RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeastyeast

Gene TPM1, Length 600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPM1YNL079C YLR149CQ99296 730 aa4.53□□□□□ -1.68
TPM1YNL079C Q0142Q9ZZW4 58 aa4.53□□□□□ -1.68
TPM1YNL079C YKR051WP36142 418 aa4.52□□□□□ -1.69
TPM1YNL079C MPT5P39016 859 aaKnown RBP RIP-Chip data4.52□□□□□ -1.69not detected
TPM1YNL079C UBP12P39538 1254 aa4.52□□□□□ -1.69
TPM1YNL079C DOT6P40059 670 aaKnown RBP4.52□□□□□ -1.69
TPM1YNL079C PFA3P42836 336 aa4.52□□□□□ -1.69
TPM1YNL079C PMT3P47190 753 aa4.52□□□□□ -1.69
TPM1YNL079C UBC9P50623 157 aaPredicted RBP4.52□□□□□ -1.69
TPM1YNL079C ASM4Q05166 528 aa4.52□□□□□ -1.69
TPM1YNL079C GUD1Q07729 489 aa4.52□□□□□ -1.69
TPM1YNL079C ENB1Q08299 606 aa4.52□□□□□ -1.69
TPM1YNL079C LAS17Q12446 633 aa4.52□□□□□ -1.69
TPM1YNL079C SEC3P33332 1336 aaKnown RBP4.51□□□□□ -1.69
TPM1YNL079C SSD1P24276 1250 aaKnown RBP RIP-Chip data4.51□□□□□ -1.69not detected
TPM1YNL079C CCR4P31384 837 aaKnown RBP4.51□□□□□ -1.69
TPM1YNL079C DCG1P32460 244 aa4.51□□□□□ -1.69
TPM1YNL079C GRX4P32642 244 aa4.51□□□□□ -1.69
TPM1YNL079C TYS1P36421 394 aaKnown RBP4.51□□□□□ -1.69
TPM1YNL079C MTR3P48240 250 aaPredicted RBP4.51□□□□□ -1.69
TPM1YNL079C UME1Q03010 460 aa4.51□□□□□ -1.69
TPM1YNL079C RPN7Q06103 429 aaKnown RBP4.51□□□□□ -1.69
TPM1YNL079C URN1Q06525 465 aaKnown RBP4.51□□□□□ -1.69
TPM1YNL079C TY3B-IQ7LHG5 1498 aaKnown RBP4.5□□□□□ -1.69
TPM1YNL079C CAD1P24813 409 aaKnown RBP4.5□□□□□ -1.69
TPM1YNL079C CTF13P35203 478 aa4.5□□□□□ -1.69
TPM1YNL079C YKR018CP36114 725 aa4.5□□□□□ -1.69
TPM1YNL079C PKH1Q03407 766 aa4.5□□□□□ -1.69
TPM1YNL079C ESC8Q08119 714 aa4.5□□□□□ -1.69
TPM1YNL079C YLR415CO13578 112 aa4.49□□□□□ -1.69
TPM1YNL079C TSR4P25040 408 aa4.49□□□□□ -1.69
TPM1YNL079C CTS1P29029 562 aa4.49□□□□□ -1.69
TPM1YNL079C NGG1P32494 702 aa4.49□□□□□ -1.69
TPM1YNL079C SHM2P37291 469 aaKnown RBP4.49□□□□□ -1.69
TPM1YNL079C MIP6P38760 659 aaKnown RBP4.49□□□□□ -1.69
TPM1YNL079C CKB2P38930 258 aa4.49□□□□□ -1.69
TPM1YNL079C YJR096WP47137 282 aa4.49□□□□□ -1.69
TPM1YNL079C YGR237CP50089 785 aa4.49□□□□□ -1.69
TPM1YNL079C GPG1P53130 126 aa4.49□□□□□ -1.69
TPM1YNL079C ERG5P54781 538 aa4.49□□□□□ -1.69
TPM1YNL079C TRM11Q12463 433 aa4.49□□□□□ -1.69
TPM1YNL079C MHP1P43638 1398 aa4.49□□□□□ -1.69
TPM1YNL079C NUP145P49687 1317 aa4.48□□□□□ -1.69
TPM1YNL079C PMA1P05030 918 aaKnown RBP4.48□□□□□ -1.69
TPM1YNL079C PFK1P16861 987 aaKnown RBP4.48□□□□□ -1.69
TPM1YNL079C ESL2P36168 1195 aa4.48□□□□□ -1.69
TPM1YNL079C TAF5P38129 798 aa4.48□□□□□ -1.69
TPM1YNL079C RPP1P38786 293 aa4.48□□□□□ -1.69
TPM1YNL079C YEN1P40028 759 aa4.48□□□□□ -1.69
TPM1YNL079C TAF1P46677 1066 aa4.48□□□□□ -1.69
TPM1YNL079C MRPS35P53292 345 aa4.48□□□□□ -1.69
TPM1YNL079C MTQ2Q03920 221 aaPredicted RBP4.48□□□□□ -1.69
TPM1YNL079C NUP192P47054 1683 aa4.48□□□□□ -1.69
TPM1YNL079C TRP4P07285 380 aaPredicted RBP4.47□□□□□ -1.69
TPM1YNL079C PRP19P32523 503 aaKnown RBP4.47□□□□□ -1.69
TPM1YNL079C MNN4P36044 1178 aa4.47□□□□□ -1.69
TPM1YNL079C ENP1P38333 483 aaKnown RBP4.47□□□□□ -1.69
TPM1YNL079C SIC1P38634 284 aa4.47□□□□□ -1.69
TPM1YNL079C YAP3P38749 330 aa4.47□□□□□ -1.69
TPM1YNL079C BUL1P48524 976 aa4.47□□□□□ -1.69
TPM1YNL079C PHO23P50947 330 aa4.47□□□□□ -1.69
TPM1YNL079C PCL10P53124 433 aa4.47□□□□□ -1.69
TPM1YNL079C ORC4P54791 529 aa4.47□□□□□ -1.69
TPM1YNL079C ARP4P80428 489 aa4.47□□□□□ -1.69
TPM1YNL079C SPT7P35177 1332 aa4.46□□□□□ -1.69
TPM1YNL079C YLR419WQ06698 1435 aaKnown RBP4.46□□□□□ -1.69
TPM1YNL079C HCM1P25364 564 aa4.46□□□□□ -1.7
TPM1YNL079C GPP1P41277 250 aaKnown RBP4.46□□□□□ -1.7
TPM1YNL079C YBP2P53169 641 aa4.46□□□□□ -1.7
TPM1YNL079C HFD1Q04458 532 aa4.46□□□□□ -1.7
TPM1YNL079C FAP7Q12055 197 aaPredicted RBP4.46□□□□□ -1.7
TPM1YNL079C NTO1Q12311 748 aa4.46□□□□□ -1.7
TPM1YNL079C HAP1P0CE41 1502 aa4.46□□□□□ -1.7
TPM1YNL079C YBR259WP38338 688 aa4.45□□□□□ -1.7
TPM1YNL079C GIP4P39732 760 aa4.45□□□□□ -1.7
TPM1YNL079C PRP31P49704 494 aaPredicted RBP4.45□□□□□ -1.7
TPM1YNL079C NRG1Q03125 231 aa4.45□□□□□ -1.7
TPM1YNL079C DCS2Q12123 353 aa4.45□□□□□ -1.7
TPM1YNL079C DEF1P35732 738 aaKnown RBP4.44□□□□□ -1.7
TPM1YNL079C SSZ1P38788 538 aaKnown RBP4.44□□□□□ -1.7
TPM1YNL079C FKH2P41813 862 aa4.44□□□□□ -1.7
TPM1YNL079C RET2P43621 546 aa4.44□□□□□ -1.7
TPM1YNL079C YJR039WP47107 1121 aa4.44□□□□□ -1.7
TPM1YNL079C BRE5P53741 515 aaKnown RBP4.44□□□□□ -1.7
TPM1YNL079C LEE1Q02799 301 aaKnown RBP4.44□□□□□ -1.7
TPM1YNL079C YTM1Q12024 460 aaPredicted RBP4.44□□□□□ -1.7
TPM1YNL079C TGL5Q12043 749 aa4.44□□□□□ -1.7
TPM1YNL079C BCK1Q01389 1478 aa4.43□□□□□ -1.7
TPM1YNL079C ADE2P21264 571 aaKnown RBP4.43□□□□□ -1.7
TPM1YNL079C YCR015CP25616 317 aa4.43□□□□□ -1.7
TPM1YNL079C TDA3P38758 523 aa4.43□□□□□ -1.7
TPM1YNL079C ECM1P39715 212 aa4.43□□□□□ -1.7
TPM1YNL079C OAF1P39720 1047 aaPredicted RBP4.43□□□□□ -1.7
TPM1YNL079C CCT5P40413 562 aaKnown RBP4.43□□□□□ -1.7
TPM1YNL079C GZF3P42944 551 aaKnown RBP4.43□□□□□ -1.7
TPM1YNL079C ARG5,6Q01217 863 aa4.43□□□□□ -1.7
TPM1YNL079C AIM39Q08223 395 aa4.43□□□□□ -1.7
TPM1YNL079C RAD9P14737 1309 aa4.43□□□□□ -1.7
TPM1YNL079C DNF3Q12674 1656 aa4.42□□□□□ -1.7
TPM1YNL079C SPE2P21182 396 aa4.42□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 37.2 ms