RNA–Protein interactions for RNA: YPL065W

VPS28, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene VPS28, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS28YPL065W BAP3P41815 604 aa6.08□□□□□ -1.44
VPS28YPL065W YJR096WP47137 282 aa6.08□□□□□ -1.44
VPS28YPL065W MTQ2Q03920 221 aaPredicted RBP6.08□□□□□ -1.44
VPS28YPL065W COG8Q04632 607 aa6.08□□□□□ -1.44
VPS28YPL065W TUB1P09733 447 aaKnown RBP6.07□□□□□ -1.44
VPS28YPL065W DOT6P40059 670 aaKnown RBP6.07□□□□□ -1.44
VPS28YPL065W TEX1P53851 422 aaKnown RBP6.07□□□□□ -1.44
VPS28YPL065W SMX3P54999 86 aaPredicted RBP6.07□□□□□ -1.44
VPS28YPL065W ASM4Q05166 528 aa6.07□□□□□ -1.44
VPS28YPL065W FAP7Q12055 197 aaPredicted RBP6.07□□□□□ -1.44
VPS28YPL065W SUT2Q12286 268 aa6.07□□□□□ -1.44
VPS28YPL065W Q0142Q9ZZW4 58 aa6.07□□□□□ -1.44
VPS28YPL065W PRP19P32523 503 aaKnown RBP6.06□□□□□ -1.44
VPS28YPL065W HSL7P38274 827 aa6.06□□□□□ -1.44
VPS28YPL065W CCT3P39077 534 aaKnown RBP6.06□□□□□ -1.44
VPS28YPL065W NPY1P53164 384 aa6.06□□□□□ -1.44
VPS28YPL065W YLR149CQ99296 730 aa6.06□□□□□ -1.44
VPS28YPL065W TOM20P35180 183 aa6.05□□□□□ -1.44
VPS28YPL065W YKR051WP36142 418 aa6.05□□□□□ -1.44
VPS28YPL065W GPP1P41277 250 aaKnown RBP6.05□□□□□ -1.44
VPS28YPL065W PRP31P49704 494 aaPredicted RBP6.05□□□□□ -1.44
VPS28YPL065W CCR4P31384 837 aaKnown RBP6.04□□□□□ -1.44
VPS28YPL065W HIR1P32479 840 aa6.04□□□□□ -1.44
VPS28YPL065W PEX2P32800 271 aa6.04□□□□□ -1.44
VPS28YPL065W APT2P36973 181 aa6.04□□□□□ -1.44
VPS28YPL065W RIX1P38883 763 aaPredicted RBP6.04□□□□□ -1.44
VPS28YPL065W CKB2P38930 258 aa6.04□□□□□ -1.44
VPS28YPL065W YJL206CP39529 758 aa6.04□□□□□ -1.44
VPS28YPL065W YFL052WP43551 465 aa6.04□□□□□ -1.44
VPS28YPL065W CTK1Q03957 528 aaKnown RBP6.04□□□□□ -1.44
VPS28YPL065W COQ11Q05892 277 aa6.04□□□□□ -1.44
VPS28YPL065W TMA17Q12513 150 aa6.04□□□□□ -1.44
VPS28YPL065W BNR1P40450 1375 aa6.04□□□□□ -1.44
VPS28YPL065W SNM1P40993 198 aa6.03□□□□□ -1.44
VPS28YPL065W BNA2P47125 453 aa6.03□□□□□ -1.44
VPS28YPL065W YJR120WP47157 116 aa6.03□□□□□ -1.44
VPS28YPL065W IMO32P53219 342 aa6.03□□□□□ -1.44
VPS28YPL065W ORC4P54791 529 aa6.03□□□□□ -1.44
VPS28YPL065W HFD1Q04458 532 aa6.03□□□□□ -1.44
VPS28YPL065W YKL033W-AQ86ZR7 236 aa6.03□□□□□ -1.44
VPS28YPL065W SIR3P06701 978 aa6.02□□□□□ -1.45
VPS28YPL065W PYC1P11154 1178 aaKnown RBP6.02□□□□□ -1.45
VPS28YPL065W NDC80P40460 691 aa6.02□□□□□ -1.45
VPS28YPL065W FOL1P53848 824 aa6.02□□□□□ -1.45
VPS28YPL065W APM1Q00776 475 aaPredicted RBP6.02□□□□□ -1.45
VPS28YPL065W RPN7Q06103 429 aaKnown RBP6.02□□□□□ -1.45
VPS28YPL065W TAF3Q12297 353 aa6.02□□□□□ -1.45
VPS28YPL065W YNL162W-AQ3E7A8 72 aa6.02□□□□□ -1.45
VPS28YPL065W APL2P36000 726 aaPredicted RBP6.01□□□□□ -1.45
VPS28YPL065W TRZ1P36159 838 aaPredicted RBP6.01□□□□□ -1.45
VPS28YPL065W ARG2P40360 574 aa6.01□□□□□ -1.45
VPS28YPL065W SPO11P23179 398 aa6□□□□□ -1.45
VPS28YPL065W CTR1P49573 406 aa6□□□□□ -1.45
VPS28YPL065W ARO10Q06408 635 aa6□□□□□ -1.45
VPS28YPL065W RPN13O13563 156 aa5.99□□□□□ -1.45
VPS28YPL065W ADY2P25613 283 aa5.99□□□□□ -1.45
VPS28YPL065W MVD1P32377 396 aaKnown RBP5.99□□□□□ -1.45
VPS28YPL065W EUG1P32474 517 aa5.99□□□□□ -1.45
VPS28YPL065W GLG1P36143 616 aa5.99□□□□□ -1.45
VPS28YPL065W ARG5,6Q01217 863 aa5.99□□□□□ -1.45
VPS28YPL065W MCM21Q06675 368 aa5.99□□□□□ -1.45
VPS28YPL065W ADE2P21264 571 aaKnown RBP5.98□□□□□ -1.45
VPS28YPL065W MNN4P36044 1178 aa5.98□□□□□ -1.45
VPS28YPL065W PAF1P38351 445 aa5.98□□□□□ -1.45
VPS28YPL065W TDA3P38758 523 aa5.98□□□□□ -1.45
VPS28YPL065W NUP60P39705 539 aa5.98□□□□□ -1.45
VPS28YPL065W OAF1P39720 1047 aaPredicted RBP5.98□□□□□ -1.45
VPS28YPL065W PAN2P53010 1115 aaPredicted RBP5.98□□□□□ -1.45
VPS28YPL065W ARP4P80428 489 aa5.98□□□□□ -1.45
VPS28YPL065W YTM1Q12024 460 aaPredicted RBP5.98□□□□□ -1.45
VPS28YPL065W YKR018CP36114 725 aa5.97□□□□□ -1.45
VPS28YPL065W YHR112CP38716 378 aa5.97□□□□□ -1.45
VPS28YPL065W FMO1P38866 432 aa5.97□□□□□ -1.45
VPS28YPL065W BDH2P39713 417 aa5.97□□□□□ -1.45
VPS28YPL065W GZF3P42944 551 aaKnown RBP5.97□□□□□ -1.45
VPS28YPL065W YGR153WP48238 217 aa5.97□□□□□ -1.45
VPS28YPL065W PCL10P53124 433 aa5.97□□□□□ -1.45
VPS28YPL065W MTL1P53214 551 aa5.97□□□□□ -1.45
VPS28YPL065W CLF1Q12309 687 aaPredicted RBP5.97□□□□□ -1.45
VPS28YPL065W MRC1P25588 1096 aa5.96□□□□□ -1.46
VPS28YPL065W SFB3P38810 929 aa5.96□□□□□ -1.46
VPS28YPL065W CCT7P42943 550 aaKnown RBP5.96□□□□□ -1.46
VPS28YPL065W RET2P43621 546 aa5.96□□□□□ -1.46
VPS28YPL065W HOF1Q05080 669 aa5.96□□□□□ -1.46
VPS28YPL065W DCS2Q12123 353 aa5.96□□□□□ -1.46
VPS28YPL065W YBR071WP38243 211 aa5.95□□□□□ -1.46
VPS28YPL065W MIP6P38760 659 aaKnown RBP5.95□□□□□ -1.46
VPS28YPL065W ATG4P53867 494 aa5.95□□□□□ -1.46
VPS28YPL065W ECM9Q02202 377 aa5.95□□□□□ -1.46
VPS28YPL065W LEE1Q02799 301 aaKnown RBP5.95□□□□□ -1.46
VPS28YPL065W DAL3P32459 195 aa5.94□□□□□ -1.46
VPS28YPL065W FLO10P36170 1169 aa5.94□□□□□ -1.46
VPS28YPL065W YEL020CP39994 560 aa5.94□□□□□ -1.46
VPS28YPL065W CCT5P40413 562 aaKnown RBP5.94□□□□□ -1.46
VPS28YPL065W MNN11P46985 422 aaKnown RBP5.94□□□□□ -1.46
VPS28YPL065W COG6P53959 839 aa5.94□□□□□ -1.46
VPS28YPL065W REC102Q02721 264 aa5.94□□□□□ -1.46
VPS28YPL065W RPS21BQ3E754 87 aaKnown RBP5.94□□□□□ -1.46
VPS28YPL065W ENP1P38333 483 aaKnown RBP5.93□□□□□ -1.46
VPS28YPL065W LYS9P38999 446 aa5.93□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 48.8 ms