RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 ZNF676Q8N7Q3 588 aa13.98□□□□□ -0.17
CTDSP1-201ENST00000273062 ZDHHC22Q8N966 263 aa13.98□□□□□ -0.17
CTDSP1-201ENST00000273062 NUP43Q8NFH3 380 aa13.98□□□□□ -0.17
CTDSP1-201ENST00000273062 RSC1A1Q92681 617 aa13.98□□□□□ -0.17
CTDSP1-201ENST00000273062 RASD2Q96D21 266 aa13.98□□□□□ -0.17
CTDSP1-201ENST00000273062 ELOVL1Q9BW60 279 aa13.98□□□□□ -0.17
CTDSP1-201ENST00000273062 RFNGQ9Y644 331 aa13.98□□□□□ -0.17
CTDSP1-201ENST00000273062 HSPA12AO43301 675 aa13.97□□□□□ -0.17
CTDSP1-201ENST00000273062 PLRG1O43660 514 aaKnown RBP13.97□□□□□ -0.17
CTDSP1-201ENST00000273062 DIRAS3O95661 229 aa13.97□□□□□ -0.17
CTDSP1-201ENST00000273062 FUT3P21217 361 aa13.97□□□□□ -0.17
CTDSP1-201ENST00000273062 PEBP1P30086 187 aaKnown RBP13.97□□□□□ -0.17
CTDSP1-201ENST00000273062 FCGR2CP31995 323 aa13.97□□□□□ -0.17
CTDSP1-201ENST00000273062 BCL6P41182 706 aa13.97□□□□□ -0.17
CTDSP1-201ENST00000273062 SLC25A1P53007 311 aa13.97□□□□□ -0.17
CTDSP1-201ENST00000273062 CLEC18BQ6UXF7 455 aa13.97□□□□□ -0.17
CTDSP1-201ENST00000273062 OR13D1Q8NGV5 346 aa13.97□□□□□ -0.17
CTDSP1-201ENST00000273062 PITPNC1Q9UKF7 332 aa13.97□□□□□ -0.17
CTDSP1-201ENST00000273062 NUP210LQ5VU65 1888 aa13.97□□□□□ -0.17
CTDSP1-201ENST00000273062 EML5Q05BV3 1969 aa13.97□□□□□ -0.17
CTDSP1-201ENST00000273062 SLC17A2O00624 439 aa13.97□□□□□ -0.17
CTDSP1-201ENST00000273062 HSD17B6O14756 317 aa13.97□□□□□ -0.17
CTDSP1-201ENST00000273062 CCKBRP32239 447 aa13.97□□□□□ -0.17
CTDSP1-201ENST00000273062 RD3Q7Z3Z2 195 aa13.97□□□□□ -0.17
CTDSP1-201ENST00000273062 C17orf78Q8N4C9 275 aa13.97□□□□□ -0.17
CTDSP1-201ENST00000273062 CCL4L1Q8NHW4 92 aa13.97□□□□□ -0.17
CTDSP1-201ENST00000273062 ZNF417Q8TAU3 575 aa13.97□□□□□ -0.17
CTDSP1-201ENST00000273062 SRPK3Q9UPE1 567 aa13.97□□□□□ -0.17
CTDSP1-201ENST00000273062 SLC17A4Q9Y2C5 497 aa13.97□□□□□ -0.17
CTDSP1-201ENST00000273062 MED31Q9Y3C7 131 aa13.97□□□□□ -0.17
CTDSP1-201ENST00000273062 ARID1BQ8NFD5 2236 aaPredicted RBP13.97□□□□□ -0.17
CTDSP1-201ENST00000273062 DFFBO76075 338 aa13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 KLF8O95600 359 aaPredicted RBP13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 PRH1P02810 166 aa13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 ZNF708P17019 499 aa13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 RPL12P30050 165 aaKnown RBP13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 RAB28P51157 221 aa13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 SCAND1P57086 179 aa13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 SLC35A1P78382 337 aa13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 OR5I1Q13606 314 aa13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 BATFQ16520 125 aa13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 KCNMB1Q16558 191 aa13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 SLC22A25Q6T423 547 aa13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 TRAPPC6BQ86SZ2 158 aa13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 ZNF573Q86YE8 665 aa13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 POC1AQ8NBT0 407 aa13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 OR1N1Q8NGS0 311 aa13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 OR2L8Q8NGY9 312 aa13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 PPP1R14AQ96A00 147 aa13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 WFIKKN1Q96NZ8 548 aa13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 URM1Q9BTM9 101 aaKnown RBP13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 APOOQ9BUR5 198 aa13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 S1PR5Q9H228 398 aa13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 SLC26A1Q9H2B4 701 aa13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 DNAJC4Q9NNZ3 241 aa13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 SLC17A5Q9NRA2 495 aa13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 MRPS18BQ9Y676 258 aaKnown RBP13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 TMEM210A6NLX4 147 aa13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 K7EPK0 472 aa13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 CDC14BO60729 498 aa13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 ABHD16AO95870 558 aa13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 SOX8P57073 446 aa13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 PRPS1P60891 318 aa13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 PRDX1Q06830 199 aaKnown RBP13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 DMWDQ09019 674 aa13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 GLYATL3Q5SZD4 288 aa13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 ABLIM2Q6H8Q1 611 aa13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 KIRREL2Q6UWL6 708 aa13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 SLC35E3Q7Z769 313 aa13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 FAM71E2Q8N5Q1 922 aa13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 CSNK1A1LQ8N752 337 aa13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 NPEPL1Q8NDH3 523 aa13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 MCHR2Q969V1 340 aa13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 ANKRD9Q96BM1 317 aaPredicted RBP13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 SERINC2Q96SA4 455 aa13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 C5orf66Q9H5L9 145 aa13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 METTL8Q9H825 291 aaKnown RBP13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 FBXO34Q9NWN3 711 aa13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 MYOTQ9UBF9 498 aa13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 SERTAD3Q9UJW9 196 aa13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 MTCH2Q9Y6C9 303 aa13.96□□□□□ -0.17
CTDSP1-201ENST00000273062 TAAR5O14804 337 aa13.95□□□□□ -0.18
CTDSP1-201ENST00000273062 GUSBP08236 651 aa13.95□□□□□ -0.18
CTDSP1-201ENST00000273062 HOXB2P14652 356 aa13.95□□□□□ -0.18
CTDSP1-201ENST00000273062 TBPP20226 339 aa13.95□□□□□ -0.18
CTDSP1-201ENST00000273062 NTSR1P30989 418 aa13.95□□□□□ -0.18
CTDSP1-201ENST00000273062 S100A7P31151 101 aa13.95□□□□□ -0.18
CTDSP1-201ENST00000273062 SLC6A6P31641 620 aa13.95□□□□□ -0.18
CTDSP1-201ENST00000273062 SUPT4H1P63272 117 aaKnown RBP13.95□□□□□ -0.18
CTDSP1-201ENST00000273062 FAM3AP98173 230 aa13.95□□□□□ -0.18
CTDSP1-201ENST00000273062 MRPL2Q5T653 305 aaKnown RBP13.95□□□□□ -0.18
CTDSP1-201ENST00000273062 PRAMEF8Q5VWM4 474 aa13.95□□□□□ -0.18
CTDSP1-201ENST00000273062 PRAMEF7Q5VXH5 474 aa13.95□□□□□ -0.18
CTDSP1-201ENST00000273062 FAM166AQ6J272 317 aa13.95□□□□□ -0.18
CTDSP1-201ENST00000273062 FAHD2BQ6P2I3 314 aaPredicted RBP13.95□□□□□ -0.18
CTDSP1-201ENST00000273062 TMEM184AQ6ZMB5 413 aa13.95□□□□□ -0.18
CTDSP1-201ENST00000273062 ZNF705AQ6ZN79 300 aaPredicted RBP13.95□□□□□ -0.18
CTDSP1-201ENST00000273062 PLPP5Q8NEB5 264 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms