RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 PLEK2Q9NYT0 353 aa11.83□□□□□ -0.52
TNFRSF21-201ENST00000296861 PCDHGA1Q9Y5H4 931 aa11.83□□□□□ -0.52
TNFRSF21-201ENST00000296861 ROS1P08922 2347 aa11.83□□□□□ -0.52
TNFRSF21-201ENST00000296861 PATE4P0C8F1 98 aa11.83□□□□□ -0.52
TNFRSF21-201ENST00000296861 CLDN17P56750 224 aa11.83□□□□□ -0.52
TNFRSF21-201ENST00000296861 UNC119Q13432 240 aa11.83□□□□□ -0.52
TNFRSF21-201ENST00000296861 SLC43A2Q8N370 569 aa11.83□□□□□ -0.52
TNFRSF21-201ENST00000296861 OR1L3Q8NH93 324 aa11.83□□□□□ -0.52
TNFRSF21-201ENST00000296861 MFSD8Q8NHS3 518 aa11.83□□□□□ -0.52
TNFRSF21-201ENST00000296861 THRSPQ92748 146 aa11.83□□□□□ -0.52
TNFRSF21-201ENST00000296861 EFSO43281 561 aa11.82□□□□□ -0.52
TNFRSF21-201ENST00000296861 IGHV3-9P01782 118 aa11.82□□□□□ -0.52
TNFRSF21-201ENST00000296861 CALCRP30988 508 aa11.82□□□□□ -0.52
TNFRSF21-201ENST00000296861 HOXA1P49639 335 aaPredicted RBP11.82□□□□□ -0.52
TNFRSF21-201ENST00000296861 RAET1LQ5VY80 246 aa11.82□□□□□ -0.52
TNFRSF21-201ENST00000296861 OGFOD3Q6PK18 319 aa11.82□□□□□ -0.52
TNFRSF21-201ENST00000296861 FIP1L1Q6UN15 594 aaKnown RBP11.82□□□□□ -0.52
TNFRSF21-201ENST00000296861 RNASE11Q8TAA1 199 aaKnown RBP11.82□□□□□ -0.52
TNFRSF21-201ENST00000296861 SLC22A8Q8TCC7 542 aa11.82□□□□□ -0.52
TNFRSF21-201ENST00000296861 OR10C1Q96KK4 312 aa11.82□□□□□ -0.52
TNFRSF21-201ENST00000296861 GPHA2Q96T91 129 aa11.82□□□□□ -0.52
TNFRSF21-201ENST00000296861 GABRG3Q99928 467 aa11.82□□□□□ -0.52
TNFRSF21-201ENST00000296861 MFRPQ9BY79 579 aa11.82□□□□□ -0.52
TNFRSF21-201ENST00000296861 IGLV1-36A0A0B4J1U3 117 aa11.82□□□□□ -0.52
TNFRSF21-201ENST00000296861 C1orf196B1AJZ1 125 aa11.82□□□□□ -0.52
TNFRSF21-201ENST00000296861 SFTA3P0C7M3 94 aa11.82□□□□□ -0.52
TNFRSF21-201ENST00000296861 KLK2P20151 261 aa11.82□□□□□ -0.52
TNFRSF21-201ENST00000296861 ZBTB25P24278 435 aa11.82□□□□□ -0.52
TNFRSF21-201ENST00000296861 LAP3P28838 519 aa11.82□□□□□ -0.52
TNFRSF21-201ENST00000296861 CD38P28907 300 aa11.82□□□□□ -0.52
TNFRSF21-201ENST00000296861 FHITP49789 147 aa11.82□□□□□ -0.52
TNFRSF21-201ENST00000296861 DAP3P51398 398 aaKnown RBP11.82□□□□□ -0.52
TNFRSF21-201ENST00000296861 SULF2Q8IWU5 870 aa11.82□□□□□ -0.52
TNFRSF21-201ENST00000296861 OR5L1Q8NGL2 311 aa11.82□□□□□ -0.52
TNFRSF21-201ENST00000296861 FNDC9Q8TBE3 224 aa11.82□□□□□ -0.52
TNFRSF21-201ENST00000296861 RXFP4Q8TDU9 374 aa11.82□□□□□ -0.52
TNFRSF21-201ENST00000296861 ZFP57Q9NU63 452 aa11.82□□□□□ -0.52
TNFRSF21-201ENST00000296861 TTRP02766 147 aa11.82□□□□□ -0.52
TNFRSF21-201ENST00000296861 GUSBP08236 651 aa11.82□□□□□ -0.52
TNFRSF21-201ENST00000296861 QDPRP09417 244 aa11.82□□□□□ -0.52
TNFRSF21-201ENST00000296861 MUC1P15941 1255 aaPredicted RBP11.82□□□□□ -0.52
TNFRSF21-201ENST00000296861 PNLIPP16233 465 aa11.82□□□□□ -0.52
TNFRSF21-201ENST00000296861 ADH6P28332 368 aa11.82□□□□□ -0.52
TNFRSF21-201ENST00000296861 OR2AE1Q8NHA4 323 aa11.82□□□□□ -0.52
TNFRSF21-201ENST00000296861 ZNF2Q9BSG1 426 aaPredicted RBP11.82□□□□□ -0.52
TNFRSF21-201ENST00000296861 UQCC1Q9NVA1 299 aa11.82□□□□□ -0.52
TNFRSF21-201ENST00000296861 OBP2AQ9NY56 170 aa11.82□□□□□ -0.52
TNFRSF21-201ENST00000296861 SPRY1O43609 319 aaPredicted RBP11.81□□□□□ -0.52
TNFRSF21-201ENST00000296861 NDUFA2O43678 99 aa11.81□□□□□ -0.52
TNFRSF21-201ENST00000296861 DRD1P21728 446 aa11.81□□□□□ -0.52
TNFRSF21-201ENST00000296861 CX3CR1P49238 355 aa11.81□□□□□ -0.52
TNFRSF21-201ENST00000296861 RGS19P49795 217 aa11.81□□□□□ -0.52
TNFRSF21-201ENST00000296861 SLC25A42Q86VD7 318 aa11.81□□□□□ -0.52
TNFRSF21-201ENST00000296861 STT3BQ8TCJ2 826 aa11.81□□□□□ -0.52
TNFRSF21-201ENST00000296861 SFT2D1Q8WV19 159 aa11.81□□□□□ -0.52
TNFRSF21-201ENST00000296861 PIK3IP1Q96FE7 263 aa11.81□□□□□ -0.52
TNFRSF21-201ENST00000296861 GPX7Q96SL4 187 aaPredicted RBP11.81□□□□□ -0.52
TNFRSF21-201ENST00000296861 GPR173Q9NS66 373 aa11.81□□□□□ -0.52
TNFRSF21-201ENST00000296861 RCL1Q9Y2P8 373 aaKnown RBP11.81□□□□□ -0.52
TNFRSF21-201ENST00000296861 CNOT1A5YKK6 2376 aaKnown RBP11.81□□□□□ -0.52
TNFRSF21-201ENST00000296861 MASP2O00187 686 aa11.81□□□□□ -0.52
TNFRSF21-201ENST00000296861 FCGR2CP31995 323 aa11.81□□□□□ -0.52
TNFRSF21-201ENST00000296861 GABREP78334 506 aa11.81□□□□□ -0.52
TNFRSF21-201ENST00000296861 COL19A1Q14993 1142 aa11.81□□□□□ -0.52
TNFRSF21-201ENST00000296861 TMEM217Q8N7C4 229 aa11.81□□□□□ -0.52
TNFRSF21-201ENST00000296861 MITD1Q8WV92 249 aa11.81□□□□□ -0.52
TNFRSF21-201ENST00000296861 SLCO5A1Q9H2Y9 848 aa11.81□□□□□ -0.52
TNFRSF21-201ENST00000296861 ESRP2Q9H6T0 727 aaKnown RBP11.81□□□□□ -0.52
TNFRSF21-201ENST00000296861 SPACA1Q9HBV2 294 aa11.81□□□□□ -0.52
TNFRSF21-201ENST00000296861 PTPRSQ13332 1948 aa11.81□□□□□ -0.52
TNFRSF21-201ENST00000296861 TLCD2A6NGC4 264 aa11.8□□□□□ -0.52
TNFRSF21-201ENST00000296861 FRG2CA6NGY1 282 aa11.8□□□□□ -0.52
TNFRSF21-201ENST00000296861 H0YIZ8 118 aa11.8□□□□□ -0.52
TNFRSF21-201ENST00000296861 DBHP09172 617 aa11.8□□□□□ -0.52
TNFRSF21-201ENST00000296861 OR8U9P0C7N5 309 aa11.8□□□□□ -0.52
TNFRSF21-201ENST00000296861 ZNF260Q3ZCT1 412 aa11.8□□□□□ -0.52
TNFRSF21-201ENST00000296861 EIF4E3Q8N5X7 224 aaKnown RBP11.8□□□□□ -0.52
TNFRSF21-201ENST00000296861 OR10A2Q9H208 303 aa11.8□□□□□ -0.52
TNFRSF21-201ENST00000296861 FN3KRPQ9HA64 309 aa11.8□□□□□ -0.52
TNFRSF21-201ENST00000296861 SERINC1Q9NRX5 453 aa11.8□□□□□ -0.52
TNFRSF21-201ENST00000296861 MEMO1Q9Y316 297 aa11.8□□□□□ -0.52
TNFRSF21-201ENST00000296861 IGHV3-64DA0A0J9YX35 117 aa11.8□□□□□ -0.52
TNFRSF21-201ENST00000296861 RAMP1O60894 148 aa11.8□□□□□ -0.52
TNFRSF21-201ENST00000296861 B2MP61769 119 aa11.8□□□□□ -0.52
TNFRSF21-201ENST00000296861 CYCSP99999 105 aaKnown RBP11.8□□□□□ -0.52
TNFRSF21-201ENST00000296861 MYBPHQ13203 477 aa11.8□□□□□ -0.52
TNFRSF21-201ENST00000296861 TMEM128Q5BJH2 165 aa11.8□□□□□ -0.52
TNFRSF21-201ENST00000296861 PHF19Q5T6S3 580 aa11.8□□□□□ -0.52
TNFRSF21-201ENST00000296861 RBMS3Q6XE24 437 aaKnown RBP11.8□□□□□ -0.52
TNFRSF21-201ENST00000296861 WDFY1Q8IWB7 410 aa11.8□□□□□ -0.52
TNFRSF21-201ENST00000296861 FAM213BQ8TBF2 198 aa11.8□□□□□ -0.52
TNFRSF21-201ENST00000296861 ST7LQ8TDW4 575 aa11.8□□□□□ -0.52
TNFRSF21-201ENST00000296861 SGK3Q96BR1 496 aa11.8□□□□□ -0.52
TNFRSF21-201ENST00000296861 DDIT4LQ96D03 193 aa11.8□□□□□ -0.52
TNFRSF21-201ENST00000296861 SCARF2Q96GP6 870 aaPredicted RBP11.8□□□□□ -0.52
TNFRSF21-201ENST00000296861 hCG_1809904A0A1W2PP81 198 aa11.8□□□□□ -0.52
TNFRSF21-201ENST00000296861 A0A1W2PR64 198 aa11.8□□□□□ -0.52
TNFRSF21-201ENST00000296861 A0A1W2PRV1 198 aa11.8□□□□□ -0.52
TNFRSF21-201ENST00000296861 DDAH2O95865 285 aa11.8□□□□□ -0.52
TNFRSF21-201ENST00000296861 MT-ATP6P00846 226 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms