RNA–Protein interactions for RNA: YOR001W

RRP6, Transcript of Nuclear exosome exonuclease component, yeastyeast

Gene RRP6, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP6YOR001W SHR5P41912 237 aa2.56□□□□□ -2
RRP6YOR001W HIM1Q06674 414 aa2.56□□□□□ -2
RRP6YOR001W OPY2Q06810 360 aa2.56□□□□□ -2
RRP6YOR001W DIN7Q12086 430 aa2.56□□□□□ -2
RRP6YOR001W YLR122CQ12312 125 aa2.56□□□□□ -2
RRP6YOR001W MTF2P10849 440 aa2.55□□□□□ -2
RRP6YOR001W ACO1P19414 778 aaKnown RBP RIP-Chip data2.55□□□□□ -2not detected
RRP6YOR001W IMG2P25642 146 aaPredicted RBP2.55□□□□□ -2
RRP6YOR001W NAM7P30771 971 aaKnown RBP2.55□□□□□ -2
RRP6YOR001W SAP190P36123 1033 aa2.55□□□□□ -2
RRP6YOR001W PSY4P38193 441 aa2.55□□□□□ -2
RRP6YOR001W TOS1P38288 455 aa2.55□□□□□ -2
RRP6YOR001W SRP68P38687 599 aaKnown RBP2.55□□□□□ -2
RRP6YOR001W SWD1P39706 426 aa2.55□□□□□ -2
RRP6YOR001W STL1P39932 569 aa2.55□□□□□ -2
RRP6YOR001W SCS2P40075 244 aaKnown RBP2.55□□□□□ -2
RRP6YOR001W YFL052WP43551 465 aa2.55□□□□□ -2
RRP6YOR001W MNT2P53059 558 aa2.55□□□□□ -2
RRP6YOR001W YGR130CP53278 816 aa2.55□□□□□ -2
RRP6YOR001W CPR6P53691 371 aaKnown RBP2.55□□□□□ -2
RRP6YOR001W BRE4Q07660 1125 aa2.55□□□□□ -2
RRP6YOR001W PUF3Q07807 879 aaKnown RBP RIP-Chip data2.55□□□□□ -2not detected
RRP6YOR001W MED1Q12321 566 aa2.55□□□□□ -2
RRP6YOR001W RPS9AO13516 197 aaKnown RBP2.54□□□□□ -2
RRP6YOR001W RPS17AP02407 136 aaKnown RBP2.54□□□□□ -2
RRP6YOR001W RPS17BP14127 136 aaKnown RBP2.54□□□□□ -2
RRP6YOR001W CMP2P14747 604 aa2.54□□□□□ -2
RRP6YOR001W PHO81P17442 1178 aa2.54□□□□□ -2
RRP6YOR001W ADP1P25371 1049 aa2.54□□□□□ -2
RRP6YOR001W YCL049CP25577 312 aa2.54□□□□□ -2
RRP6YOR001W STE14P32584 239 aa2.54□□□□□ -2
RRP6YOR001W LAM1P38851 1228 aa2.54□□□□□ -2
RRP6YOR001W PUG1P40100 303 aa2.54□□□□□ -2
RRP6YOR001W YIL108WP40483 696 aaKnown RBP2.54□□□□□ -2
RRP6YOR001W MMM1P41800 426 aa2.54□□□□□ -2
RRP6YOR001W YGR012WP53206 393 aa2.54□□□□□ -2
RRP6YOR001W HMO1Q03973 246 aaKnown RBP2.54□□□□□ -2
RRP6YOR001W WHI4Q07655 649 aaKnown RBP2.54□□□□□ -2
RRP6YOR001W CLF1Q12309 687 aaPredicted RBP2.54□□□□□ -2
RRP6YOR001W CDC31P06704 161 aaKnown RBP2.54□□□□□ -2
RRP6YOR001W MSB1P21339 1137 aaKnown RBP2.54□□□□□ -2
RRP6YOR001W CHS3P29465 1165 aa2.54□□□□□ -2
RRP6YOR001W FRD1P32614 470 aaKnown RBP2.54□□□□□ -2
RRP6YOR001W APM3P38153 483 aa2.54□□□□□ -2
RRP6YOR001W POA1P38218 177 aa2.54□□□□□ -2
RRP6YOR001W RFC5P38251 354 aa2.54□□□□□ -2
RRP6YOR001W AXL2P38928 823 aa2.54□□□□□ -2
RRP6YOR001W STT3P39007 718 aaKnown RBP2.54□□□□□ -2
RRP6YOR001W VPS8P39702 1274 aa2.54□□□□□ -2
RRP6YOR001W SDP1P40479 209 aa2.54□□□□□ -2
RRP6YOR001W DPH1P40487 425 aaKnown RBP2.54□□□□□ -2
RRP6YOR001W SRB7P47822 140 aa2.54□□□□□ -2
RRP6YOR001W YNR071CP53757 342 aa2.54□□□□□ -2
RRP6YOR001W SLU7Q02775 382 aaKnown RBP2.54□□□□□ -2
RRP6YOR001W BLS1Q06071 122 aa2.54□□□□□ -2
RRP6YOR001W PSF3Q12146 194 aa2.54□□□□□ -2
RRP6YOR001W CYC7P00045 113 aa2.53□□□□□ -2
RRP6YOR001W SNF1P06782 633 aaKnown RBP2.53□□□□□ -2
RRP6YOR001W TUB3P09734 445 aaKnown RBP2.53□□□□□ -2
RRP6YOR001W YEL076C-AP0CX16 216 aa2.53□□□□□ -2
RRP6YOR001W YLR464WP0CX17 216 aa2.53□□□□□ -2
RRP6YOR001W HSF1P10961 833 aa2.53□□□□□ -2
RRP6YOR001W SAN1P22470 610 aa2.53□□□□□ -2
RRP6YOR001W TGL1P34163 548 aa2.53□□□□□ -2
RRP6YOR001W RRN3P36070 627 aa2.53□□□□□ -2
RRP6YOR001W MUD2P36084 527 aaKnown RBP2.53□□□□□ -2
RRP6YOR001W YBR138CP38277 524 aa2.53□□□□□ -2
RRP6YOR001W IFA38P38286 347 aa2.53□□□□□ -2
RRP6YOR001W YEL076CP39971 216 aa2.53□□□□□ -2
RRP6YOR001W CIT3P43635 486 aa2.53□□□□□ -2
RRP6YOR001W SET2P46995 733 aaKnown RBP2.53□□□□□ -2
RRP6YOR001W SSY5P47002 699 aa2.53□□□□□ -2
RRP6YOR001W IML2P47031 731 aa2.53□□□□□ -2
RRP6YOR001W INP52P50942 1183 aa2.53□□□□□ -2
RRP6YOR001W HOL1P53389 586 aa2.53□□□□□ -2
RRP6YOR001W MUS81Q04149 632 aaPredicted RBP2.53□□□□□ -2
RRP6YOR001W YKU80Q04437 629 aa2.53□□□□□ -2
RRP6YOR001W RSB1Q08417 382 aa2.53□□□□□ -2
RRP6YOR001W TRE1Q08919 783 aa2.53□□□□□ -2
RRP6YOR001W DBP10Q12389 995 aaKnown RBP2.53□□□□□ -2
RRP6YOR001W LPX1Q12405 387 aaKnown RBP2.53□□□□□ -2
RRP6YOR001W ERP4Q12450 207 aa2.53□□□□□ -2
RRP6YOR001W FOB1O13329 566 aa2.53□□□□□ -2
RRP6YOR001W TRP3P00937 484 aa2.53□□□□□ -2
RRP6YOR001W SPE1P08432 466 aa2.53□□□□□ -2
RRP6YOR001W GUK1P15454 187 aaKnown RBP2.53□□□□□ -2
RRP6YOR001W GFD2P25370 566 aaKnown RBP2.53□□□□□ -2
RRP6YOR001W AIM26P32858 118 aa2.53□□□□□ -2
RRP6YOR001W SET3P36124 751 aa2.53□□□□□ -2
RRP6YOR001W PTC7P38797 343 aa2.53□□□□□ -2
RRP6YOR001W URM1P40554 99 aaPredicted RBP2.53□□□□□ -2
RRP6YOR001W MND2P40577 368 aa2.53□□□□□ -2
RRP6YOR001W PFA3P42836 336 aa2.53□□□□□ -2
RRP6YOR001W YAP1802P53309 568 aa2.53□□□□□ -2
RRP6YOR001W SGD1Q06132 899 aa2.53□□□□□ -2
RRP6YOR001W ADY3Q07732 790 aa2.53□□□□□ -2
RRP6YOR001W TRM8Q12009 286 aa2.53□□□□□ -2
RRP6YOR001W SNU66Q12420 587 aaPredicted RBP2.53□□□□□ -2
RRP6YOR001W KCS1Q12494 1050 aa2.53□□□□□ -2
RRP6YOR001W VAS1P07806 1104 aaKnown RBP2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms