RNA–Protein interactions for RNA: YOL006C

TOP1, Transcript of Topoisomerase I, yeast

Gene TOP1, Length 2,310 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TOP1	YOL006C	PDH1	Q12428	516 aa	Known RBP	3.65	□□□□□ -1.82
TOP1	YOL006C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	3.65	□□□□□ -1.82	not detected
TOP1	YOL006C	ARG3	P05150	338 aa		3.65	□□□□□ -1.83
TOP1	YOL006C	PRT1	P06103	763 aa	Known RBP	3.65	□□□□□ -1.83
TOP1	YOL006C	THR1	P17423	357 aa	Known RBP	3.65	□□□□□ -1.83
TOP1	YOL006C	ATP12	P22135	325 aa		3.65	□□□□□ -1.83
TOP1	YOL006C	SMI1	P32566	505 aa		3.65	□□□□□ -1.83
TOP1	YOL006C	UIP5	P36137	443 aa		3.65	□□□□□ -1.83
TOP1	YOL006C	PGM2	P37012	569 aa	Known RBP	3.65	□□□□□ -1.83
TOP1	YOL006C	UTP9	P38882	575 aa	Known RBP	3.65	□□□□□ -1.83
TOP1	YOL006C	RPN10	P38886	268 aa	Known RBP	3.65	□□□□□ -1.83
TOP1	YOL006C	YHR202W	P38887	602 aa		3.65	□□□□□ -1.83
TOP1	YOL006C	CCT7	P42943	550 aa	Known RBP	3.65	□□□□□ -1.83
TOP1	YOL006C	CTF18	P49956	741 aa		3.65	□□□□□ -1.83
TOP1	YOL006C	MNP1	P53163	194 aa	Predicted RBP	3.65	□□□□□ -1.83
TOP1	YOL006C	PIL1	P53252	339 aa	Known RBP	3.65	□□□□□ -1.83
TOP1	YOL006C	FRK1	Q03002	865 aa	Predicted RBP	3.65	□□□□□ -1.83
TOP1	YOL006C	FRE6	Q12473	712 aa		3.65	□□□□□ -1.83
TOP1	YOL006C	GCN4	P03069	281 aa		3.64	□□□□□ -1.83
TOP1	YOL006C	CPA2	P03965	1118 aa	Known RBP	3.64	□□□□□ -1.83
TOP1	YOL006C	PET123	P17558	318 aa		3.64	□□□□□ -1.83
TOP1	YOL006C	MIH1	P23748	554 aa		3.64	□□□□□ -1.83
TOP1	YOL006C	STE50	P25344	346 aa		3.64	□□□□□ -1.83
TOP1	YOL006C	KIP1	P28742	1111 aa		3.64	□□□□□ -1.83
TOP1	YOL006C	PPQ1	P32945	549 aa		3.64	□□□□□ -1.83
TOP1	YOL006C	ADD66	P36040	267 aa		3.64	□□□□□ -1.83
TOP1	YOL006C	SDS22	P36047	338 aa		3.64	□□□□□ -1.83
TOP1	YOL006C	FAT1	P38225	669 aa		3.64	□□□□□ -1.83
TOP1	YOL006C	IFA38	P38286	347 aa		3.64	□□□□□ -1.83
TOP1	YOL006C	UME6	P39001	836 aa		3.64	□□□□□ -1.83
TOP1	YOL006C	LAM5	P43560	674 aa		3.64	□□□□□ -1.83
TOP1	YOL006C	PUS4	P48567	403 aa	Known RBP	3.64	□□□□□ -1.83
TOP1	YOL006C	UBC9	P50623	157 aa	Predicted RBP	3.64	□□□□□ -1.83
TOP1	YOL006C	ADA2	Q02336	434 aa		3.64	□□□□□ -1.83
TOP1	YOL006C	YPL107W	Q02873	248 aa		3.64	□□□□□ -1.83
TOP1	YOL006C	FDC1	Q03034	503 aa		3.64	□□□□□ -1.83
TOP1	YOL006C	YDR514C	Q04408	483 aa		3.64	□□□□□ -1.83
TOP1	YOL006C	CSR1	Q06705	408 aa	Known RBP	3.64	□□□□□ -1.83
TOP1	YOL006C	RIX7	Q07844	837 aa	Known RBP	3.64	□□□□□ -1.83
TOP1	YOL006C	AVO1	Q08236	1176 aa		3.64	□□□□□ -1.83
TOP1	YOL006C	MCH5	Q08777	521 aa		3.64	□□□□□ -1.83
TOP1	YOL006C	NPP1	P25353	742 aa		3.64	□□□□□ -1.83
TOP1	YOL006C	SED4	P25365	1065 aa		3.64	□□□□□ -1.83
TOP1	YOL006C	RRP7	P25368	297 aa	Predicted RBP	3.64	□□□□□ -1.83
TOP1	YOL006C	POT1	P27796	417 aa	Known RBP RIP-Chip data	3.64	□□□□□ -1.83	not detected
TOP1	YOL006C	NAM7	P30771	971 aa	Known RBP	3.64	□□□□□ -1.83
TOP1	YOL006C	SAC6	P32599	642 aa	Known RBP	3.64	□□□□□ -1.83
TOP1	YOL006C	YKL077W	P36081	392 aa		3.64	□□□□□ -1.83
TOP1	YOL006C	VRP1	P37370	817 aa		3.64	□□□□□ -1.83
TOP1	YOL006C	HSM3	P38348	480 aa		3.64	□□□□□ -1.83
TOP1	YOL006C	TIF5	P38431	405 aa	Known RBP	3.64	□□□□□ -1.83
TOP1	YOL006C	RTS1	P38903	757 aa		3.64	□□□□□ -1.83
TOP1	YOL006C	PSF2	P40359	213 aa		3.64	□□□□□ -1.83
TOP1	YOL006C	VNX1	P42839	908 aa		3.64	□□□□□ -1.83
TOP1	YOL006C	AGX1	P43567	385 aa		3.64	□□□□□ -1.83
TOP1	YOL006C	SGF73	P53165	657 aa		3.64	□□□□□ -1.83
TOP1	YOL006C	ENV11	P53246	860 aa		3.64	□□□□□ -1.83
TOP1	YOL006C	ERV25	P54837	211 aa	Known RBP	3.64	□□□□□ -1.83
TOP1	YOL006C	ARV1	Q06541	321 aa		3.64	□□□□□ -1.83
TOP1	YOL006C	ENV7	Q12003	364 aa		3.64	□□□□□ -1.83
TOP1	YOL006C	CWC2	Q12046	339 aa	Predicted RBP	3.64	□□□□□ -1.83
TOP1	YOL006C	PHO5	P00635	467 aa		3.63	□□□□□ -1.83
TOP1	YOL006C	YCK2	P23292	546 aa	Known RBP	3.63	□□□□□ -1.83
TOP1	YOL006C	SEC65	P29478	273 aa		3.63	□□□□□ -1.83
TOP1	YOL006C	RGD1	P38339	666 aa		3.63	□□□□□ -1.83
TOP1	YOL006C	YEL025C	P39991	1188 aa		3.63	□□□□□ -1.83
TOP1	YOL006C	EAF5	P39995	279 aa		3.63	□□□□□ -1.83
TOP1	YOL006C	CCM1	P48237	864 aa	Predicted RBP	3.63	□□□□□ -1.83
TOP1	YOL006C	NIT3	P49954	291 aa		3.63	□□□□□ -1.83
TOP1	YOL006C	SFB2	P53953	876 aa		3.63	□□□□□ -1.83
TOP1	YOL006C	RPT6	Q01939	405 aa	Known RBP	3.63	□□□□□ -1.83
TOP1	YOL006C	SNO4	Q04902	237 aa		3.63	□□□□□ -1.83
TOP1	YOL006C	PHO92	Q06390	306 aa		3.63	□□□□□ -1.83
TOP1	YOL006C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	3.63	□□□□□ -1.83	not detected
TOP1	YOL006C	HSP33	Q08914	237 aa	Known RBP	3.63	□□□□□ -1.83
TOP1	YOL006C	HSP32	Q08992	237 aa		3.63	□□□□□ -1.83
TOP1	YOL006C	PSF3	Q12146	194 aa		3.63	□□□□□ -1.83
TOP1	YOL006C	ADH4	P10127	382 aa		3.62	□□□□□ -1.83
TOP1	YOL006C	PRP28	P23394	588 aa		3.62	□□□□□ -1.83
TOP1	YOL006C	SPB1	P25582	841 aa	Predicted RBP	3.62	□□□□□ -1.83
TOP1	YOL006C	RSC6	P25632	483 aa		3.62	□□□□□ -1.83
TOP1	YOL006C	SSE1	P32589	693 aa	Known RBP	3.62	□□□□□ -1.83
TOP1	YOL006C	RMA1	P36001	430 aa	Known RBP	3.62	□□□□□ -1.83
TOP1	YOL006C	MIC60	P36112	540 aa		3.62	□□□□□ -1.83
TOP1	YOL006C	LAS1	P36146	502 aa	Predicted RBP	3.62	□□□□□ -1.83
TOP1	YOL006C	GND1	P38720	489 aa	Known RBP	3.62	□□□□□ -1.83
TOP1	YOL006C	OTU2	P38747	307 aa	Known RBP	3.62	□□□□□ -1.83
TOP1	YOL006C	SPT8	P38915	602 aa		3.62	□□□□□ -1.83
TOP1	YOL006C	YIL161W	P40449	235 aa	Known RBP	3.62	□□□□□ -1.83
TOP1	YOL006C	JJJ2	P46997	583 aa		3.62	□□□□□ -1.83
TOP1	YOL006C	YJR098C	P47139	656 aa		3.62	□□□□□ -1.83
TOP1	YOL006C	OGG1	P53397	376 aa	Predicted RBP	3.62	□□□□□ -1.83
TOP1	YOL006C	CUS1	Q02554	436 aa	Predicted RBP	3.62	□□□□□ -1.83
TOP1	YOL006C	OAZ1	Q02803	292 aa		3.62	□□□□□ -1.83
TOP1	YOL006C	UTP5	Q04177	643 aa	Known RBP	3.62	□□□□□ -1.83
TOP1	YOL006C	GYL1	Q04322	720 aa		3.62	□□□□□ -1.83
TOP1	YOL006C	AIM32	Q04689	311 aa		3.62	□□□□□ -1.83
TOP1	YOL006C	DBP9	Q06218	594 aa	Known RBP	3.62	□□□□□ -1.83
TOP1	YOL006C	RPS31	P05759	152 aa	Known RBP	3.62	□□□□□ -1.83
TOP1	YOL006C	TY1A-LR4	P0C2I8	440 aa	Known RBP	3.62	□□□□□ -1.83

Retrieved 100 of 5,963 RNA–protein pairs in 41.6 ms