RNA–Protein interactions for RNA: YPL019C

VTC3, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC3, Length 2,508 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC3	YPL019C	SMD2	Q06217	110 aa	Known RBP	2.7	□□□□□ -1.98
VTC3	YPL019C	TDA5	Q06417	326 aa	Known RBP	2.7	□□□□□ -1.98
VTC3	YPL019C	MRI1	Q06489	411 aa	Known RBP	2.7	□□□□□ -1.98
VTC3	YPL019C	RRD2	Q12461	358 aa		2.7	□□□□□ -1.98
VTC3	YPL019C	FMP27	Q06179	2628 aa		2.7	□□□□□ -1.98
VTC3	YPL019C	RPS9A	O13516	197 aa	Known RBP	2.69	□□□□□ -1.98
VTC3	YPL019C	ILV1	P00927	576 aa	Known RBP	2.69	□□□□□ -1.98
VTC3	YPL019C	CAN1	P04817	590 aa		2.69	□□□□□ -1.98
VTC3	YPL019C	DED1	P06634	604 aa	Known RBP	2.69	□□□□□ -1.98
VTC3	YPL019C	CLN3	P13365	580 aa		2.69	□□□□□ -1.98
VTC3	YPL019C	MET22	P32179	357 aa		2.69	□□□□□ -1.98
VTC3	YPL019C	CSE2	P33308	149 aa		2.69	□□□□□ -1.98
VTC3	YPL019C	CCL1	P37366	393 aa		2.69	□□□□□ -1.98
VTC3	YPL019C	YBR184W	P38299	523 aa		2.69	□□□□□ -1.98
VTC3	YPL019C	ARP1	P38696	384 aa		2.69	□□□□□ -1.98
VTC3	YPL019C	VID28	P40547	921 aa		2.69	□□□□□ -1.98
VTC3	YPL019C	RSM26	P47141	266 aa		2.69	□□□□□ -1.98
VTC3	YPL019C	HAS1	Q03532	505 aa	Known RBP	2.69	□□□□□ -1.98
VTC3	YPL019C	AIM33	Q04516	312 aa		2.69	□□□□□ -1.98
VTC3	YPL019C	COQ9	Q05779	260 aa		2.69	□□□□□ -1.98
VTC3	YPL019C	SYT1	Q06836	1226 aa		2.69	□□□□□ -1.98
VTC3	YPL019C	SDH5	Q08230	162 aa		2.69	□□□□□ -1.98
VTC3	YPL019C	PGA3	Q12746	312 aa	Known RBP	2.69	□□□□□ -1.98
VTC3	YPL019C	ERR1	P0CX10	437 aa		2.69	□□□□□ -1.98
VTC3	YPL019C	ERR2	P0CX11	437 aa		2.69	□□□□□ -1.98
VTC3	YPL019C	MKK2	P32491	506 aa		2.69	□□□□□ -1.98
VTC3	YPL019C	YKL097C	P34245	136 aa		2.69	□□□□□ -1.98
VTC3	YPL019C	ATG19	P35193	415 aa		2.69	□□□□□ -1.98
VTC3	YPL019C	ECM2	P38241	364 aa	Known RBP	2.69	□□□□□ -1.98
VTC3	YPL019C	OPY1	P38271	328 aa		2.69	□□□□□ -1.98
VTC3	YPL019C	RIM4	P38741	713 aa		2.69	□□□□□ -1.98
VTC3	YPL019C	AKR1	P39010	764 aa		2.69	□□□□□ -1.98
VTC3	YPL019C	YTA12	P40341	825 aa		2.69	□□□□□ -1.98
VTC3	YPL019C	FIS1	P40515	155 aa		2.69	□□□□□ -1.98
VTC3	YPL019C	YIR016W	P40572	265 aa		2.69	□□□□□ -1.98
VTC3	YPL019C	MAF1	P41910	395 aa		2.69	□□□□□ -1.98
VTC3	YPL019C	YGL081W	P53156	320 aa		2.69	□□□□□ -1.98
VTC3	YPL019C	DOT1	Q04089	582 aa	Known RBP	2.69	□□□□□ -1.98
VTC3	YPL019C	UTP5	Q04177	643 aa	Known RBP	2.69	□□□□□ -1.98
VTC3	YPL019C	MFB1	Q04922	465 aa		2.69	□□□□□ -1.98
VTC3	YPL019C	FAL1	Q12099	399 aa	Known RBP	2.69	□□□□□ -1.98
VTC3	YPL019C	TEL1	P38110	2787 aa		2.68	□□□□□ -1.98
VTC3	YPL019C	HMG2	P12684	1045 aa		2.68	□□□□□ -1.98
VTC3	YPL019C	AGP1	P25376	633 aa		2.68	□□□□□ -1.98
VTC3	YPL019C	RSA4	P25382	515 aa	Known RBP	2.68	□□□□□ -1.98
VTC3	YPL019C	TMT1	P32643	299 aa		2.68	□□□□□ -1.98
VTC3	YPL019C	BMH2	P34730	273 aa	Known RBP	2.68	□□□□□ -1.98
VTC3	YPL019C	VBA5	P36172	582 aa		2.68	□□□□□ -1.98
VTC3	YPL019C	RSP5	P39940	809 aa	Known RBP	2.68	□□□□□ -1.98
VTC3	YPL019C	SPO22	P40511	975 aa		2.68	□□□□□ -1.98
VTC3	YPL019C	PCI8	P40512	444 aa		2.68	□□□□□ -1.98
VTC3	YPL019C	YIR007W	P40566	764 aa		2.68	□□□□□ -1.98
VTC3	YPL019C	LYS5	P50113	272 aa		2.68	□□□□□ -1.98
VTC3	YPL019C	YGL138C	P53122	345 aa		2.68	□□□□□ -1.98
VTC3	YPL019C	SCW11	P53189	542 aa		2.68	□□□□□ -1.98
VTC3	YPL019C	RET3	P53600	189 aa		2.68	□□□□□ -1.98
VTC3	YPL019C	NCE103	P53615	221 aa		2.68	□□□□□ -1.98
VTC3	YPL019C	TIF35	Q04067	274 aa	Known RBP	2.68	□□□□□ -1.98
VTC3	YPL019C	LCB5	Q06147	687 aa	Known RBP	2.68	□□□□□ -1.98
VTC3	YPL019C	ESC8	Q08119	714 aa		2.68	□□□□□ -1.98
VTC3	YPL019C	PKH2	Q12236	1081 aa	Known RBP	2.68	□□□□□ -1.98
VTC3	YPL019C	GSY1	P23337	708 aa		2.68	□□□□□ -1.98
VTC3	YPL019C	PEX1	P24004	1043 aa		2.68	□□□□□ -1.98
VTC3	YPL019C	HCM1	P25364	564 aa		2.68	□□□□□ -1.98
VTC3	YPL019C	RAD27	P26793	382 aa		2.68	□□□□□ -1.98
VTC3	YPL019C	DPH2	P32461	534 aa		2.68	□□□□□ -1.98
VTC3	YPL019C	SQT1	P35184	431 aa		2.68	□□□□□ -1.98
VTC3	YPL019C	GCS1	P35197	352 aa		2.68	□□□□□ -1.98
VTC3	YPL019C	RRP14	P36080	434 aa	Known RBP	2.68	□□□□□ -1.98
VTC3	YPL019C	GAA1	P39012	614 aa		2.68	□□□□□ -1.98
VTC3	YPL019C	ACO2	P39533	789 aa		2.68	□□□□□ -1.98
VTC3	YPL019C	NUP82	P40368	713 aa		2.68	□□□□□ -1.98
VTC3	YPL019C	BFA1	P47113	574 aa		2.68	□□□□□ -1.98
VTC3	YPL019C	YGR130C	P53278	816 aa		2.68	□□□□□ -1.98
VTC3	YPL019C	DIP5	P53388	608 aa		2.68	□□□□□ -1.98
VTC3	YPL019C	DSE4	P53753	1117 aa		2.68	□□□□□ -1.98
VTC3	YPL019C	ADE12	P80210	433 aa	Known RBP	2.68	□□□□□ -1.98
VTC3	YPL019C	GIS4	Q04233	774 aa		2.68	□□□□□ -1.98
VTC3	YPL019C	FLC1	Q08967	793 aa		2.68	□□□□□ -1.98
VTC3	YPL019C	YOR022C	Q12204	715 aa		2.68	□□□□□ -1.98
VTC3	YPL019C	CEX1	Q12453	761 aa		2.68	□□□□□ -1.98
VTC3	YPL019C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	2.67	□□□□□ -1.98	RIP-Chip
VTC3	YPL019C	ATP1	P07251	545 aa	Known RBP	2.67	□□□□□ -1.98
VTC3	YPL019C	SRD1	P09007	221 aa		2.67	□□□□□ -1.98
VTC3	YPL019C	RPL40A	P0CH08	128 aa	Known RBP	2.67	□□□□□ -1.98
VTC3	YPL019C	RPL40B	P0CH09	128 aa	Known RBP	2.67	□□□□□ -1.98
VTC3	YPL019C	TCP1	P12612	559 aa	Known RBP	2.67	□□□□□ -1.98
VTC3	YPL019C	GLN3	P18494	730 aa		2.67	□□□□□ -1.98
VTC3	YPL019C	GAR1	P28007	205 aa	Known RBP	2.67	□□□□□ -1.98
VTC3	YPL019C	LYP1	P32487	611 aa		2.67	□□□□□ -1.98
VTC3	YPL019C	VPH1	P32563	840 aa	Known RBP	2.67	□□□□□ -1.98
VTC3	YPL019C	SKG6	P32900	734 aa	Predicted RBP	2.67	□□□□□ -1.98
VTC3	YPL019C	COY1	P34237	679 aa		2.67	□□□□□ -1.98
VTC3	YPL019C	TIM54	P47045	478 aa		2.67	□□□□□ -1.98
VTC3	YPL019C	TPO2	P53283	614 aa		2.67	□□□□□ -1.98
VTC3	YPL019C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	2.67	□□□□□ -1.98	not detected
VTC3	YPL019C	NAN1	Q02931	896 aa	Known RBP	2.67	□□□□□ -1.98
VTC3	YPL019C	YMR265C	Q03508	461 aa	Known RBP	2.67	□□□□□ -1.98
VTC3	YPL019C	NSE5	Q03718	556 aa		2.67	□□□□□ -1.98
VTC3	YPL019C	FMP25	Q08023	583 aa		2.67	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 21 ms