RNA–Protein interactions for RNA: YPR047W

MSF1, Transcript of Mitochondrial phenylalanyl-tRNA synthetase, yeastyeast

Gene MSF1, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSF1YPR047W MRM1P25270 412 aa10.99□□□□□ -0.65
MSF1YPR047W SCJ1P25303 377 aa10.99□□□□□ -0.65
MSF1YPR047W ECM32P32644 1121 aaKnown RBP10.99□□□□□ -0.65
MSF1YPR047W NEM1P38757 446 aa10.99□□□□□ -0.65
MSF1YPR047W CTM1P38818 585 aa10.99□□□□□ -0.65
MSF1YPR047W RAD55P38953 406 aa10.99□□□□□ -0.65
MSF1YPR047W YGR237CP50089 785 aa10.99□□□□□ -0.65
MSF1YPR047W GCN5Q03330 439 aa10.99□□□□□ -0.65
MSF1YPR047W COG4Q06096 861 aa10.99□□□□□ -0.65
MSF1YPR047W YDL206WQ12424 762 aa10.99□□□□□ -0.65
MSF1YPR047W FMP27Q06179 2628 aa10.99□□□□□ -0.65
MSF1YPR047W NUP60P39705 539 aa10.98□□□□□ -0.65
MSF1YPR047W SBE2P42223 864 aaKnown RBP10.98□□□□□ -0.65
MSF1YPR047W MFB1Q04922 465 aa10.98□□□□□ -0.65
MSF1YPR047W SAM3Q08986 587 aa10.98□□□□□ -0.65
MSF1YPR047W MPD2Q99316 277 aa10.98□□□□□ -0.65
MSF1YPR047W HOM2P13663 365 aaKnown RBP10.97□□□□□ -0.65
MSF1YPR047W VBA3P25594 458 aa10.97□□□□□ -0.65
MSF1YPR047W VBA5P36172 582 aa10.97□□□□□ -0.65
MSF1YPR047W FMO1P38866 432 aa10.97□□□□□ -0.65
MSF1YPR047W LSB3P43603 459 aaKnown RBP10.97□□□□□ -0.65
MSF1YPR047W IMP4P53941 290 aaKnown RBP10.97□□□□□ -0.65
MSF1YPR047W PPM1Q04081 328 aa10.97□□□□□ -0.65
MSF1YPR047W HAA1Q12753 694 aaKnown RBP10.97□□□□□ -0.65
MSF1YPR047W SAT4P25333 603 aaKnown RBP10.96□□□□□ -0.65
MSF1YPR047W AVT2P39981 480 aa10.96□□□□□ -0.65
MSF1YPR047W CHS6P40955 746 aa10.96□□□□□ -0.65
MSF1YPR047W AIP1P46680 615 aaKnown RBP10.96□□□□□ -0.65
MSF1YPR047W GUF1P46943 645 aa10.96□□□□□ -0.65
MSF1YPR047W RSM26P47141 266 aa10.96□□□□□ -0.65
MSF1YPR047W LSP1Q12230 341 aaKnown RBP10.96□□□□□ -0.65
MSF1YPR047W ECM3Q99252 613 aa10.96□□□□□ -0.65
MSF1YPR047W CET1O13297 549 aaPredicted RBP10.95□□□□□ -0.66
MSF1YPR047W KEX1P09620 729 aa10.95□□□□□ -0.66
MSF1YPR047W LRE1P25579 583 aaKnown RBP10.95□□□□□ -0.66
MSF1YPR047W PDC6P26263 563 aaKnown RBP10.95□□□□□ -0.66
MSF1YPR047W DAL1P32375 460 aa10.95□□□□□ -0.66
MSF1YPR047W CDC11P32458 415 aa10.95□□□□□ -0.66
MSF1YPR047W YBR225WP38321 900 aa10.95□□□□□ -0.66
MSF1YPR047W CAF120P53836 1060 aa10.95□□□□□ -0.66
MSF1YPR047W MTD1Q02046 320 aaKnown RBP10.95□□□□□ -0.66
MSF1YPR047W YML053CQ04978 212 aa10.95□□□□□ -0.66
MSF1YPR047W ECM22Q05958 814 aaPredicted RBP10.95□□□□□ -0.66
MSF1YPR047W YPR084WQ06821 456 aa10.95□□□□□ -0.66
MSF1YPR047W YAP7Q08182 245 aa10.95□□□□□ -0.66
MSF1YPR047W NBP2Q12163 236 aa10.95□□□□□ -0.66
MSF1YPR047W DSS4P32601 143 aa10.94□□□□□ -0.66
MSF1YPR047W NOP4P37838 685 aaKnown RBP10.94□□□□□ -0.66
MSF1YPR047W FHL1P39521 936 aa10.94□□□□□ -0.66
MSF1YPR047W AI5_BETAQ9ZZX0 354 aa10.94□□□□□ -0.66
MSF1YPR047W GPI10P30777 616 aa10.93□□□□□ -0.66
MSF1YPR047W YIL161WP40449 235 aaKnown RBP10.93□□□□□ -0.66
MSF1YPR047W VPS70P47161 811 aa10.93□□□□□ -0.66
MSF1YPR047W UBP3Q01477 912 aaKnown RBP RIP-Chip data10.93□□□□□ -0.66not detected
MSF1YPR047W YLR297WQ05899 129 aa10.93□□□□□ -0.66
MSF1YPR047W ETT1Q08421 412 aaKnown RBP10.93□□□□□ -0.66
MSF1YPR047W APC11Q12157 165 aa10.93□□□□□ -0.66
MSF1YPR047W APL1P27351 700 aa10.92□□□□□ -0.66
MSF1YPR047W DOT6P40059 670 aaKnown RBP10.92□□□□□ -0.66
MSF1YPR047W EBS1Q03466 884 aaKnown RBP10.92□□□□□ -0.66
MSF1YPR047W DDC1Q08949 612 aa10.92□□□□□ -0.66
MSF1YPR047W MSB2P32334 1306 aa10.92□□□□□ -0.66
MSF1YPR047W XRS2P33301 854 aa10.92□□□□□ -0.66
MSF1YPR047W GGA2P38817 585 aaKnown RBP10.92□□□□□ -0.66
MSF1YPR047W CDC1P40986 491 aa10.92□□□□□ -0.66
MSF1YPR047W YGL036WP53185 909 aaPredicted RBP10.92□□□□□ -0.66
MSF1YPR047W DRN1P53255 507 aaKnown RBP10.92□□□□□ -0.66
MSF1YPR047W NIS1P53939 407 aa10.92□□□□□ -0.66
MSF1YPR047W CSR1Q06705 408 aaKnown RBP10.92□□□□□ -0.66
MSF1YPR047W TRE1Q08919 783 aa10.92□□□□□ -0.66
MSF1YPR047W CDC37P06101 506 aaKnown RBP10.91□□□□□ -0.66
MSF1YPR047W DAL2P25335 343 aa10.91□□□□□ -0.66
MSF1YPR047W MRC1P25588 1096 aa10.91□□□□□ -0.66
MSF1YPR047W MSH2P25847 964 aa10.91□□□□□ -0.66
MSF1YPR047W SWE1P32944 819 aa10.91□□□□□ -0.66
MSF1YPR047W PTC3P34221 468 aaKnown RBP10.91□□□□□ -0.66
MSF1YPR047W ATG12P38316 186 aa10.91□□□□□ -0.66
MSF1YPR047W CIR1P42940 261 aa10.91□□□□□ -0.66
MSF1YPR047W MND1P53102 219 aa10.91□□□□□ -0.66
MSF1YPR047W SEG1Q04279 960 aa10.91□□□□□ -0.66
MSF1YPR047W SPO75Q07798 868 aa10.91□□□□□ -0.66
MSF1YPR047W RCL1Q08096 367 aaPredicted RBP10.91□□□□□ -0.66
MSF1YPR047W FLC1Q08967 793 aa10.91□□□□□ -0.66
MSF1YPR047W CSG2P35206 410 aa10.9□□□□□ -0.66
MSF1YPR047W SPT23P35210 1082 aa10.9□□□□□ -0.66
MSF1YPR047W YMC2P38087 329 aa10.9□□□□□ -0.66
MSF1YPR047W EFM2P38347 419 aa10.9□□□□□ -0.66
MSF1YPR047W RSM25P40496 264 aa10.9□□□□□ -0.66
MSF1YPR047W PFD1P46988 109 aa10.9□□□□□ -0.66
MSF1YPR047W TOF2Q02208 771 aa10.9□□□□□ -0.66
MSF1YPR047W GFD1Q04839 188 aaKnown RBP10.9□□□□□ -0.66
MSF1YPR047W TRS33Q99394 268 aa10.9□□□□□ -0.66
MSF1YPR047W RPC25P35718 212 aa10.89□□□□□ -0.67
MSF1YPR047W ADE17P38009 592 aaKnown RBP10.89□□□□□ -0.67
MSF1YPR047W TIF5P38431 405 aaKnown RBP10.89□□□□□ -0.67
MSF1YPR047W NMD3P38861 518 aaKnown RBP10.89□□□□□ -0.67
MSF1YPR047W VTC4P47075 721 aa10.89□□□□□ -0.67
MSF1YPR047W CWC24P53769 259 aa10.89□□□□□ -0.67
MSF1YPR047W LPX1Q12405 387 aaKnown RBP10.89□□□□□ -0.67
MSF1YPR047W SEN1Q00416 2231 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 5,963 RNA–protein pairs in 102.8 ms