 aaPredicted RBP9.09□□□□□ -0.95
COL5A1-202ENST00000371820 IL32P24001 234 aa9.09□□□□□ -0.95
COL5A1-202ENST00000371820 PRSS3P35030 304 aa9.09□□□□□ -0.95
COL5A1-202ENST00000371820 CDKN2AP42771 156 aaKnown RBP9.09□□□□□ -0.95
COL5A1-202ENST00000371820 SRP9P49458 86 aaKnown RBP9.09□□□□□ -0.95
COL5A1-202ENST00000371820 POLR2HP52434 150 aaKnown RBP9.09□□□□□ -0.95
COL5A1-202ENST00000371820 RAP1BP61224 184 aa9.09□□□□□ -0.95
COL5A1-202ENST00000371820 RAP1AP62834 184 aa9.09□□□□□ -0.95
COL5A1-202ENST00000371820 FGL1Q08830 312 aa9.09□□□□□ -0.95
COL5A1-202ENST00000371820 P2RY6Q15077 328 aa9.09□□□□□ -0.95
COL5A1-202ENST00000371820 RAB12Q6IQ22 244 aa9.09□□□□□ -0.95
COL5A1-202ENST00000371820 SLC18B1Q6NT16 456 aa9.09□□□□□ -0.95
COL5A1-202ENST00000371820 ANKRD16Q6P6B7 361 aa9.09□□□□□ -0.95
COL5A1-202ENST00000371820 TFAP2EQ6VUC0 442 aa9.09□□□□□ -0.95
COL5A1-202ENST00000371820 SSX6Q7RTT6 188 aa9.09□□□□□ -0.95
COL5A1-202ENST00000371820 GLCCI1Q86VQ1 547 aa9.09□□□□□ -0.95
COL5A1-202ENST00000371820 TUSC5Q8IXB3 177 aa9.09□□□□□ -0.95
COL5A1-202ENST00000371820 TIGD4Q8IY51 512 aa9.09□□□□□ -0.95
COL5A1-202ENST00000371820 DNAAF1Q8NEP3 725 aa9.09□□□□□ -0.95
COL5A1-202ENST00000371820 WFDC11Q8NEX6 87 aa9.09□□□□□ -0.95
COL5A1-202ENST00000371820 PIK3IP1Q96FE7 263 aa9.09□□□□□ -0.95
COL5A1-202ENST00000371820 CITED4Q96RK1 184 aa9.09□□□□□ -0.95
COL5A1-202ENST00000371820 LIN7BQ9HAP6 207 aa9.09□□□□□ -0.95
COL5A1-202ENST00000371820 NGBQ9NPG2 151 aa9.09□□□□□ -0.95
COL5A1-202ENST00000371820 GLTPQ9NZD2 209 aa9.09□□□□□ -0.95
COL5A1-202ENST00000371820 MTFP1Q9UDX5 166 aa9.09□□□□□ -0.95
COL5A1-202ENST00000371820 DNHD1Q96M86 4753 aa9.08□□□□□ -0.96
COL5A1-202ENST00000371820 TMED7-TICAM2A0A0A6YYA0 188 aa9.08□□□□□ -0.96
COL5A1-202ENST00000371820 IGHV3-15A0A0B4J1V0 119 aa9.08□□□□□ -0.96
COL5A1-202ENST00000371820 NPIPB13A6NJU9 1138 aa9.08□□□□□ -0.96
COL5A1-202ENST00000371820 DEFB108AA8MXU0 73 aa9.08□□□□□ -0.96
COL5A1-202ENST00000371820 LEUTXA8MZ59 168 aa9.08□□□□□ -0.96
COL5A1-202ENST00000371820 NPIPB4C9JG80 1138 aa9.08□□□□□ -0.96
COL5A1-202ENST00000371820 L7N2F9 121 aa9.08□□□□□ -0.96
COL5A1-202ENST00000371820 SMAD9O15198 467 aaKnown RBP9.08□□□□□ -0.96
COL5A1-202ENST00000371820 PIN1P1O15428 100 aa9.08□□□□□ -0.96
COL5A1-202ENST00000371820 ZNF208O43345 1280 aa9.08□□□□□ -0.96
COL5A1-202ENST00000371820 EIF1BO60739 113 aaKnown RBP9.08□□□□□ -0.96
COL5A1-202ENST00000371820 TSC22D2O75157 780 aa9.08□□□□□ -0.96
COL5A1-202ENST00000371820 ZFPL1O95159 310 aa9.08□□□□□ -0.96
COL5A1-202ENST00000371820 CNOT4O95628 575 aaKnown RBP9.08□□□□□ -0.96
COL5A1-202ENST00000371820 MT-ND4P03905 459 aa9.08□□□□□ -0.96
COL5A1-202ENST00000371820 CD37P11049 281 aa9.08□□□□□ -0.96
COL5A1-202ENST00000371820 AQP2P41181 271 aa9.08□□□□□ -0.96
COL5A1-202ENST00000371820 PTH2RP49190 550 aa9.08□□□□□ -0.96
COL5A1-202ENST00000371820 TAS2R20P59543 309 aa9.08□□□□□ -0.96
COL5A1-202ENST00000371820 ROM1Q03395 351 aa9.08□□□□□ -0.96
COL5A1-202ENST00000371820 PLAURQ03405 335 aa9.08□□□□□ -0.96
COL5A1-202ENST00000371820 LTBQ06643 244 aa9.08□□□□□ -0.96
COL5A1-202ENST00000371820 LGALSLQ3ZCW2 172 aaPredicted RBP9.08□□□□□ -0.96
COL5A1-202ENST00000371820 HES5Q5TA89 166 aa9.08□□□□□ -0.96
COL5A1-202ENST00000371820 ZNF626Q68DY1 528 aa9.08□□□□□ -0.96
