RNA–Protein interactions for RNA: YPL260W

YPL260W, Transcript of Putative substrate of cAMP-dependent protein kinase (PKA), yeast

Gene YPL260W, Length 1,656 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPL260W	YPL260W	CKB1	P43639	278 aa		4.63	□□□□□ -1.67
YPL260W	YPL260W	BIR1	P47134	954 aa		4.63	□□□□□ -1.67
YPL260W	YPL260W	HGH1	P48362	394 aa	Known RBP	4.63	□□□□□ -1.67
YPL260W	YPL260W	GNP1	P48813	663 aa		4.63	□□□□□ -1.67
YPL260W	YPL260W	GPI8	P49018	411 aa		4.63	□□□□□ -1.67
YPL260W	YPL260W	PEX21	P50091	288 aa		4.63	□□□□□ -1.67
YPL260W	YPL260W	CWC25	P53854	179 aa	Known RBP	4.63	□□□□□ -1.67
YPL260W	YPL260W	DMA2	P53924	522 aa		4.63	□□□□□ -1.67
YPL260W	YPL260W	IMP4	P53941	290 aa	Known RBP	4.63	□□□□□ -1.67
YPL260W	YPL260W	ORC4	P54791	529 aa		4.63	□□□□□ -1.67
YPL260W	YPL260W	MEC3	Q02574	474 aa		4.63	□□□□□ -1.67
YPL260W	YPL260W	ISU1	Q03020	165 aa		4.63	□□□□□ -1.67
YPL260W	YPL260W	RNH1	Q04740	348 aa		4.63	□□□□□ -1.67
YPL260W	YPL260W	PHM6	Q05637	104 aa		4.63	□□□□□ -1.67
YPL260W	YPL260W	ENT2	Q05785	613 aa		4.63	□□□□□ -1.67
YPL260W	YPL260W	DXO1	Q06349	442 aa		4.63	□□□□□ -1.67
YPL260W	YPL260W	YDL114W	Q07530	308 aa		4.63	□□□□□ -1.67
YPL260W	YPL260W	NCA2	Q12374	616 aa		4.63	□□□□□ -1.67
YPL260W	YPL260W	CYB2	P00175	591 aa		4.62	□□□□□ -1.67
YPL260W	YPL260W	RPL6B	P05739	176 aa	Known RBP	4.62	□□□□□ -1.67
YPL260W	YPL260W	SIR3	P06701	978 aa		4.62	□□□□□ -1.67
YPL260W	YPL260W	RAP1	P11938	827 aa		4.62	□□□□□ -1.67
YPL260W	YPL260W	TRM1	P15565	570 aa	Known RBP	4.62	□□□□□ -1.67
YPL260W	YPL260W	KAR2	P16474	682 aa	Known RBP	4.62	□□□□□ -1.67
YPL260W	YPL260W	RAD57	P25301	460 aa		4.62	□□□□□ -1.67
YPL260W	YPL260W	GCD7	P32502	381 aa	Predicted RBP	4.62	□□□□□ -1.67
YPL260W	YPL260W	AFR1	P33304	620 aa		4.62	□□□□□ -1.67
YPL260W	YPL260W	AAP1	P37898	856 aa	Known RBP	4.62	□□□□□ -1.67
YPL260W	YPL260W	SEC31	P38968	1273 aa	Known RBP	4.62	□□□□□ -1.67
YPL260W	YPL260W	MNT3	P40549	630 aa		4.62	□□□□□ -1.67
YPL260W	YPL260W	PAC11	P40960	533 aa		4.62	□□□□□ -1.67
YPL260W	YPL260W	SBE2	P42223	864 aa	Known RBP	4.62	□□□□□ -1.67
YPL260W	YPL260W	BRE2	P43132	505 aa		4.62	□□□□□ -1.67
YPL260W	YPL260W	SWP82	P43554	623 aa		4.62	□□□□□ -1.67
YPL260W	YPL260W	SRB7	P47822	140 aa		4.62	□□□□□ -1.67
YPL260W	YPL260W	TRF5	P48561	642 aa	Known RBP	4.62	□□□□□ -1.67
YPL260W	YPL260W	ZIP2	P53061	704 aa		4.62	□□□□□ -1.67
YPL260W	YPL260W	COS6	P53344	381 aa		4.62	□□□□□ -1.67
YPL260W	YPL260W	ARC35	P53731	342 aa	Known RBP	4.62	□□□□□ -1.67
YPL260W	YPL260W	TAF9	Q05027	157 aa		4.62	□□□□□ -1.67
YPL260W	YPL260W	HCR1	Q05775	265 aa	Known RBP	4.62	□□□□□ -1.67
YPL260W	YPL260W	ATG38	Q05789	226 aa	Known RBP	4.62	□□□□□ -1.67
YPL260W	YPL260W	VPS36	Q06696	566 aa		4.62	□□□□□ -1.67
YPL260W	YPL260W	YEH2	Q07950	538 aa		4.62	□□□□□ -1.67
YPL260W	YPL260W	DIS3	Q08162	1001 aa	Known RBP	4.62	□□□□□ -1.67
YPL260W	YPL260W	NEW1	Q08972	1196 aa	Known RBP	4.62	□□□□□ -1.67
YPL260W	YPL260W	RIB2	Q12362	591 aa	Known RBP	4.62	□□□□□ -1.67
YPL260W	YPL260W	EMP46	Q12396	444 aa		4.62	□□□□□ -1.67
YPL260W	YPL260W	PYC1	P11154	1178 aa	Known RBP	4.61	□□□□□ -1.67
YPL260W	YPL260W	PGI1	P12709	554 aa	Known RBP	4.61	□□□□□ -1.67
YPL260W	YPL260W	VMA2	P16140	517 aa	Known RBP	4.61	□□□□□ -1.67
YPL260W	YPL260W	APN1	P22936	367 aa		4.61	□□□□□ -1.67
YPL260W	YPL260W	VPS3	P23643	1011 aa		4.61	□□□□□ -1.67
YPL260W	YPL260W	SPS22	P25380	463 aa		4.61	□□□□□ -1.67
YPL260W	YPL260W	ADY2	P25613	283 aa		4.61	□□□□□ -1.67
YPL260W	YPL260W	ITR1	P30605	584 aa		4.61	□□□□□ -1.67
YPL260W	YPL260W	TPS2	P31688	896 aa	Known RBP	4.61	□□□□□ -1.67
YPL260W	YPL260W	PXA2	P34230	853 aa		4.61	□□□□□ -1.67
YPL260W	YPL260W	AST1	P35183	429 aa		4.61	□□□□□ -1.67
YPL260W	YPL260W	MAK5	P38112	773 aa	Predicted RBP	4.61	□□□□□ -1.67
YPL260W	YPL260W	BOI2	P39969	1040 aa		4.61	□□□□□ -1.67
YPL260W	YPL260W	FMP33	P46998	180 aa		4.61	□□□□□ -1.67
YPL260W	YPL260W	ATP22	P50273	684 aa	Predicted RBP	4.61	□□□□□ -1.67
YPL260W	YPL260W	COG2	P53271	262 aa		4.61	□□□□□ -1.67
YPL260W	YPL260W	SLT2	Q00772	484 aa		4.61	□□□□□ -1.67
YPL260W	YPL260W	ABZ2	Q03266	374 aa		4.61	□□□□□ -1.67
YPL260W	YPL260W	CWC21	Q03375	135 aa	Known RBP	4.61	□□□□□ -1.67
YPL260W	YPL260W	UTP5	Q04177	643 aa	Known RBP	4.61	□□□□□ -1.67
YPL260W	YPL260W	GFD1	Q04839	188 aa	Known RBP	4.61	□□□□□ -1.67
YPL260W	YPL260W	DON1	Q05610	365 aa		4.61	□□□□□ -1.67
YPL260W	YPL260W	COA4	Q05809	96 aa		4.61	□□□□□ -1.67
YPL260W	YPL260W	DTD1	Q07648	150 aa	Known RBP	4.61	□□□□□ -1.67
YPL260W	YPL260W	VHS3	Q08438	674 aa		4.61	□□□□□ -1.67
YPL260W	YPL260W	VPS54	Q12071	889 aa		4.61	□□□□□ -1.67
YPL260W	YPL260W	BAG7	Q12128	409 aa		4.61	□□□□□ -1.67
YPL260W	YPL260W	SNU23	Q12368	194 aa	Predicted RBP	4.61	□□□□□ -1.67
YPL260W	YPL260W	CDC19	P00549	500 aa	Known RBP	4.61	□□□□□ -1.67
YPL260W	YPL260W	ATP6	P00854	259 aa		4.61	□□□□□ -1.67
YPL260W	YPL260W	ARG4	P04076	463 aa	Predicted RBP	4.61	□□□□□ -1.67
YPL260W	YPL260W	SSB1	P11484	613 aa	Known RBP	4.61	□□□□□ -1.67
YPL260W	YPL260W	KSS1	P14681	368 aa		4.61	□□□□□ -1.67
YPL260W	YPL260W	HNM1	P19807	563 aa		4.61	□□□□□ -1.67
YPL260W	YPL260W	ISY1	P21374	235 aa	Predicted RBP	4.61	□□□□□ -1.67
YPL260W	YPL260W	ILV6	P25605	309 aa	Known RBP	4.61	□□□□□ -1.67
YPL260W	YPL260W	CRM1	P30822	1084 aa	Known RBP	4.61	□□□□□ -1.67
YPL260W	YPL260W	EUG1	P32474	517 aa		4.61	□□□□□ -1.67
YPL260W	YPL260W	YME1	P32795	747 aa		4.61	□□□□□ -1.67
YPL260W	YPL260W	LRG1	P35688	1017 aa		4.61	□□□□□ -1.67
YPL260W	YPL260W	TPO5	P36029	618 aa		4.61	□□□□□ -1.67
YPL260W	YPL260W	SET3	P36124	751 aa		4.61	□□□□□ -1.67
YPL260W	YPL260W	GLG1	P36143	616 aa		4.61	□□□□□ -1.67
YPL260W	YPL260W	MRPL17	P36528	281 aa		4.61	□□□□□ -1.67
YPL260W	YPL260W	ADE17	P38009	592 aa	Known RBP	4.61	□□□□□ -1.67
YPL260W	YPL260W	YBR062C	P38239	180 aa		4.61	□□□□□ -1.67
YPL260W	YPL260W	ZRG8	P40021	1076 aa		4.61	□□□□□ -1.67
YPL260W	YPL260W	SSB2	P40150	613 aa	Known RBP	4.61	□□□□□ -1.67
YPL260W	YPL260W	RIC1	P40395	1056 aa		4.61	□□□□□ -1.67
YPL260W	YPL260W	SNZ3	P43545	298 aa		4.61	□□□□□ -1.67
YPL260W	YPL260W	PAN2	P53010	1115 aa	Predicted RBP	4.61	□□□□□ -1.67
YPL260W	YPL260W	SNZ2	P53824	298 aa		4.61	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 70.1 ms