RNA–Protein interactions for RNA: YPL147W

PXA1, Transcript of Subunit of a heterodimeric peroxisomal ABC transport complex, yeast

Gene PXA1, Length 2,613 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PXA1	YPL147W	COP1	P53622	1201 aa	Known RBP	5.15	□□□□□ -1.59
PXA1	YPL147W	TFB2	Q02939	513 aa		5.15	□□□□□ -1.59
PXA1	YPL147W	PEX25	Q02969	394 aa		5.15	□□□□□ -1.59
PXA1	YPL147W	KRE28	Q04431	385 aa		5.15	□□□□□ -1.59
PXA1	YPL147W	NTG2	Q08214	380 aa		5.15	□□□□□ -1.59
PXA1	YPL147W	FAL1	Q12099	399 aa	Known RBP	5.15	□□□□□ -1.59
PXA1	YPL147W	MIP1	P15801	1254 aa		5.14	□□□□□ -1.59
PXA1	YPL147W	YPK2	P18961	677 aa		5.14	□□□□□ -1.59
PXA1	YPL147W	PRP5	P21372	849 aa	Predicted RBP	5.14	□□□□□ -1.59
PXA1	YPL147W	OSM1	P21375	501 aa	Known RBP	5.14	□□□□□ -1.59
PXA1	YPL147W	MEI4	P29467	408 aa		5.14	□□□□□ -1.59
PXA1	YPL147W	MGM101	P32787	269 aa	Known RBP	5.14	□□□□□ -1.59
PXA1	YPL147W	HCS1	P34243	683 aa		5.14	□□□□□ -1.59
PXA1	YPL147W	PHO11	P35842	467 aa		5.14	□□□□□ -1.59
PXA1	YPL147W	PHO12	P38693	467 aa		5.14	□□□□□ -1.59
PXA1	YPL147W	RRM3	P38766	723 aa		5.14	□□□□□ -1.59
PXA1	YPL147W	YTA12	P40341	825 aa		5.14	□□□□□ -1.59
PXA1	YPL147W	AGE2	P40529	298 aa		5.14	□□□□□ -1.59
PXA1	YPL147W	YJL181W	P46987	611 aa		5.14	□□□□□ -1.59
PXA1	YPL147W	PSP2	P50109	593 aa	Known RBP	5.14	□□□□□ -1.59
PXA1	YPL147W	SAM37	P50110	327 aa		5.14	□□□□□ -1.59
PXA1	YPL147W	TOF1	P53840	1238 aa		5.14	□□□□□ -1.59
PXA1	YPL147W	HOT1	Q03213	719 aa		5.14	□□□□□ -1.59
PXA1	YPL147W	NUT2	Q06213	157 aa		5.14	□□□□□ -1.59
PXA1	YPL147W	BUG1	Q12191	341 aa		5.14	□□□□□ -1.59
PXA1	YPL147W	MED4	Q12343	284 aa		5.14	□□□□□ -1.59
PXA1	YPL147W	SDH2	P21801	266 aa		5.14	□□□□□ -1.59
PXA1	YPL147W	MSH1	P25846	959 aa		5.14	□□□□□ -1.59
PXA1	YPL147W	CDC12	P32468	407 aa	Known RBP	5.14	□□□□□ -1.59
PXA1	YPL147W	UTP11	P34247	250 aa	Predicted RBP	5.14	□□□□□ -1.59
PXA1	YPL147W	OLA1	P38219	394 aa	Known RBP	5.14	□□□□□ -1.59
PXA1	YPL147W	YRB2	P40517	327 aa		5.14	□□□□□ -1.59
PXA1	YPL147W	FPK1	P53739	893 aa		5.14	□□□□□ -1.59
PXA1	YPL147W	YNR061C	P53747	219 aa		5.14	□□□□□ -1.59
PXA1	YPL147W	YML108W	Q03759	105 aa		5.14	□□□□□ -1.59
PXA1	YPL147W	RVB1	Q03940	463 aa	Known RBP	5.14	□□□□□ -1.59
PXA1	YPL147W	ISR1	Q06098	443 aa	Known RBP	5.14	□□□□□ -1.59
PXA1	YPL147W	PDR8	Q06149	701 aa		5.14	□□□□□ -1.59
PXA1	YPL147W	EAF1	Q06337	982 aa		5.14	□□□□□ -1.59
PXA1	YPL147W	MLC2	Q06580	163 aa		5.14	□□□□□ -1.59
PXA1	YPL147W	MRL1	Q06815	381 aa		5.14	□□□□□ -1.59
PXA1	YPL147W	ACF2	Q12168	779 aa		5.14	□□□□□ -1.59
PXA1	YPL147W	CDC42	P19073	191 aa		5.13	□□□□□ -1.59
PXA1	YPL147W	CLB5	P30283	435 aa		5.13	□□□□□ -1.59
PXA1	YPL147W	UBC6	P33296	250 aa	Predicted RBP	5.13	□□□□□ -1.59
PXA1	YPL147W	NIC96	P34077	839 aa		5.13	□□□□□ -1.59
PXA1	YPL147W	RRP1	P35178	278 aa	Predicted RBP	5.13	□□□□□ -1.59
PXA1	YPL147W	DHR2	P36009	735 aa	Predicted RBP	5.13	□□□□□ -1.59
PXA1	YPL147W	HXT8	P40886	569 aa		5.13	□□□□□ -1.59
PXA1	YPL147W	APS3	P47064	194 aa		5.13	□□□□□ -1.59
PXA1	YPL147W	EGD1	Q02642	157 aa	Known RBP	5.13	□□□□□ -1.59
PXA1	YPL147W	YCG1	Q06680	1035 aa		5.13	□□□□□ -1.59
PXA1	YPL147W	ICL2	Q12031	575 aa		5.13	□□□□□ -1.59
PXA1	YPL147W	PFK27	Q12471	397 aa	Predicted RBP	5.13	□□□□□ -1.59
PXA1	YPL147W	SNF2	P22082	1703 aa		5.13	□□□□□ -1.59
PXA1	YPL147W	DBP2	P24783	546 aa	Known RBP	5.13	□□□□□ -1.59
PXA1	YPL147W	RER1	P25560	188 aa		5.13	□□□□□ -1.59
PXA1	YPL147W	PRP40	P33203	583 aa	Known RBP	5.13	□□□□□ -1.59
PXA1	YPL147W	TFC4	P33339	1025 aa		5.13	□□□□□ -1.59
PXA1	YPL147W	PMT1	P33775	817 aa		5.13	□□□□□ -1.59
PXA1	YPL147W	BCH2	P36122	765 aa		5.13	□□□□□ -1.59
PXA1	YPL147W	ATP3	P38077	311 aa	Known RBP	5.13	□□□□□ -1.59
PXA1	YPL147W	GEM1	P39722	662 aa		5.13	□□□□□ -1.59
PXA1	YPL147W	CAB2	P40506	365 aa		5.13	□□□□□ -1.59
PXA1	YPL147W	SKP2	P42843	763 aa		5.13	□□□□□ -1.59
PXA1	YPL147W	YDL183C	P48569	320 aa		5.13	□□□□□ -1.59
PXA1	YPL147W	DUS1	P53759	423 aa	Known RBP	5.13	□□□□□ -1.59
PXA1	YPL147W	UME1	Q03010	460 aa		5.13	□□□□□ -1.59
PXA1	YPL147W	RBS1	Q05672	457 aa	Known RBP	5.13	□□□□□ -1.59
PXA1	YPL147W	BUD7	Q08754	746 aa		5.13	□□□□□ -1.59
PXA1	YPL147W	VPS54	Q12071	889 aa		5.13	□□□□□ -1.59
PXA1	YPL147W	PAR32	Q12515	295 aa	Known RBP	5.13	□□□□□ -1.59
PXA1	YPL147W	CPA2	P03965	1118 aa	Known RBP	5.12	□□□□□ -1.59
PXA1	YPL147W	SRS2	P12954	1174 aa		5.12	□□□□□ -1.59
PXA1	YPL147W	PRE8	P23639	250 aa		5.12	□□□□□ -1.59
PXA1	YPL147W	SEC21	P32074	935 aa	Known RBP	5.12	□□□□□ -1.59
PXA1	YPL147W	CSE4	P36012	229 aa		5.12	□□□□□ -1.59
PXA1	YPL147W	NUP133	P36161	1157 aa		5.12	□□□□□ -1.59
PXA1	YPL147W	YBR071W	P38243	211 aa		5.12	□□□□□ -1.59
PXA1	YPL147W	YHL012W	P38709	493 aa		5.12	□□□□□ -1.59
PXA1	YPL147W	OSH3	P38713	996 aa	Known RBP	5.12	□□□□□ -1.59
PXA1	YPL147W	SMF2	P38778	549 aa		5.12	□□□□□ -1.59
PXA1	YPL147W	YJR061W	P40355	935 aa		5.12	□□□□□ -1.59
PXA1	YPL147W	UBP7	P40453	1071 aa		5.12	□□□□□ -1.59
PXA1	YPL147W	MDV1	P47025	714 aa		5.12	□□□□□ -1.59
PXA1	YPL147W	CTH1	P47976	325 aa		5.12	□□□□□ -1.59
PXA1	YPL147W	PAN2	P53010	1115 aa	Predicted RBP	5.12	□□□□□ -1.59
PXA1	YPL147W	MUB1	Q03162	620 aa		5.12	□□□□□ -1.59
PXA1	YPL147W	SEC10	Q06245	871 aa		5.12	□□□□□ -1.59
PXA1	YPL147W	ATG17	Q06410	417 aa		5.12	□□□□□ -1.59
PXA1	YPL147W	GNT1	Q12096	491 aa		5.12	□□□□□ -1.59
PXA1	YPL147W	SSC1	P0CS90	654 aa	Known RBP	5.12	□□□□□ -1.59
PXA1	YPL147W	ERR1	P0CX10	437 aa		5.12	□□□□□ -1.59
PXA1	YPL147W	ERR2	P0CX11	437 aa		5.12	□□□□□ -1.59
PXA1	YPL147W	STE6	P12866	1290 aa		5.12	□□□□□ -1.59
PXA1	YPL147W	FUS3	P16892	353 aa	Known RBP	5.12	□□□□□ -1.59
PXA1	YPL147W	AFT1	P22149	690 aa		5.12	□□□□□ -1.59
PXA1	YPL147W	CDC15	P27636	974 aa		5.12	□□□□□ -1.59
PXA1	YPL147W	CSE1	P33307	960 aa		5.12	□□□□□ -1.59
PXA1	YPL147W	MCM7	P38132	845 aa		5.12	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 84.1 ms