COL5A1-202ENST00000371820 SIGIRRQ6IA17 410 aa9.08□□□□□ -0.96
COL5A1-202ENST00000371820 ZNF704Q6ZNC4 412 aaPredicted RBP9.08□□□□□ -0.96
COL5A1-202ENST00000371820 C20orf204Q6ZNR8 217 aa9.08□□□□□ -0.96
COL5A1-202ENST00000371820 KRTAP1-3Q8IUG1 177 aa9.08□□□□□ -0.96
COL5A1-202ENST00000371820 ZNF679Q8IYX0 411 aa9.08□□□□□ -0.96
COL5A1-202ENST00000371820 OR2T35Q8NGX2 323 aa9.08□□□□□ -0.96
COL5A1-202ENST00000371820 OR2G2Q8NGZ5 317 aa9.08□□□□□ -0.96
COL5A1-202ENST00000371820 OR52I2Q8NH67 350 aa9.08□□□□□ -0.96
COL5A1-202ENST00000371820 PIGTQ969N2 578 aa9.08□□□□□ -0.96
COL5A1-202ENST00000371820 MAP6Q96JE9 813 aa9.08□□□□□ -0.96
COL5A1-202ENST00000371820 Q96M85 177 aa9.08□□□□□ -0.96
COL5A1-202ENST00000371820 DHRS9Q9BPW9 319 aa9.08□□□□□ -0.96
COL5A1-202ENST00000371820 PDCD1LG2Q9BQ51 273 aa9.08□□□□□ -0.96
COL5A1-202ENST00000371820 NAA11Q9BSU3 229 aaPredicted RBP9.08□□□□□ -0.96
COL5A1-202ENST00000371820 POTEKPQ9BYX7 375 aa9.08□□□□□ -0.96
COL5A1-202ENST00000371820 SRA1Q9HD15 236 aaKnown RBP9.08□□□□□ -0.96
COL5A1-202ENST00000371820 BEX4Q9NWD9 120 aaPredicted RBP9.08□□□□□ -0.96
COL5A1-202ENST00000371820 SLCO1C1Q9NYB5 712 aa9.08□□□□□ -0.96
COL5A1-202ENST00000371820 OR5V1Q9UGF6 321 aa9.08□□□□□ -0.96
COL5A1-202ENST00000371820 SLC23A1Q9UHI7 598 aa9.08□□□□□ -0.96
COL5A1-202ENST00000371820 IKZF2Q9UKS7 526 aa9.08□□□□□ -0.96
COL5A1-202ENST00000371820 RCE1Q9Y256 329 aa9.08□□□□□ -0.96
COL5A1-202ENST00000371820 TMED7Q9Y3B3 224 aa9.08□□□□□ -0.96
COL5A1-202ENST00000371820 NSD1Q96L73 2696 aaPredicted RBP9.08□□□□□ -0.96
COL5A1-202ENST00000371820 VPS13CQ709C8 3753 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 LOC100289279A0A1B0GTE1 492 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 A0A1W2PPR1 153 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 TMEM72A0PK05 275 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 METTL21EPA6NDL7 271 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 OR6C65A6NJZ3 312 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 OR4C45A6NMZ5 311 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 A8MVM7 634 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 SLC17A2O00624 439 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 SELENOFO60613 162 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 IGHMP01871 453 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 TACR3P29371 465 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 CALCRP30988 508 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 HOXC12P31275 282 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 DCTDP32321 178 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 PSMB10P40306 273 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 OR3A2P47893 321 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 GSK3AP49840 483 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 ZNF81P51508 661 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 CCR6P51684 374 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 RIDAP52758 137 aaKnown RBP9.07□□□□□ -0.96
COL5A1-202ENST00000371820 HCCSP53701 268 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 TAS2R19P59542 299 aa9.07□□□□□ -0.96
COL5A1-202ENST00000371820 RPL27P61353 136 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms