RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 IFNA6P05013 189 aa22.07■■□□□ 1.12
ROM1-201ENST00000278833 HOXD11P31277 338 aaPredicted RBP22.07■■□□□ 1.12
ROM1-201ENST00000278833 OTX1P32242 354 aaPredicted RBP22.07■■□□□ 1.12
ROM1-201ENST00000278833 NUP62P37198 522 aaPredicted RBP22.07■■□□□ 1.12
ROM1-201ENST00000278833 IL13RA1P78552 427 aa22.07■■□□□ 1.12
ROM1-201ENST00000278833 CARD17Q5XLA6 110 aa22.07■■□□□ 1.12
ROM1-201ENST00000278833 ARMC10Q8N2F6 343 aa22.07■■□□□ 1.12
ROM1-201ENST00000278833 TMEM185AQ8NFB2 350 aa22.07■■□□□ 1.12
ROM1-201ENST00000278833 OR4K15Q8NH41 348 aa22.07■■□□□ 1.12
ROM1-201ENST00000278833 RAB3CQ96E17 227 aa22.07■■□□□ 1.12
ROM1-201ENST00000278833 NICN1Q9BSH3 213 aa22.07■■□□□ 1.12
ROM1-201ENST00000278833 URM1Q9BTM9 101 aaKnown RBP22.07■■□□□ 1.12
ROM1-201ENST00000278833 PIEZO1Q92508 2521 aa22.06■■□□□ 1.12
ROM1-201ENST00000278833 LOC105371267A0A1B0GV96 52 aa22.06■■□□□ 1.12
ROM1-201ENST00000278833 RNF222A6NCQ9 220 aa22.06■■□□□ 1.12
ROM1-201ENST00000278833 CSN2P05814 226 aa22.06■■□□□ 1.12
ROM1-201ENST00000278833 SFTPDP35247 375 aa22.06■■□□□ 1.12
ROM1-201ENST00000278833 OR3A4PP47883 348 aa22.06■■□□□ 1.12
ROM1-201ENST00000278833 CSNK1A1P48729 337 aa22.06■■□□□ 1.12
ROM1-201ENST00000278833 HYAL4Q2M3T9 481 aa22.06■■□□□ 1.12
ROM1-201ENST00000278833 SLC22A6Q4U2R8 563 aa22.06■■□□□ 1.12
ROM1-201ENST00000278833 PLAC9Q5JTB6 97 aa22.06■■□□□ 1.12
ROM1-201ENST00000278833 ZNF283Q8N7M2 679 aa22.06■■□□□ 1.12
ROM1-201ENST00000278833 INTS12Q96CB8 462 aaKnown RBP22.06■■□□□ 1.12
ROM1-201ENST00000278833 FN3KRPQ9HA64 309 aa22.06■■□□□ 1.12
ROM1-201ENST00000278833 ASCC3Q8N3C0 2202 aaKnown RBP22.06■■□□□ 1.12
ROM1-201ENST00000278833 DMXL1Q9Y485 3027 aa22.05■■□□□ 1.12
ROM1-201ENST00000278833 KANTRA0A1W2PQU2 76 aa22.05■■□□□ 1.12
ROM1-201ENST00000278833 RLN2P04090 185 aa22.05■■□□□ 1.12
ROM1-201ENST00000278833 COX6A1P12074 109 aa22.05■■□□□ 1.12
ROM1-201ENST00000278833 DSCR4P56555 118 aaPredicted RBP22.05■■□□□ 1.12
ROM1-201ENST00000278833 CLDN17P56750 224 aa22.05■■□□□ 1.12
ROM1-201ENST00000278833 HLA-BQ31612 363 aa22.05■■□□□ 1.12
ROM1-201ENST00000278833 GALNT11Q8NCW6 608 aa22.05■■□□□ 1.12
ROM1-201ENST00000278833 TMEM104Q8NE00 496 aa22.05■■□□□ 1.12
ROM1-201ENST00000278833 GJC3Q8NFK1 279 aa22.05■■□□□ 1.12
ROM1-201ENST00000278833 PAQR8Q8TEZ7 354 aa22.05■■□□□ 1.12
ROM1-201ENST00000278833 PPP1R1CQ8WVI7 109 aa22.05■■□□□ 1.12
ROM1-201ENST00000278833 ST8SIA4Q92187 359 aa22.05■■□□□ 1.12
ROM1-201ENST00000278833 LINC00052Q96N35 136 aa22.05■■□□□ 1.12
ROM1-201ENST00000278833 PDCD10Q9BUL8 212 aa22.05■■□□□ 1.12
ROM1-201ENST00000278833 ZNF416Q9BWM5 594 aa22.05■■□□□ 1.12
ROM1-201ENST00000278833 GLS2Q9UI32 602 aa22.05■■□□□ 1.12
ROM1-201ENST00000278833 TRBV6-7A0A0A0MS04 114 aa22.05■■□□□ 1.12
ROM1-201ENST00000278833 DNPH1O43598 174 aa22.05■■□□□ 1.12
ROM1-201ENST00000278833 MPIG6BO95866 241 aa22.05■■□□□ 1.12
ROM1-201ENST00000278833 NAT2P11245 290 aa22.05■■□□□ 1.12
ROM1-201ENST00000278833 LIFP15018 202 aa22.05■■□□□ 1.12
ROM1-201ENST00000278833 ENDOGQ14249 297 aaKnown RBP22.05■■□□□ 1.12
ROM1-201ENST00000278833 FAM57BQ71RH2 274 aa22.05■■□□□ 1.12
ROM1-201ENST00000278833 GLRX5Q86SX6 157 aa22.05■■□□□ 1.12
ROM1-201ENST00000278833 PEG10Q86TG7 708 aaKnown RBP22.05■■□□□ 1.12
ROM1-201ENST00000278833 COMMD2Q86X83 199 aa22.05■■□□□ 1.12
ROM1-201ENST00000278833 TMEM123Q8N131 208 aa22.05■■□□□ 1.12
ROM1-201ENST00000278833 TERB2Q8NHR7 220 aa22.05■■□□□ 1.12
ROM1-201ENST00000278833 NABP1Q96AH0 204 aa22.05■■□□□ 1.12
ROM1-201ENST00000278833 CDC6Q99741 560 aa22.05■■□□□ 1.12
ROM1-201ENST00000278833 NAA11Q9BSU3 229 aaPredicted RBP22.05■■□□□ 1.12
ROM1-201ENST00000278833 SOX7Q9BT81 388 aa22.05■■□□□ 1.12
ROM1-201ENST00000278833 SPEF1Q9Y4P9 236 aa22.05■■□□□ 1.12
ROM1-201ENST00000278833 IGKV1-9A0A0C4DH69 117 aa22.04■■□□□ 1.12
ROM1-201ENST00000278833 APOC1P02654 83 aa22.04■■□□□ 1.12
ROM1-201ENST00000278833 UMODP07911 640 aa22.04■■□□□ 1.12
ROM1-201ENST00000278833 HCKP08631 526 aa22.04■■□□□ 1.12
ROM1-201ENST00000278833 HOXD4P09016 255 aaPredicted RBP22.04■■□□□ 1.12
ROM1-201ENST00000278833 TMEM50BP56557 158 aa22.04■■□□□ 1.12
ROM1-201ENST00000278833 ARL6IP1Q15041 203 aa22.04■■□□□ 1.12
ROM1-201ENST00000278833 MICBQ29980 383 aa22.04■■□□□ 1.12
ROM1-201ENST00000278833 OR2I1PQ8NGU4 316 aa22.04■■□□□ 1.12
ROM1-201ENST00000278833 PP6455Q8WZ26 134 aa22.04■■□□□ 1.12
ROM1-201ENST00000278833 FAM71F1Q96KD3 344 aaPredicted RBP22.04■■□□□ 1.12
ROM1-201ENST00000278833 SCGB3A2Q96PL1 93 aa22.04■■□□□ 1.12
ROM1-201ENST00000278833 NMES1Q9C002 83 aa22.04■■□□□ 1.12
ROM1-201ENST00000278833 SHARPINQ9H0F6 387 aa22.04■■□□□ 1.12
ROM1-201ENST00000278833 KIAA1549Q9HCM3 1950 aa22.04■■□□□ 1.12
ROM1-201ENST00000278833 D6RAR5 112 aa22.03■■□□□ 1.12
ROM1-201ENST00000278833 NTN3O00634 580 aaPredicted RBP22.03■■□□□ 1.12
ROM1-201ENST00000278833 SPDEFO95238 335 aa22.03■■□□□ 1.12
ROM1-201ENST00000278833 PPA1Q15181 289 aa22.03■■□□□ 1.12
ROM1-201ENST00000278833 CRIP3Q6Q6R5 217 aa22.03■■□□□ 1.12
ROM1-201ENST00000278833 MOB3CQ70IA8 216 aa22.03■■□□□ 1.12
ROM1-201ENST00000278833 SLC16A14Q7RTX9 510 aa22.03■■□□□ 1.12
ROM1-201ENST00000278833 RNF144BQ7Z419 303 aa22.03■■□□□ 1.12
ROM1-201ENST00000278833 LHFPL1Q86WI0 220 aa22.03■■□□□ 1.12
ROM1-201ENST00000278833 PNLDC1Q8NA58 520 aaKnown RBP22.03■■□□□ 1.12
ROM1-201ENST00000278833 IFI44Q8TCB0 444 aa22.03■■□□□ 1.12
ROM1-201ENST00000278833 TM2D1Q9BX74 207 aa22.03■■□□□ 1.12
ROM1-201ENST00000278833 PROK2Q9HC23 129 aa22.03■■□□□ 1.12
ROM1-201ENST00000278833 GPR132Q9UNW8 380 aa22.03■■□□□ 1.12
ROM1-201ENST00000278833 SOCS1O15524 211 aa22.03■■□□□ 1.12
ROM1-201ENST00000278833 SCO1O75880 301 aa22.03■■□□□ 1.12
ROM1-201ENST00000278833 OPN1LWP04000 364 aa22.03■■□□□ 1.12
ROM1-201ENST00000278833 SLC2A1P11166 492 aa22.03■■□□□ 1.12
ROM1-201ENST00000278833 KLK2P20151 261 aa22.03■■□□□ 1.12
ROM1-201ENST00000278833 FPR2P25090 351 aa22.03■■□□□ 1.12
ROM1-201ENST00000278833 TMEM128Q5BJH2 165 aa22.03■■□□□ 1.12
ROM1-201ENST00000278833 PRAMEF20Q5VT98 475 aa22.03■■□□□ 1.12
ROM1-201ENST00000278833 SLC38A6Q8IZM9 456 aa22.03■■□□□ 1.12
ROM1-201ENST00000278833 PXT1Q8NFP0 134 aa22.03■■□□□ 1.12
ROM1-201ENST00000278833 TMEM41AQ96HV5 264 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms